Wall clock time and date at job start Sun Mar 7 2021 09:01:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.46843 * 2 1 4 4 C 1.50708 * 109.47053 * 119.99439 * 2 1 3 5 5 C 1.38710 * 120.02410 * 75.02580 * 4 2 1 6 6 O 1.35894 * 120.05989 * 359.95088 * 5 4 2 7 7 C 1.42896 * 117.00422 * 180.02562 * 6 5 4 8 8 C 1.50696 * 109.47459 * 180.02562 * 7 6 5 9 9 O 1.21281 * 119.99933 * 359.97438 * 8 7 6 10 10 N 1.34779 * 120.00019 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99955 * 175.01543 * 10 8 7 12 12 C 1.53006 * 112.85096 * 293.62981 * 11 10 8 13 13 O 1.42895 * 109.46865 * 305.09330 * 12 11 10 14 14 C 1.53781 * 113.61612 * 64.82472 * 11 10 8 15 15 C 1.53781 * 87.08345 * 139.97835 * 14 11 10 16 16 H 1.09004 * 113.61065 * 89.11489 * 15 14 11 17 17 O 1.42896 * 113.61729 * 219.93660 * 15 14 11 18 18 C 1.53777 * 113.61377 * 162.32233 * 11 10 8 19 19 C 1.38755 * 119.88345 * 180.02562 * 5 4 2 20 20 C 1.38120 * 119.94922 * 359.95529 * 19 5 4 21 21 C 1.38295 * 120.05358 * 0.02562 * 20 19 5 22 22 C 1.38169 * 120.02702 * 255.00404 * 4 2 1 23 23 H 0.96703 * 113.99714 * 180.02562 * 1 2 3 24 24 H 1.08993 * 109.47053 * 239.99377 * 2 1 3 25 25 H 1.48492 * 110.00346 * 58.68049 * 3 2 1 26 26 H 1.48501 * 109.99840 * 180.02562 * 3 2 1 27 27 H 1.09003 * 109.46746 * 300.00666 * 7 6 5 28 28 H 1.08999 * 109.47444 * 59.99746 * 7 6 5 29 29 H 0.97003 * 119.99757 * 355.02221 * 10 8 7 30 30 H 1.09001 * 109.46962 * 65.09311 * 12 11 10 31 31 H 1.09001 * 109.46986 * 185.08869 * 12 11 10 32 32 H 0.96707 * 114.00124 * 180.02562 * 13 12 11 33 33 H 1.08997 * 113.61925 * 254.53182 * 14 11 10 34 34 H 1.08999 * 113.61075 * 25.43398 * 14 11 10 35 35 H 0.96695 * 114.00164 * 179.97438 * 17 15 14 36 36 H 1.08996 * 113.61945 * 334.57023 * 18 11 10 37 37 H 1.09004 * 113.61591 * 105.47441 * 18 11 10 38 38 H 1.07998 * 120.02798 * 180.02562 * 19 5 4 39 39 H 1.07997 * 119.97978 * 180.30342 * 20 19 5 40 40 H 1.07998 * 119.94592 * 179.97438 * 21 20 19 41 41 H 1.07994 * 119.97325 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.8701 -2.0940 1.3069 6 8 1.3564 -2.8107 0.2729 7 6 1.3242 -4.2316 0.4211 8 6 0.7269 -4.8522 -0.8155 9 8 0.3640 -4.1471 -1.7331 10 7 0.5960 -6.1908 -0.9016 11 6 -0.0831 -6.7877 -2.0543 12 6 -1.5732 -6.4448 -2.1091 13 8 -2.1937 -6.8193 -0.8776 14 6 0.6505 -6.5612 -3.3868 15 6 0.2783 -8.0090 -3.7475 16 1 -0.6849 -8.1000 -4.2498 17 8 1.3224 -8.7188 -4.4168 18 6 0.2133 -8.2857 -2.2362 19 6 2.3330 -2.7449 2.4415 20 6 2.8541 -2.0143 3.4914 21 6 2.9144 -0.6349 3.4126 22 6 2.4536 0.0161 2.2835 23 1 -0.3933 -0.8834 0.0004 24 1 1.7923 -0.5139 -0.8899 25 1 1.5354 2.4771 1.1920 26 1 3.5349 1.7702 -0.0006 27 1 2.3385 -4.6053 0.5611 28 1 0.7179 -4.4929 1.2883 29 1 0.9514 -6.7590 -0.2003 30 1 -1.6939 -5.3728 -2.2656 31 1 -2.0408 -6.9868 -2.9312 32 1 -3.1416 -6.6309 -0.8414 33 1 0.1759 -5.8163 -4.0254 34 1 1.7227 -6.4015 -3.2731 35 1 1.0944 -9.6301 -4.6459 36 1 1.1659 -8.5974 -1.8080 37 1 -0.6144 -8.9330 -1.9460 38 1 2.2868 -3.8222 2.5033 39 1 3.2190 -2.5207 4.3727 40 1 3.3219 -0.0652 4.2347 41 1 2.5014 1.0934 2.2245 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_2989392.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:11 Heat of formation + Delta-G solvation = -135.395682 kcal Electronic energy + Delta-G solvation = -26161.093262 eV Core-core repulsion = 22202.520676 eV Total energy + Delta-G solvation = -3958.572585 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.95428 -41.40173 -39.78131 -38.39214 -37.61199 -37.29142 -36.22158 -34.20806 -32.74117 -31.35228 -29.64514 -28.09443 -27.07354 -26.55490 -24.52520 -23.38395 -22.59660 -21.56901 -20.21384 -19.44712 -19.01935 -18.55101 -18.18786 -18.08593 -17.53697 -17.19223 -16.90022 -16.60574 -16.45236 -15.93374 -15.61982 -15.47580 -15.25084 -15.01002 -14.82451 -14.69389 -14.02443 -13.86635 -13.64839 -13.64370 -13.48017 -13.28774 -12.97245 -12.76723 -12.62434 -12.26238 -12.00833 -11.99332 -11.83234 -11.27881 -11.08688 -11.06230 -10.84048 -10.70141 -10.21798 -10.02886 -9.29428 -4.70719 0.16478 0.32059 1.32853 1.46847 1.50945 1.76695 2.06290 2.43306 2.62567 2.78242 3.08863 3.20072 3.42199 3.50769 3.58027 3.60895 3.73637 3.77225 3.83172 3.89935 3.97046 4.08574 4.12431 4.21052 4.23992 4.26130 4.43659 4.46651 4.55936 4.60772 4.63155 4.80888 4.89793 4.90267 4.96548 5.17076 5.28221 5.34445 5.42246 5.59588 6.15289 6.33161 6.48850 6.55481 6.75799 7.06228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.076 4.076 3 Si 0.748 3.252 4 C -0.138 4.138 5 C 0.138 3.862 6 O -0.288 6.288 7 C 0.040 3.960 8 C 0.521 3.479 9 O -0.510 6.510 10 N -0.705 5.705 11 C 0.160 3.840 12 C 0.082 3.918 13 O -0.568 6.568 14 C -0.119 4.119 15 C 0.078 3.922 16 H 0.088 0.912 17 O -0.555 6.555 18 C -0.163 4.163 19 C -0.206 4.206 20 C -0.075 4.075 21 C -0.147 4.147 22 C -0.083 4.083 23 H 0.367 0.633 24 H 0.076 0.924 25 H -0.253 1.253 26 H -0.250 1.250 27 H 0.093 0.907 28 H 0.096 0.904 29 H 0.404 0.596 30 H 0.065 0.935 31 H 0.059 0.941 32 H 0.384 0.616 33 H 0.086 0.914 34 H 0.099 0.901 35 H 0.382 0.618 36 H 0.099 0.901 37 H 0.084 0.916 38 H 0.131 0.869 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.764 -4.964 0.807 5.087 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.647 3.353 4 C -0.139 4.139 5 C 0.092 3.908 6 O -0.201 6.201 7 C -0.038 4.038 8 C 0.305 3.695 9 O -0.383 6.383 10 N -0.358 5.358 11 C 0.074 3.926 12 C 0.003 3.997 13 O -0.374 6.374 14 C -0.157 4.157 15 C 0.018 3.982 16 H 0.106 0.894 17 O -0.360 6.360 18 C -0.201 4.201 19 C -0.224 4.224 20 C -0.093 4.093 21 C -0.166 4.166 22 C -0.101 4.101 23 H 0.215 0.785 24 H 0.094 0.906 25 H -0.178 1.178 26 H -0.175 1.175 27 H 0.111 0.889 28 H 0.114 0.886 29 H 0.239 0.761 30 H 0.083 0.917 31 H 0.077 0.923 32 H 0.231 0.769 33 H 0.105 0.895 34 H 0.118 0.882 35 H 0.229 0.771 36 H 0.117 0.883 37 H 0.103 0.897 38 H 0.149 0.851 39 H 0.148 0.852 40 H 0.147 0.853 41 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.349 -2.751 0.587 2.835 hybrid contribution -0.645 -2.602 1.188 2.932 sum -0.296 -5.353 1.776 5.648 Atomic orbital electron populations 1.86680 1.16913 1.33386 1.97112 1.25210 0.84913 1.13266 0.95077 0.93016 0.78319 0.76642 0.87328 1.19728 1.04980 0.90677 0.98491 1.18788 0.94399 0.90609 0.86958 1.86095 1.77731 1.17367 1.38876 1.22483 1.02697 0.80820 0.97836 1.19949 0.79096 0.82461 0.87965 1.90761 1.47902 1.61059 1.38626 1.45567 1.59307 1.05989 1.24954 1.21374 0.90972 0.94008 0.86281 1.22259 0.90592 1.00228 0.86640 1.86418 1.27244 1.86790 1.36928 1.23371 1.02308 0.95395 0.94659 1.23226 0.91202 0.93305 0.90489 0.89438 1.86547 1.40681 1.29579 1.79216 1.23998 1.03695 0.94568 0.97876 1.21286 1.05990 1.00464 0.94691 1.21024 0.96502 0.93947 0.97831 1.21093 1.02345 0.94711 0.98413 1.20907 0.96954 0.99390 0.92800 0.78528 0.90633 1.17783 1.17470 0.88896 0.88616 0.76062 0.91660 0.92251 0.76856 0.89516 0.88217 0.77059 0.88264 0.89697 0.85087 0.85158 0.85253 0.85321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.23 12.65 -35.23 -0.45 -2.68 16 2 C -0.08 -0.25 2.33 36.01 0.08 -0.16 16 3 Si 0.75 1.13 30.41 -169.99 -5.17 -4.04 16 4 C -0.14 -0.49 5.28 -104.47 -0.55 -1.04 16 5 C 0.14 0.37 6.62 -39.22 -0.26 0.11 16 6 O -0.29 -0.77 8.57 -39.32 -0.34 -1.11 16 7 C 0.04 -0.02 5.22 36.00 0.19 0.16 16 8 C 0.52 0.70 7.56 -10.99 -0.08 0.62 16 9 O -0.51 -2.63 14.91 -14.35 -0.21 -2.84 16 10 N -0.70 0.61 5.12 -46.86 -0.24 0.37 16 11 C 0.16 -0.08 0.86 -131.01 -0.11 -0.19 16 12 C 0.08 -0.05 6.20 37.16 0.23 0.18 16 13 O -0.57 0.31 13.53 -35.23 -0.48 -0.17 16 14 C -0.12 -0.06 6.40 -25.92 -0.17 -0.22 16 15 C 0.08 -0.10 4.86 -25.92 -0.13 -0.22 16 16 H 0.09 -0.24 7.61 -51.93 -0.40 -0.64 16 17 O -0.55 0.07 13.67 -35.23 -0.48 -0.41 16 18 C -0.16 0.31 7.22 -25.92 -0.19 0.12 16 19 C -0.21 -0.16 9.04 -39.43 -0.36 -0.52 16 20 C -0.07 -0.04 10.04 -39.60 -0.40 -0.44 16 21 C -0.15 -0.22 10.04 -39.56 -0.40 -0.61 16 22 C -0.08 -0.24 8.66 -39.60 -0.34 -0.59 16 23 H 0.37 1.08 8.61 45.56 0.39 1.47 16 24 H 0.08 0.25 7.83 -51.93 -0.41 -0.16 16 25 H -0.25 -0.87 6.81 56.52 0.38 -0.48 16 26 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 27 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 28 H 0.10 -0.25 7.66 -51.93 -0.40 -0.64 16 29 H 0.40 -1.35 8.71 -40.82 -0.36 -1.70 16 30 H 0.07 0.08 7.21 -51.93 -0.37 -0.30 16 31 H 0.06 -0.14 7.32 -51.93 -0.38 -0.52 16 32 H 0.38 -1.57 9.12 45.56 0.42 -1.16 16 33 H 0.09 0.10 8.10 -51.93 -0.42 -0.33 16 34 H 0.10 0.18 8.14 -51.93 -0.42 -0.24 16 35 H 0.38 -1.65 9.12 45.56 0.42 -1.24 16 36 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.08 -0.19 8.10 -51.93 -0.42 -0.61 16 38 H 0.13 -0.26 6.30 -52.49 -0.33 -0.59 16 39 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 40 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 41 H 0.13 0.31 4.94 -52.49 -0.26 0.05 16 LS Contribution 343.79 15.07 5.18 5.18 Total: 0.00 -9.80 343.79 -8.48 -18.28 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -3.82 Total: -9.78 kcal Atomic # 6 Polarization: -0.33 SS G_CDS: -2.48 Total: -2.81 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.24 Total: 0.37 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.96 Total: -7.21 kcal Atomic # 14 Polarization: 1.13 SS G_CDS: -5.17 Total: -4.04 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -9.80 -8.48 -18.28 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_2989392.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.119 kcal (2) G-P(sol) polarization free energy of solvation -9.797 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds