Wall clock time and date at job start Sun Mar 7 2021 09:01:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47099 * 2 1 4 4 C 1.50697 * 109.47006 * 119.99973 * 2 1 3 5 5 C 1.38242 * 119.97183 * 245.01677 * 4 2 1 6 6 C 1.38294 * 120.11268 * 180.02562 * 5 4 2 7 7 C 1.38129 * 120.05103 * 359.68952 * 6 5 4 8 8 C 1.38751 * 119.94290 * 0.58819 * 7 6 5 9 9 O 1.35903 * 120.05305 * 179.70162 * 8 7 6 10 10 C 1.42898 * 117.00132 * 359.72891 * 9 8 7 11 11 C 1.50694 * 109.47504 * 179.97438 * 10 9 8 12 12 C 1.38339 * 119.92989 * 270.02561 * 11 10 9 13 13 C 1.38377 * 120.29167 * 179.97438 * 12 11 10 14 14 C 1.37935 * 120.14972 * 359.97438 * 13 12 11 15 15 C 1.39602 * 119.84923 * 359.76675 * 14 13 12 16 16 C 1.47852 * 120.14391 * 180.25397 * 15 14 13 17 17 O 1.21552 * 119.99698 * 180.25766 * 16 15 14 18 18 N 1.34773 * 120.00051 * 0.25377 * 16 15 14 19 19 C 1.46500 * 120.00135 * 175.21195 * 18 16 15 20 20 C 1.52997 * 112.84837 * 303.76261 * 19 18 16 21 21 O 1.42899 * 109.47292 * 305.23907 * 20 19 18 22 22 C 1.53782 * 113.61351 * 74.95457 * 19 18 16 23 23 C 1.53784 * 87.07866 * 139.98075 * 22 19 18 24 24 H 1.09002 * 113.60914 * 89.20307 * 23 22 19 25 25 O 1.42898 * 113.61400 * 220.01762 * 23 22 19 26 26 C 1.53782 * 113.61622 * 172.56452 * 19 18 16 27 27 C 1.37987 * 119.92528 * 89.99764 * 11 10 9 28 28 C 1.38165 * 119.97369 * 65.00586 * 4 2 1 29 29 H 0.96691 * 114.00171 * 60.00050 * 1 2 3 30 30 H 1.08998 * 109.47018 * 240.00358 * 2 1 3 31 31 H 1.48505 * 109.99822 * 60.00118 * 3 2 1 32 32 H 1.48497 * 110.00137 * 181.31890 * 3 2 1 33 33 H 1.07995 * 119.94753 * 359.97438 * 5 4 2 34 34 H 1.07996 * 119.97463 * 179.97438 * 6 5 4 35 35 H 1.07996 * 120.02463 * 180.31927 * 7 6 5 36 36 H 1.09002 * 109.46961 * 59.99532 * 10 9 8 37 37 H 1.09002 * 109.47267 * 300.00403 * 10 9 8 38 38 H 1.07993 * 119.85515 * 359.95087 * 12 11 10 39 39 H 1.08001 * 119.92992 * 179.97438 * 13 12 11 40 40 H 1.08000 * 120.07533 * 180.02562 * 14 13 12 41 41 H 0.97004 * 119.99761 * 355.21721 * 18 16 15 42 42 H 1.09004 * 109.47449 * 65.24015 * 20 19 18 43 43 H 1.09001 * 109.47390 * 185.24138 * 20 19 18 44 44 H 0.96696 * 114.00456 * 179.97438 * 21 20 19 45 45 H 1.08996 * 113.61388 * 254.53492 * 22 19 18 46 46 H 1.08999 * 113.60983 * 25.35164 * 22 19 18 47 47 H 0.96701 * 114.00276 * 180.02562 * 25 23 22 48 48 H 1.09001 * 113.61294 * 334.56991 * 26 19 18 49 49 H 1.09000 * 113.61342 * 105.47187 * 26 19 18 50 50 H 1.07994 * 120.07446 * 0.03220 * 27 11 10 51 51 H 1.08007 * 120.02706 * 0.03879 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6384 -0.0116 2.1911 6 6 3.1012 -0.6607 3.3211 7 6 2.8522 -2.0081 3.4956 8 6 2.1478 -2.7130 2.5301 9 8 1.9068 -4.0401 2.6966 10 6 2.4131 -4.6470 3.8871 11 6 2.0514 -6.1099 3.8982 12 6 0.8610 -6.5222 4.4698 13 6 0.5212 -7.8635 4.4837 14 6 1.3682 -8.7986 3.9263 15 6 2.5684 -8.3887 3.3430 16 6 3.4786 -9.3849 2.7386 17 8 4.5252 -9.0255 2.2356 18 7 3.1479 -10.6914 2.7456 19 6 3.9971 -11.6656 2.0557 20 6 4.2032 -11.3321 0.5768 21 8 2.9324 -11.1891 -0.0609 22 6 5.3029 -11.9832 2.8033 23 6 5.0905 -13.4492 2.3904 24 1 5.5374 -13.7010 1.4286 25 8 5.4194 -14.3866 3.4175 26 6 3.5875 -13.1265 2.3064 27 6 2.9080 -7.0351 3.3375 28 6 1.6846 -2.0595 1.3977 29 1 -0.3933 0.4416 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5615 2.4679 1.2086 32 1 3.5346 1.7703 -0.0321 33 1 2.8304 1.0428 2.0585 34 1 3.6536 -0.1127 4.0700 35 1 3.2093 -2.5135 4.3807 36 1 1.9763 -4.1584 4.7580 37 1 3.4975 -4.5403 3.9165 38 1 0.1943 -5.7941 4.9076 39 1 -0.4094 -8.1790 4.9319 40 1 1.1016 -9.8451 3.9374 41 1 2.3475 -10.9866 3.2073 42 1 4.7607 -10.3996 0.4889 43 1 4.7618 -12.1360 0.0974 44 1 2.9865 -10.9764 -1.0026 45 1 6.1850 -11.5265 2.3546 46 1 5.2413 -11.8178 3.8789 47 1 5.2883 -15.3104 3.1637 48 1 3.0557 -13.2758 3.2462 49 1 3.0869 -13.5916 1.4572 50 1 3.8370 -6.7119 2.8916 51 1 1.1325 -2.6051 0.6466 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_4549630.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:26 Heat of formation + Delta-G solvation = -105.801897 kcal Electronic energy + Delta-G solvation = -34586.403136 eV Core-core repulsion = 29805.134034 eV Total energy + Delta-G solvation = -4781.269102 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -41.87107 -41.32612 -40.51939 -39.29940 -38.67171 -37.51109 -37.26343 -36.18655 -34.42148 -33.15953 -32.56797 -32.12046 -31.02327 -28.28016 -27.73057 -27.02761 -26.55318 -25.52272 -23.65277 -23.58372 -23.13116 -22.01240 -21.10716 -20.16242 -19.00292 -18.94700 -18.82413 -18.39807 -18.13737 -17.41477 -17.30865 -17.24197 -17.08871 -16.75842 -16.44196 -16.07801 -15.84624 -15.78578 -15.53500 -15.33716 -15.05396 -14.84354 -14.70033 -14.53343 -14.47890 -14.20970 -13.81964 -13.77416 -13.60906 -13.55150 -13.47798 -13.22016 -13.17882 -12.93158 -12.74000 -12.34828 -12.25858 -12.05421 -11.95125 -11.88389 -11.77382 -11.74421 -11.26204 -11.02825 -10.57172 -10.36383 -10.15869 -10.05330 -9.95007 -9.87486 -9.21726 -4.95978 -0.24530 0.15327 0.22949 0.42740 1.27591 1.65774 1.75521 1.98418 2.00545 2.30199 2.66202 2.86218 2.90278 3.15714 3.25376 3.38947 3.50654 3.53896 3.59932 3.65855 3.70983 3.80787 3.84652 3.94864 3.95665 3.98764 4.02965 4.12143 4.15883 4.23421 4.23957 4.30768 4.32119 4.45155 4.53352 4.56262 4.61784 4.65486 4.66621 4.69478 4.85822 4.87336 4.92381 4.99067 5.02354 5.17891 5.23725 5.26730 5.35837 5.37476 5.46452 5.47159 5.68277 5.73521 6.39748 6.48453 6.58224 6.60282 6.62822 7.22388 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.687 3.313 4 C -0.036 4.036 5 C -0.162 4.162 6 C -0.071 4.071 7 C -0.205 4.205 8 C 0.133 3.867 9 O -0.306 6.306 10 C 0.102 3.898 11 C -0.105 4.105 12 C -0.067 4.067 13 C -0.127 4.127 14 C -0.074 4.074 15 C -0.137 4.137 16 C 0.567 3.433 17 O -0.533 6.533 18 N -0.703 5.703 19 C 0.160 3.840 20 C 0.080 3.920 21 O -0.567 6.567 22 C -0.124 4.124 23 C 0.079 3.921 24 H 0.088 0.912 25 O -0.555 6.555 26 C -0.165 4.165 27 C -0.034 4.034 28 C -0.121 4.121 29 H 0.383 0.617 30 H 0.076 0.924 31 H -0.250 1.250 32 H -0.255 1.255 33 H 0.120 0.880 34 H 0.130 0.870 35 H 0.132 0.868 36 H 0.076 0.924 37 H 0.075 0.925 38 H 0.131 0.869 39 H 0.135 0.865 40 H 0.128 0.872 41 H 0.402 0.598 42 H 0.072 0.928 43 H 0.056 0.944 44 H 0.383 0.617 45 H 0.084 0.916 46 H 0.100 0.900 47 H 0.381 0.619 48 H 0.098 0.902 49 H 0.084 0.916 50 H 0.138 0.862 51 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.912 -1.362 -1.899 3.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.184 4.184 3 Si 0.588 3.412 4 C -0.036 4.036 5 C -0.180 4.180 6 C -0.089 4.089 7 C -0.223 4.223 8 C 0.088 3.912 9 O -0.220 6.220 10 C 0.027 3.973 11 C -0.105 4.105 12 C -0.085 4.085 13 C -0.145 4.145 14 C -0.093 4.093 15 C -0.140 4.140 16 C 0.355 3.645 17 O -0.411 6.411 18 N -0.355 5.355 19 C 0.073 3.927 20 C 0.002 3.998 21 O -0.372 6.372 22 C -0.163 4.163 23 C 0.019 3.981 24 H 0.105 0.895 25 O -0.361 6.361 26 C -0.203 4.203 27 C -0.053 4.053 28 C -0.140 4.140 29 H 0.230 0.770 30 H 0.094 0.906 31 H -0.175 1.175 32 H -0.179 1.179 33 H 0.137 0.863 34 H 0.148 0.852 35 H 0.150 0.850 36 H 0.094 0.906 37 H 0.094 0.906 38 H 0.149 0.851 39 H 0.153 0.847 40 H 0.146 0.854 41 H 0.238 0.762 42 H 0.090 0.910 43 H 0.075 0.925 44 H 0.230 0.770 45 H 0.103 0.897 46 H 0.118 0.882 47 H 0.229 0.771 48 H 0.116 0.884 49 H 0.103 0.897 50 H 0.156 0.844 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.756 -0.571 -0.487 1.065 hybrid contribution -0.221 -1.076 -0.235 1.124 sum -0.977 -1.647 -0.722 2.047 Atomic orbital electron populations 1.86501 1.17025 1.81854 1.49670 1.24734 0.85876 1.10531 0.97283 0.95367 0.80740 0.77854 0.87192 1.19114 0.96858 0.93000 0.94648 1.20804 1.02583 0.99160 0.95443 1.20863 0.97558 0.93803 0.96721 1.21309 1.04709 0.95807 1.00518 1.18984 0.94900 0.82881 0.94432 1.86168 1.74145 1.19787 1.41896 1.21599 0.99335 0.89514 0.86869 1.19397 0.95976 0.93461 1.01656 1.21324 0.94791 0.96378 0.96050 1.21131 1.00176 0.92738 1.00494 1.21383 0.92812 0.99943 0.95119 1.19890 0.96300 0.94074 1.03767 1.18190 0.85512 0.82080 0.78767 1.90748 1.24434 1.80055 1.45821 1.45652 1.28553 1.06252 1.55017 1.21364 0.92205 0.87954 0.91163 1.22270 0.85916 1.01437 0.90224 1.86428 1.29101 1.94158 1.27549 1.23441 0.97453 0.93171 1.02234 1.23234 0.93727 0.89738 0.91397 0.89464 1.86543 1.89697 1.19364 1.40458 1.24036 0.98531 0.93974 1.03725 1.21160 0.99137 0.91131 0.93848 1.20237 1.02770 0.93568 0.97422 0.76964 0.90575 1.17508 1.17942 0.86280 0.85187 0.85009 0.90617 0.90635 0.85087 0.84745 0.85408 0.76198 0.90994 0.92549 0.77006 0.89690 0.88190 0.77093 0.88359 0.89697 0.84389 0.84672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.55 12.81 -35.23 -0.45 -1.01 16 2 C -0.07 -0.06 2.79 36.00 0.10 0.04 16 3 Si 0.69 -0.35 29.85 -169.99 -5.07 -5.42 16 4 C -0.04 -0.12 5.38 -104.65 -0.56 -0.69 16 5 C -0.16 -0.52 8.67 -39.56 -0.34 -0.86 16 6 C -0.07 -0.15 10.04 -39.60 -0.40 -0.55 16 7 C -0.20 -0.43 9.04 -39.43 -0.36 -0.79 16 8 C 0.13 0.47 6.69 -39.22 -0.26 0.21 16 9 O -0.31 -1.05 10.12 -19.44 -0.20 -1.25 16 10 C 0.10 0.08 4.86 36.00 0.17 0.25 16 11 C -0.10 -0.14 5.50 -104.68 -0.58 -0.71 16 12 C -0.07 -0.01 9.69 -39.49 -0.38 -0.39 16 13 C -0.13 0.07 10.03 -39.64 -0.40 -0.32 16 14 C -0.07 0.01 9.54 -39.18 -0.37 -0.37 16 15 C -0.14 -0.30 5.87 -104.96 -0.62 -0.91 16 16 C 0.57 1.89 7.44 -12.33 -0.09 1.80 16 17 O -0.53 -3.30 14.50 5.32 0.08 -3.22 16 18 N -0.70 -0.70 5.11 -47.78 -0.24 -0.94 16 19 C 0.16 0.11 0.86 -131.01 -0.11 0.00 16 20 C 0.08 0.06 6.00 37.16 0.22 0.29 16 21 O -0.57 -0.64 13.53 -35.23 -0.48 -1.12 16 22 C -0.12 -0.13 7.03 -25.92 -0.18 -0.31 16 23 C 0.08 -0.05 4.86 -25.83 -0.13 -0.18 16 24 H 0.09 -0.19 7.62 -51.93 -0.40 -0.58 16 25 O -0.56 -0.15 13.67 -35.23 -0.48 -0.63 16 26 C -0.16 0.16 7.21 -25.83 -0.19 -0.03 16 27 C -0.03 -0.08 9.24 -39.18 -0.36 -0.45 16 28 C -0.12 -0.48 9.62 -39.44 -0.38 -0.86 16 29 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 30 H 0.08 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H -0.25 -0.64 7.05 56.52 0.40 -0.24 16 32 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 33 H 0.12 0.30 4.86 -52.49 -0.26 0.04 16 34 H 0.13 -0.02 8.06 -52.49 -0.42 -0.45 16 35 H 0.13 -0.03 6.30 -52.49 -0.33 -0.36 16 36 H 0.08 -0.07 7.59 -51.93 -0.39 -0.46 16 37 H 0.08 -0.02 7.62 -51.93 -0.40 -0.42 16 38 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 39 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 40 H 0.13 -0.33 6.42 -52.49 -0.34 -0.67 16 41 H 0.40 -0.47 6.71 -40.82 -0.27 -0.74 16 42 H 0.07 0.20 6.53 -51.93 -0.34 -0.14 16 43 H 0.06 -0.07 7.32 -51.93 -0.38 -0.45 16 44 H 0.38 -0.97 9.12 45.56 0.42 -0.56 16 45 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 46 H 0.10 0.21 8.14 -51.93 -0.42 -0.22 16 47 H 0.38 -1.50 9.12 45.56 0.42 -1.08 16 48 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 49 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 50 H 0.14 0.40 7.65 -52.49 -0.40 0.00 16 51 H 0.14 0.47 8.06 -52.48 -0.42 0.05 16 LS Contribution 422.38 15.07 6.37 6.37 Total: 0.00 -11.96 422.38 -10.96 -22.92 By element: Atomic # 1 Polarization: -5.59 SS G_CDS: -5.27 Total: -10.86 kcal Atomic # 6 Polarization: 0.37 SS G_CDS: -5.21 Total: -4.84 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.24 Total: -0.94 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -1.53 Total: -7.22 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.07 Total: -5.42 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -11.96 -10.96 -22.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4549630.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.887 kcal (2) G-P(sol) polarization free energy of solvation -11.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.843 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.959 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.802 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds