Wall clock time and date at job start Sun Mar 7 2021 09:01:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47112 * 2 1 4 4 C 1.50705 * 109.47411 * 240.00212 * 2 1 3 5 5 C 1.38273 * 119.94010 * 300.00107 * 4 2 1 6 6 C 1.38143 * 120.05113 * 179.97438 * 5 4 2 7 7 C 1.38726 * 119.94835 * 359.97438 * 6 5 4 8 8 O 1.35905 * 120.05805 * 180.02562 * 7 6 5 9 9 C 1.42903 * 116.99978 * 179.97438 * 8 7 6 10 10 C 1.52998 * 109.46914 * 180.02562 * 9 8 7 11 11 C 1.50698 * 109.47070 * 180.02562 * 10 9 8 12 12 O 1.21279 * 119.99902 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00065 * 180.02562 * 11 10 9 14 14 C 1.46499 * 120.00160 * 175.01917 * 13 11 10 15 15 C 1.53007 * 112.84811 * 293.62602 * 14 13 11 16 16 O 1.42901 * 109.46821 * 305.09320 * 15 14 13 17 17 C 1.53780 * 113.61528 * 64.82011 * 14 13 11 18 18 C 1.53780 * 87.08142 * 139.98504 * 17 14 13 19 19 H 1.09000 * 113.61726 * 89.20159 * 18 17 14 20 20 O 1.42900 * 113.61527 * 220.02285 * 18 17 14 21 21 C 1.53777 * 113.61620 * 162.31852 * 14 13 11 22 22 C 1.38732 * 119.88768 * 0.27555 * 7 6 5 23 23 C 1.38149 * 119.94485 * 359.46924 * 22 7 6 24 24 H 0.96702 * 113.99770 * 60.00107 * 1 2 3 25 25 H 1.08996 * 109.47137 * 120.00069 * 2 1 3 26 26 H 1.48501 * 109.99866 * 60.00144 * 3 2 1 27 27 H 1.48503 * 110.00030 * 181.32038 * 3 2 1 28 28 H 1.08000 * 119.97195 * 0.02562 * 5 4 2 29 29 H 1.08000 * 120.02529 * 179.97438 * 6 5 4 30 30 H 1.08997 * 109.47273 * 300.00432 * 9 8 7 31 31 H 1.09002 * 109.46762 * 60.00409 * 9 8 7 32 32 H 1.09007 * 109.47352 * 300.00174 * 10 9 8 33 33 H 1.08998 * 109.47479 * 60.00063 * 10 9 8 34 34 H 0.97001 * 120.00056 * 355.01241 * 13 11 10 35 35 H 1.09002 * 109.46881 * 65.09506 * 15 14 13 36 36 H 1.08992 * 109.46801 * 185.09052 * 15 14 13 37 37 H 0.96700 * 113.99502 * 180.02562 * 16 15 14 38 38 H 1.08994 * 113.61876 * 254.52989 * 17 14 13 39 39 H 1.08998 * 113.61732 * 25.35256 * 17 14 13 40 40 H 0.96699 * 114.00476 * 179.97438 * 20 18 17 41 41 H 1.09000 * 113.61762 * 334.56928 * 21 14 13 42 42 H 1.09007 * 113.61203 * 105.47211 * 21 14 13 43 43 H 1.08001 * 120.03173 * 179.71798 * 22 7 6 44 44 H 1.07991 * 119.97657 * 180.22784 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5966 -2.0342 -1.4482 6 6 2.0555 -2.6874 -2.5756 7 6 2.8523 -2.0141 -3.4900 8 8 3.3045 -2.6544 -4.6002 9 6 4.1196 -1.8987 -5.4982 10 6 4.5294 -2.7803 -6.6796 11 6 5.3896 -1.9835 -7.6264 12 8 5.6489 -0.8246 -7.3806 13 7 5.8699 -2.5586 -8.7467 14 6 6.6139 -1.7563 -9.7208 15 6 5.7466 -0.6976 -10.4048 16 8 4.6071 -1.3250 -10.9965 17 6 7.9439 -1.2068 -9.1787 18 6 8.5476 -1.5283 -10.5561 19 1 8.4603 -0.7115 -11.2726 20 8 9.8684 -2.0696 -10.4900 21 6 7.4507 -2.5964 -10.7000 22 6 3.1910 -0.6874 -3.2667 23 6 2.7253 -0.0370 -2.1404 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5138 0.8899 26 1 1.5615 2.4678 1.2085 27 1 3.5346 1.7703 -0.0322 28 1 0.9753 -2.5576 -0.7366 29 1 1.7941 -3.7215 -2.7450 30 1 3.5572 -1.0397 -5.8642 31 1 5.0117 -1.5530 -4.9757 32 1 5.0918 -3.6395 -6.3140 33 1 3.6373 -3.1256 -7.2020 34 1 5.7230 -3.5038 -8.9079 35 1 5.4165 0.0337 -9.6669 36 1 6.3279 -0.1961 -11.1784 37 1 4.0116 -0.7122 -11.4492 38 1 7.9162 -0.1410 -8.9523 39 1 8.3636 -1.8011 -8.3671 40 1 10.2534 -2.2742 -11.3531 41 1 7.7362 -3.5715 -10.3053 42 1 7.0245 -2.6524 -11.7018 43 1 3.8150 -0.1623 -3.9748 44 1 2.9857 0.9968 -1.9679 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_4549602.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:16 Heat of formation + Delta-G solvation = -150.637367 kcal Electronic energy + Delta-G solvation = -27004.678248 eV Core-core repulsion = 22889.907115 eV Total energy + Delta-G solvation = -4114.771133 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.81122 -41.27420 -39.87875 -39.09512 -37.54320 -37.17549 -36.17089 -34.23199 -33.14223 -32.02626 -31.39531 -28.26731 -27.02024 -26.65417 -25.72364 -24.11541 -23.22624 -22.20620 -21.33419 -20.08075 -19.54964 -18.94700 -18.34116 -18.19322 -17.76397 -17.48159 -17.19767 -16.87429 -16.44325 -16.37795 -16.00729 -15.93140 -15.67893 -15.38866 -14.90954 -14.74035 -14.67562 -14.47602 -14.29071 -14.06380 -13.70422 -13.57184 -13.51988 -13.26499 -13.01771 -12.84211 -12.77631 -12.21057 -12.05401 -11.89521 -11.80646 -11.75390 -11.70065 -11.25515 -10.96913 -10.70338 -10.42873 -10.15058 -10.06293 -9.22678 -5.01999 0.26428 0.28745 1.31512 1.51466 1.61060 1.68897 1.93845 2.43595 2.64461 2.91990 3.23150 3.35403 3.53121 3.56238 3.64099 3.67817 3.71629 3.81645 3.86972 3.88424 3.98011 4.04443 4.22990 4.26722 4.33062 4.38907 4.44159 4.49966 4.53637 4.63567 4.64978 4.66370 4.70349 4.76016 4.89613 4.94577 4.95763 5.07979 5.16239 5.26869 5.46144 5.47699 5.70493 6.30459 6.45765 6.76576 6.77988 6.85192 7.14693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.066 4.066 3 Si 0.770 3.230 4 C -0.161 4.161 5 C -0.059 4.059 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.323 6.323 9 C 0.076 3.924 10 C -0.134 4.134 11 C 0.522 3.478 12 O -0.573 6.573 13 N -0.699 5.699 14 C 0.151 3.849 15 C 0.086 3.914 16 O -0.579 6.579 17 C -0.126 4.126 18 C 0.081 3.919 19 H 0.106 0.894 20 O -0.577 6.577 21 C -0.151 4.151 22 C -0.209 4.209 23 C -0.080 4.080 24 H 0.395 0.605 25 H 0.107 0.893 26 H -0.298 1.298 27 H -0.289 1.289 28 H 0.140 0.860 29 H 0.141 0.859 30 H 0.068 0.932 31 H 0.065 0.935 32 H 0.122 0.878 33 H 0.123 0.877 34 H 0.416 0.584 35 H 0.044 0.956 36 H 0.076 0.924 37 H 0.398 0.602 38 H 0.073 0.927 39 H 0.080 0.920 40 H 0.398 0.602 41 H 0.099 0.901 42 H 0.093 0.907 43 H 0.140 0.860 44 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.382 -0.474 -7.421 7.446 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.176 4.176 3 Si 0.677 3.323 4 C -0.162 4.162 5 C -0.077 4.077 6 C -0.178 4.178 7 C 0.077 3.923 8 O -0.237 6.237 9 C 0.000 4.000 10 C -0.173 4.173 11 C 0.310 3.690 12 O -0.453 6.453 13 N -0.351 5.351 14 C 0.065 3.935 15 C 0.007 3.993 16 O -0.387 6.387 17 C -0.165 4.165 18 C 0.022 3.978 19 H 0.123 0.877 20 O -0.386 6.386 21 C -0.189 4.189 22 C -0.228 4.228 23 C -0.097 4.097 24 H 0.245 0.755 25 H 0.124 0.876 26 H -0.226 1.226 27 H -0.216 1.216 28 H 0.158 0.842 29 H 0.159 0.841 30 H 0.087 0.913 31 H 0.083 0.917 32 H 0.140 0.860 33 H 0.141 0.859 34 H 0.253 0.747 35 H 0.063 0.937 36 H 0.094 0.906 37 H 0.248 0.752 38 H 0.092 0.908 39 H 0.099 0.901 40 H 0.249 0.751 41 H 0.117 0.883 42 H 0.112 0.888 43 H 0.158 0.842 44 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.504 -0.034 -5.505 5.528 hybrid contribution 0.052 -0.357 -0.527 0.639 sum 0.556 -0.391 -6.032 6.071 Atomic orbital electron populations 1.86455 1.17241 1.82148 1.50500 1.25044 0.85235 1.10358 0.96984 0.93764 0.77792 0.75918 0.84827 1.20334 1.01966 0.95671 0.98216 1.20970 0.97066 0.93698 0.95996 1.20672 1.00991 1.01558 0.94540 1.19187 0.94523 0.91484 0.87075 1.85962 1.65345 1.40821 1.31538 1.22426 0.94102 0.94093 0.89329 1.21432 1.01800 0.99642 0.94453 1.20563 0.79383 0.87191 0.81890 1.90706 1.60016 1.18995 1.75540 1.45697 1.55915 1.13612 1.19846 1.21452 0.89208 0.93195 0.89686 1.22188 0.87658 0.93286 0.96200 1.86388 1.37282 1.39824 1.75226 1.23333 0.93510 1.02136 0.97525 1.23286 0.81442 0.95704 0.97382 0.87663 1.86499 1.30190 1.85218 1.36666 1.23898 0.95497 0.99344 1.00171 1.21419 1.05824 0.94434 1.01106 1.20994 0.95934 0.99813 0.92995 0.75521 0.87557 1.22588 1.21609 0.84229 0.84111 0.91333 0.91690 0.85975 0.85915 0.74713 0.93735 0.90556 0.75228 0.90780 0.90093 0.75090 0.88266 0.88830 0.84212 0.83883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.69 12.77 -148.98 -1.90 -2.59 16 2 C -0.07 -0.06 2.82 71.24 0.20 0.14 16 3 Si 0.77 -0.39 29.78 68.60 2.04 1.65 16 4 C -0.16 -0.34 5.39 -19.85 -0.11 -0.45 16 5 C -0.06 -0.17 9.60 22.26 0.21 0.05 16 6 C -0.16 -0.60 9.99 22.36 0.22 -0.37 16 7 C 0.12 0.60 6.69 22.50 0.15 0.75 16 8 O -0.32 -1.37 10.14 -92.48 -0.94 -2.31 16 9 C 0.08 0.12 4.03 71.98 0.29 0.41 16 10 C -0.13 0.35 6.07 29.85 0.18 0.53 16 11 C 0.52 0.96 7.49 87.66 0.66 1.62 16 12 O -0.57 -5.04 14.40 -3.02 -0.04 -5.09 16 13 N -0.70 1.07 5.12 -420.54 -2.15 -1.08 16 14 C 0.15 -0.14 0.86 4.13 0.00 -0.14 16 15 C 0.09 -0.12 6.20 71.98 0.45 0.32 16 16 O -0.58 1.04 13.53 -148.98 -2.02 -0.98 16 17 C -0.13 -0.21 6.40 31.12 0.20 -0.01 16 18 C 0.08 -0.22 4.86 31.12 0.15 -0.07 16 19 H 0.11 -0.69 7.61 -2.39 -0.02 -0.71 16 20 O -0.58 0.21 13.67 -148.98 -2.04 -1.83 16 21 C -0.15 0.62 7.22 31.12 0.22 0.85 16 22 C -0.21 -0.70 9.04 22.37 0.20 -0.50 16 23 C -0.08 -0.13 8.66 22.25 0.19 0.06 16 24 H 0.39 -2.62 8.70 -74.06 -0.64 -3.26 16 25 H 0.11 0.21 7.96 -2.39 -0.02 0.19 16 26 H -0.30 -1.99 7.11 99.48 0.71 -1.28 16 27 H -0.29 -1.30 7.11 99.48 0.71 -0.60 16 28 H 0.14 0.13 8.06 -2.91 -0.02 0.11 16 29 H 0.14 0.19 8.06 -2.91 -0.02 0.17 16 30 H 0.07 0.15 7.63 -2.39 -0.02 0.14 16 31 H 0.06 0.19 7.61 -2.39 -0.02 0.17 16 32 H 0.12 -0.71 8.14 -2.38 -0.02 -0.73 16 33 H 0.12 -0.66 8.14 -2.39 -0.02 -0.68 16 34 H 0.42 -2.55 8.71 -92.71 -0.81 -3.36 16 35 H 0.04 0.12 7.21 -2.39 -0.02 0.10 16 36 H 0.08 -0.42 7.32 -2.39 -0.02 -0.44 16 37 H 0.40 -3.62 9.12 -74.06 -0.68 -4.29 16 38 H 0.07 0.25 8.10 -2.39 -0.02 0.23 16 39 H 0.08 0.41 8.14 -2.39 -0.02 0.39 16 40 H 0.40 -3.64 9.12 -74.06 -0.68 -4.32 16 41 H 0.10 -0.40 8.14 -2.39 -0.02 -0.42 16 42 H 0.09 -0.52 8.10 -2.38 -0.02 -0.54 16 43 H 0.14 0.21 6.30 -2.91 -0.02 0.19 16 44 H 0.14 -0.32 4.87 -2.92 -0.01 -0.34 16 Total: 0.00 -22.82 365.97 -5.51 -28.33 By element: Atomic # 1 Polarization: -17.60 SS G_CDS: -1.69 Total: -19.30 kcal Atomic # 6 Polarization: -0.04 SS G_CDS: 3.23 Total: 3.18 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -2.15 Total: -1.08 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -6.94 Total: -12.79 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: 2.04 Total: 1.65 kcal Total: -22.82 -5.51 -28.33 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4549602.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.308 kcal (2) G-P(sol) polarization free energy of solvation -22.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.129 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.329 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds