Wall clock time and date at job start Sun Mar 7 2021 09:01:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35991 * 117.00117 * 2 1 4 4 C 1.39152 * 120.07668 * 180.02562 * 3 2 1 5 5 O 1.35997 * 120.07122 * 359.95452 * 4 3 2 6 6 C 1.42900 * 116.99973 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.47198 * 180.02562 * 6 5 4 8 8 O 1.21282 * 120.00098 * 359.97438 * 7 6 5 9 9 N 1.34776 * 120.00250 * 180.02562 * 7 6 5 10 10 C 1.46499 * 120.00207 * 185.04614 * 9 7 6 11 11 C 1.53003 * 112.84768 * 66.02620 * 10 9 7 12 12 O 1.42906 * 109.47045 * 55.34743 * 11 10 9 13 13 C 1.53780 * 113.61400 * 197.33514 * 10 9 7 14 14 C 1.53775 * 87.07924 * 89.11557 * 13 10 9 15 15 H 1.09000 * 113.68982 * 139.99256 * 14 13 10 16 16 O 1.42901 * 113.61382 * 270.87898 * 14 13 10 17 17 C 1.53777 * 87.08430 * 25.43178 * 14 13 10 18 18 C 1.38567 * 119.85437 * 180.23115 * 4 3 2 19 19 C 1.38242 * 119.99953 * 359.49071 * 18 4 3 20 20 N 1.48007 * 119.92778 * 180.25032 * 19 18 4 21 21 O 1.21801 * 119.99881 * 0.26291 * 20 19 18 22 22 O 1.21796 * 120.00129 * 180.25587 * 20 19 18 23 23 C 1.38245 * 120.14425 * 0.51180 * 19 18 4 24 24 C 1.50706 * 119.92634 * 179.76698 * 23 19 18 25 25 O 1.42898 * 109.47243 * 74.97532 * 24 23 19 26 26 Si 1.86300 * 109.47173 * 194.97843 * 24 23 19 27 27 C 1.38243 * 120.14977 * 359.74308 * 23 19 18 28 28 H 1.09002 * 109.47120 * 299.99630 * 1 2 3 29 29 H 1.08997 * 109.47462 * 59.99980 * 1 2 3 30 30 H 1.08999 * 109.47082 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47362 * 59.99855 * 6 5 4 32 32 H 1.09004 * 109.47024 * 299.99873 * 6 5 4 33 33 H 0.97003 * 119.99620 * 5.04018 * 9 7 6 34 34 H 1.09002 * 109.46960 * 175.34450 * 11 10 9 35 35 H 1.08993 * 109.47074 * 295.34319 * 11 10 9 36 36 H 0.96700 * 113.99477 * 179.97438 * 12 11 10 37 37 H 1.08998 * 113.61488 * 203.66636 * 13 10 9 38 38 H 1.08998 * 113.61247 * 334.56241 * 13 10 9 39 39 H 0.96699 * 114.00077 * 277.50270 * 16 14 13 40 40 H 1.09000 * 113.61193 * 220.01729 * 17 14 13 41 41 H 1.09006 * 113.69021 * 89.12671 * 17 14 13 42 42 H 1.08001 * 119.99749 * 179.72291 * 18 4 3 43 43 H 1.09001 * 109.46647 * 314.97294 * 24 23 19 44 44 H 0.96698 * 113.99779 * 60.00217 * 25 24 23 45 45 H 1.48497 * 110.00002 * 179.97438 * 26 24 23 46 46 H 1.48497 * 109.99895 * 301.31536 * 26 24 23 47 47 H 1.07999 * 120.00115 * 180.02562 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0001 6 6 5.6003 0.3007 -0.0002 7 6 6.2519 -1.0581 -0.0003 8 8 5.5670 -2.0591 0.0001 9 7 7.5957 -1.1612 0.0002 10 6 8.2295 -2.4772 -0.1116 11 6 7.9792 -3.1441 -1.4657 12 8 8.4050 -2.2701 -2.5131 13 6 9.7056 -2.4886 0.3194 14 6 9.2063 -2.7907 1.7421 15 1 9.8173 -3.5192 2.2752 16 8 8.9382 -1.6194 2.5155 17 6 7.9535 -3.3978 1.0889 18 6 4.0602 2.5234 0.0043 19 6 3.3028 3.6799 -0.0010 20 7 3.9713 5.0004 -0.0014 21 8 5.1875 5.0672 -0.0019 22 8 3.3054 6.0201 -0.0013 23 6 1.9224 3.6057 -0.0004 24 6 1.1015 4.8696 -0.0009 25 8 1.1345 5.4585 -1.3024 26 14 -0.6596 4.4665 0.4540 27 6 1.2931 2.3748 0.0001 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 5.9065 0.8508 0.8896 32 1 5.9065 0.8502 -0.8904 33 1 8.1432 -0.3638 0.0744 34 1 8.5402 -4.0770 -1.5204 35 1 6.9153 -3.3529 -1.5766 36 1 8.2762 -2.6292 -3.4016 37 1 10.2832 -3.3005 -0.1223 38 1 10.1955 -1.5194 0.2251 39 1 9.7224 -1.2330 2.9289 40 1 7.0288 -3.1626 1.6160 41 1 8.0506 -4.4585 0.8572 42 1 5.1385 2.5840 0.0084 43 1 1.5131 5.5703 0.7256 44 1 0.7826 4.8895 -2.0006 45 1 -1.4793 5.7047 0.4577 46 1 -1.2219 3.4875 -0.5106 47 1 0.2146 2.3196 0.0001 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_4549636.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:37 Heat of formation + Delta-G solvation = -158.987520 kcal Electronic energy + Delta-G solvation = -37165.276871 eV Core-core repulsion = 31900.445021 eV Total energy + Delta-G solvation = -5264.831851 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.143 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -43.40883 -42.18371 -41.75085 -40.28906 -39.36636 -39.07614 -37.75169 -37.55729 -37.24338 -35.92367 -34.11685 -32.71281 -32.53974 -29.99836 -28.87979 -28.37439 -27.92911 -26.95133 -25.85668 -24.16624 -23.45051 -23.13096 -21.89091 -20.84507 -20.36251 -19.87588 -19.56574 -18.84939 -18.68784 -18.51627 -18.32618 -18.08932 -17.74359 -17.63933 -17.42788 -16.89398 -16.86862 -16.50385 -16.37021 -16.21317 -15.91043 -15.56212 -15.35198 -15.01847 -14.92684 -14.80198 -14.48918 -13.96804 -13.79214 -13.74266 -13.49493 -13.42534 -13.20509 -13.06519 -12.72505 -12.71149 -12.51237 -12.49898 -12.39519 -12.26728 -12.16144 -12.11915 -11.71845 -11.47174 -11.20101 -10.96788 -10.71961 -10.65647 -10.50945 -10.04290 -9.52387 -5.00495 -1.37172 -0.46512 0.15394 0.29465 1.12644 1.21447 1.41884 1.46167 1.84907 1.86055 1.92635 2.31028 2.95473 2.99216 3.11189 3.15317 3.23525 3.39562 3.45544 3.47474 3.51415 3.62983 3.77051 3.83958 3.90552 3.92030 4.03261 4.07367 4.17380 4.23250 4.30545 4.35898 4.39845 4.41403 4.58017 4.59536 4.65700 4.69618 4.74610 4.82320 4.85403 4.99369 5.04062 5.25428 5.47824 5.57321 6.02030 6.40784 6.42332 6.47703 6.75038 6.89406 7.09214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.001 4.001 2 O -0.307 6.307 3 C 0.170 3.830 4 C 0.100 3.900 5 O -0.289 6.289 6 C 0.030 3.970 7 C 0.520 3.480 8 O -0.560 6.560 9 N -0.676 5.676 10 C 0.150 3.850 11 C 0.075 3.925 12 O -0.581 6.581 13 C -0.148 4.148 14 C 0.084 3.916 15 H 0.093 0.907 16 O -0.567 6.567 17 C -0.140 4.140 18 C -0.111 4.111 19 C -0.042 4.042 20 N 0.036 4.964 21 O -0.193 6.193 22 O -0.156 6.156 23 C -0.033 4.033 24 C -0.103 4.103 25 O -0.529 6.529 26 Si 0.776 3.224 27 C -0.171 4.171 28 H 0.090 0.910 29 H 0.075 0.925 30 H 0.123 0.877 31 H 0.123 0.877 32 H 0.120 0.880 33 H 0.416 0.584 34 H 0.079 0.921 35 H 0.033 0.967 36 H 0.394 0.606 37 H 0.120 0.880 38 H 0.089 0.911 39 H 0.398 0.602 40 H 0.056 0.944 41 H 0.119 0.881 42 H 0.179 0.821 43 H 0.129 0.871 44 H 0.383 0.617 45 H -0.293 1.293 46 H -0.249 1.249 47 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.953 -6.013 1.559 6.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.219 6.219 3 C 0.121 3.879 4 C 0.053 3.947 5 O -0.201 6.201 6 C -0.048 4.048 7 C 0.306 3.694 8 O -0.438 6.438 9 N -0.328 5.328 10 C 0.063 3.937 11 C -0.004 4.004 12 O -0.389 6.389 13 C -0.186 4.186 14 C 0.025 3.975 15 H 0.111 0.889 16 O -0.375 6.375 17 C -0.178 4.178 18 C -0.130 4.130 19 C -0.127 4.127 20 N 0.550 4.450 21 O -0.402 6.402 22 O -0.372 6.372 23 C -0.035 4.035 24 C -0.210 4.210 25 O -0.336 6.336 26 Si 0.677 3.323 27 C -0.190 4.190 28 H 0.108 0.892 29 H 0.094 0.906 30 H 0.141 0.859 31 H 0.140 0.860 32 H 0.138 0.862 33 H 0.253 0.747 34 H 0.097 0.903 35 H 0.051 0.949 36 H 0.244 0.756 37 H 0.139 0.861 38 H 0.107 0.893 39 H 0.249 0.751 40 H 0.075 0.925 41 H 0.137 0.863 42 H 0.196 0.804 43 H 0.146 0.854 44 H 0.232 0.768 45 H -0.221 1.221 46 H -0.174 1.174 47 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges -0.788 -7.012 1.925 7.314 hybrid contribution 1.161 0.853 -1.570 2.131 sum 0.373 -6.159 0.355 6.180 Atomic orbital electron populations 1.23758 0.74881 1.06997 1.03804 1.86326 1.24638 1.24620 1.86285 1.18650 0.89044 0.86374 0.93795 1.17997 0.88845 0.85148 1.02747 1.86294 1.18269 1.26889 1.88679 1.22827 0.78872 0.96442 1.06615 1.20157 0.82917 0.90362 0.76006 1.90732 1.63789 1.39315 1.49986 1.45109 1.04860 1.09549 1.73320 1.21401 0.95460 0.83899 0.92920 1.22459 0.98370 0.92848 0.86727 1.86401 1.87030 1.46914 1.18524 1.23909 0.93206 1.04979 0.96459 1.22713 0.95987 0.87980 0.90860 0.88947 1.86455 1.39132 1.43442 1.68485 1.23461 0.98756 1.00254 0.95334 1.20882 1.02881 0.88318 1.00952 1.20527 0.92713 0.81923 1.17520 1.43677 1.00811 1.03352 0.97199 1.94516 0.96519 1.94108 1.55039 1.94565 1.64422 1.25329 1.52930 1.20115 0.90887 0.97474 0.95065 1.25812 1.11826 0.93691 0.89661 1.86771 1.85403 1.44988 1.16411 0.94205 0.69999 0.79804 0.88310 1.21225 1.02223 0.88320 1.07195 0.89191 0.90639 0.85904 0.85966 0.86202 0.74703 0.90323 0.94895 0.75632 0.86134 0.89261 0.75103 0.92546 0.86276 0.80366 0.85382 0.76789 1.22066 1.17398 0.79448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.01 9.81 113.37 1.11 1.12 16 2 O -0.31 -0.57 10.28 -79.59 -0.82 -1.39 16 3 C 0.17 0.19 6.70 22.57 0.15 0.34 16 4 C 0.10 0.31 6.70 22.57 0.15 0.46 16 5 O -0.29 -1.86 9.45 -67.10 -0.63 -2.49 16 6 C 0.03 0.01 5.22 71.24 0.37 0.38 16 7 C 0.52 3.02 7.46 87.66 0.65 3.67 16 8 O -0.56 -8.21 14.39 16.00 0.23 -7.98 16 9 N -0.68 -0.43 4.53 -420.54 -1.91 -2.34 16 10 C 0.15 0.01 0.75 4.13 0.00 0.01 16 11 C 0.07 0.05 6.27 71.98 0.45 0.50 16 12 O -0.58 -0.27 13.54 -148.98 -2.02 -2.29 16 13 C -0.15 0.82 7.20 31.12 0.22 1.05 16 14 C 0.08 -0.33 5.28 31.12 0.16 -0.17 16 15 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 16 O -0.57 1.40 13.09 -148.98 -1.95 -0.55 16 17 C -0.14 -0.13 6.78 31.12 0.21 0.08 16 18 C -0.11 -0.21 8.54 22.35 0.19 -0.02 16 19 C -0.04 -0.20 6.84 36.38 0.25 0.05 16 20 N 0.04 0.38 4.45 -46.46 -0.21 0.17 16 21 O -0.19 -2.34 18.44 18.89 0.35 -1.99 16 22 O -0.16 -2.04 14.62 25.11 0.37 -1.67 16 23 C -0.03 -0.02 5.26 -19.86 -0.10 -0.12 16 24 C -0.10 -0.07 1.74 71.24 0.12 0.05 16 25 O -0.53 -2.10 11.80 -129.63 -1.53 -3.63 16 26 Si 0.78 -3.94 30.24 68.60 2.07 -1.86 16 27 C -0.17 0.54 7.65 22.35 0.17 0.71 16 28 H 0.09 -1.09 7.66 -2.39 -0.02 -1.11 16 29 H 0.08 -0.77 7.66 -2.39 -0.02 -0.79 16 30 H 0.12 -1.17 8.14 -2.39 -0.02 -1.19 16 31 H 0.12 -0.60 7.65 -2.39 -0.02 -0.62 16 32 H 0.12 -0.54 7.67 -2.38 -0.02 -0.56 16 33 H 0.42 -1.71 8.67 -92.71 -0.80 -2.51 16 34 H 0.08 -0.32 8.09 -2.39 -0.02 -0.34 16 35 H 0.03 0.20 7.18 -2.39 -0.02 0.18 16 36 H 0.39 -2.58 9.12 -74.06 -0.68 -3.25 16 37 H 0.12 -1.01 8.06 -2.39 -0.02 -1.03 16 38 H 0.09 -0.58 8.09 -2.39 -0.02 -0.59 16 39 H 0.40 -4.32 9.12 -74.06 -0.68 -5.00 16 40 H 0.06 0.48 7.18 -2.39 -0.02 0.46 16 41 H 0.12 -0.33 8.10 -2.38 -0.02 -0.35 16 42 H 0.18 -0.31 5.85 -2.91 -0.02 -0.33 16 43 H 0.13 0.41 6.07 -2.39 -0.01 0.39 16 44 H 0.38 -1.40 8.70 -74.06 -0.64 -2.04 16 45 H -0.29 -0.94 7.11 99.48 0.71 -0.23 16 46 H -0.25 1.54 6.68 99.48 0.66 2.21 16 47 H 0.19 -1.68 3.09 -2.91 -0.01 -1.69 16 Total: 0.00 -33.41 395.10 -3.61 -37.02 By element: Atomic # 1 Polarization: -17.43 SS G_CDS: -1.69 Total: -19.12 kcal Atomic # 6 Polarization: 4.00 SS G_CDS: 4.13 Total: 8.12 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -2.11 Total: -2.17 kcal Atomic # 8 Polarization: -15.99 SS G_CDS: -6.00 Total: -21.99 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.07 Total: -1.86 kcal Total: -33.41 -3.61 -37.02 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4549636.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.967 kcal (2) G-P(sol) polarization free energy of solvation -33.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.020 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds