Wall clock time and date at job start Sun Mar 7 2021 09:01:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47262 * 2 1 4 4 C 1.50704 * 109.46996 * 240.00043 * 2 1 3 5 5 C 1.38246 * 119.96886 * 120.01746 * 4 2 1 6 6 C 1.38292 * 120.10695 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05540 * 359.68571 * 6 5 4 8 8 C 1.38755 * 119.94549 * 0.59094 * 7 6 5 9 9 O 1.35905 * 120.05425 * 179.69975 * 8 7 6 10 10 C 1.42895 * 117.00120 * 359.72704 * 9 8 7 11 11 C 1.50695 * 109.47068 * 179.97438 * 10 9 8 12 12 O 1.21285 * 120.00263 * 359.97438 * 11 10 9 13 13 N 1.34780 * 120.00238 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00053 * 185.14714 * 13 11 10 15 15 C 1.52996 * 112.85139 * 64.84392 * 14 13 11 16 16 O 1.42900 * 109.47341 * 44.29951 * 15 14 13 17 17 C 1.53786 * 113.69004 * 196.11320 * 14 13 11 18 18 C 1.53784 * 87.08221 * 89.12864 * 17 14 13 19 19 H 1.08994 * 113.69333 * 139.99694 * 18 17 14 20 20 O 1.42898 * 113.60993 * 270.88578 * 18 17 14 21 21 C 1.53786 * 113.61405 * 293.64832 * 14 13 11 22 22 C 1.38163 * 119.97167 * 300.00028 * 4 2 1 23 23 H 0.96701 * 113.99908 * 299.99360 * 1 2 3 24 24 H 1.08997 * 109.47611 * 120.00297 * 2 1 3 25 25 H 1.48500 * 110.00050 * 300.00486 * 3 2 1 26 26 H 1.48495 * 109.99771 * 61.31956 * 3 2 1 27 27 H 1.08001 * 119.94483 * 359.97438 * 5 4 2 28 28 H 1.07998 * 119.97122 * 179.97438 * 6 5 4 29 29 H 1.08003 * 120.02958 * 180.31887 * 7 6 5 30 30 H 1.09007 * 109.47158 * 60.00187 * 10 9 8 31 31 H 1.08995 * 109.47253 * 300.00206 * 10 9 8 32 32 H 0.96997 * 119.99806 * 5.15050 * 13 11 10 33 33 H 1.09001 * 109.47431 * 164.30218 * 15 14 13 34 34 H 1.08998 * 109.47074 * 284.29935 * 15 14 13 35 35 H 0.96700 * 114.00428 * 179.97438 * 16 15 14 36 36 H 1.08998 * 113.61512 * 203.67512 * 17 14 13 37 37 H 1.08995 * 113.60991 * 334.57975 * 17 14 13 38 38 H 0.96706 * 114.00181 * 277.49356 * 20 18 17 39 39 H 1.09002 * 113.61560 * 25.34683 * 21 14 13 40 40 H 1.09003 * 113.61549 * 156.17332 * 21 14 13 41 41 H 1.07999 * 120.02948 * 0.04461 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7263 -0.0381 -2.1399 6 6 3.1893 -0.6873 -3.2698 7 6 2.8635 -2.0116 -3.4890 8 6 2.0610 -2.6869 -2.5806 9 8 1.7341 -3.9882 -2.7972 10 6 2.2467 -4.5970 -3.9840 11 6 1.7841 -6.0295 -4.0537 12 8 1.0847 -6.4845 -3.1735 13 7 2.1485 -6.8055 -5.0938 14 6 1.6085 -8.1614 -5.2205 15 6 0.0958 -8.1795 -5.4493 16 8 -0.2510 -7.1904 -6.4206 17 6 2.3908 -9.0487 -6.2032 18 6 3.2737 -9.4546 -5.0113 19 1 3.5413 -10.5111 -5.0043 20 8 4.3987 -8.5959 -4.8138 21 6 2.0749 -9.1166 -4.1093 22 6 1.5971 -2.0332 -1.4486 23 1 -0.3933 0.4416 0.7651 24 1 1.7924 -0.5138 0.8899 25 1 1.5614 2.4679 -1.2084 26 1 1.5879 2.4585 1.2242 27 1 2.9863 0.9960 -1.9677 28 1 3.8099 -0.1599 -3.9790 29 1 3.2296 -2.5197 -4.3689 30 1 3.3362 -4.5678 -3.9659 31 1 1.8832 -4.0545 -4.8567 32 1 2.7682 -6.4662 -5.7583 33 1 -0.2055 -9.1633 -5.8090 34 1 -0.4160 -7.9630 -4.5116 35 1 -1.1970 -7.1457 -6.6161 36 1 1.8035 -9.8711 -6.6116 37 1 2.9238 -8.4863 -6.9698 38 1 5.1559 -8.8035 -5.3784 39 1 2.3530 -8.6091 -3.1855 40 1 1.4005 -9.9569 -3.9442 41 1 0.9756 -2.5578 -0.7380 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341542_4860298.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:52 Heat of formation + Delta-G solvation = -127.853666 kcal Electronic energy + Delta-G solvation = -25773.237920 eV Core-core repulsion = 21814.992381 eV Total energy + Delta-G solvation = -3958.245539 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.83359 -41.14250 -39.62418 -38.59508 -37.56416 -37.27981 -35.93284 -33.96374 -32.51876 -31.54386 -29.44002 -28.30129 -27.03721 -26.71015 -23.70745 -23.55268 -22.43746 -21.43153 -20.36231 -19.04032 -18.55314 -18.47216 -18.30118 -17.97451 -17.30566 -17.27228 -16.77156 -16.74521 -16.43469 -15.81965 -15.69351 -15.37967 -15.32264 -14.85800 -14.69541 -14.47614 -13.96973 -13.77048 -13.63805 -13.59546 -13.39702 -13.29938 -13.20250 -12.67246 -12.40621 -12.27870 -12.06021 -11.94044 -11.62851 -11.47006 -11.10876 -11.00366 -10.54880 -10.49743 -9.92914 -9.80196 -9.15605 -4.92744 0.29397 0.50710 1.29222 1.54659 1.63686 1.68711 1.99253 2.62180 2.71943 2.92926 3.03173 3.36942 3.37134 3.48726 3.57153 3.73070 3.82966 3.88836 3.99993 4.04653 4.08050 4.12891 4.29011 4.31583 4.34300 4.41208 4.50631 4.59594 4.60571 4.68083 4.70498 4.75832 4.94560 5.03525 5.06448 5.32797 5.44317 5.54777 5.57805 5.73825 6.38061 6.47985 6.55284 6.56388 6.62801 7.28702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.034 4.034 5 C -0.152 4.152 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.130 3.870 9 O -0.288 6.288 10 C 0.043 3.957 11 C 0.526 3.474 12 O -0.517 6.517 13 N -0.686 5.686 14 C 0.166 3.834 15 C 0.073 3.927 16 O -0.568 6.568 17 C -0.166 4.166 18 C 0.079 3.921 19 H 0.075 0.925 20 O -0.547 6.547 21 C -0.133 4.133 22 C -0.120 4.120 23 H 0.380 0.620 24 H 0.079 0.921 25 H -0.255 1.255 26 H -0.261 1.261 27 H 0.129 0.871 28 H 0.132 0.868 29 H 0.130 0.870 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.404 0.596 33 H 0.056 0.944 34 H 0.060 0.940 35 H 0.380 0.620 36 H 0.105 0.895 37 H 0.082 0.918 38 H 0.381 0.619 39 H 0.091 0.909 40 H 0.106 0.894 41 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.463 -1.775 -3.740 6.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.034 4.034 5 C -0.170 4.170 6 C -0.090 4.090 7 C -0.225 4.225 8 C 0.085 3.915 9 O -0.200 6.200 10 C -0.036 4.036 11 C 0.310 3.690 12 O -0.391 6.391 13 N -0.339 5.339 14 C 0.079 3.921 15 C -0.006 4.006 16 O -0.373 6.373 17 C -0.204 4.204 18 C 0.020 3.980 19 H 0.093 0.907 20 O -0.352 6.352 21 C -0.171 4.171 22 C -0.139 4.139 23 H 0.228 0.772 24 H 0.097 0.903 25 H -0.179 1.179 26 H -0.187 1.187 27 H 0.147 0.853 28 H 0.150 0.850 29 H 0.148 0.852 30 H 0.111 0.889 31 H 0.112 0.888 32 H 0.239 0.761 33 H 0.074 0.926 34 H 0.078 0.922 35 H 0.227 0.773 36 H 0.123 0.877 37 H 0.101 0.899 38 H 0.229 0.771 39 H 0.110 0.890 40 H 0.124 0.876 41 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.941 -1.333 -3.080 5.176 hybrid contribution -0.980 -0.374 -0.513 1.168 sum 2.961 -1.707 -3.593 4.959 Atomic orbital electron populations 1.86603 1.17604 1.80219 1.49730 1.24863 0.84659 1.11133 0.98163 0.94998 0.91677 0.74264 0.80230 1.19026 0.96536 0.92929 0.94925 1.20859 1.01112 0.99846 0.95190 1.20869 0.97988 0.93591 0.96573 1.21296 1.03567 0.96597 1.01058 1.19021 0.94711 0.83093 0.94702 1.86160 1.70367 1.22436 1.41074 1.22433 1.00153 0.92350 0.88686 1.19864 0.80571 0.86670 0.81848 1.90739 1.36849 1.74075 1.37433 1.45061 1.48274 1.13450 1.27081 1.21157 0.91361 0.82278 0.97290 1.22502 0.94426 0.91319 0.92322 1.86440 1.29881 1.59156 1.61826 1.24015 0.99103 0.99807 0.97432 1.22702 0.86524 0.93362 0.95417 0.90713 1.86508 1.25109 1.57951 1.65617 1.23408 0.95566 0.99292 0.98857 1.20226 1.02524 0.94011 0.97110 0.77175 0.90302 1.17919 1.18681 0.85322 0.85007 0.85206 0.88880 0.88843 0.76102 0.92552 0.92165 0.77259 0.87672 0.89929 0.77107 0.89038 0.87621 0.84802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.31 12.74 -35.23 -0.45 -1.76 16 2 C -0.08 -0.09 2.81 36.01 0.10 0.01 16 3 Si 0.69 -0.20 29.79 -169.99 -5.06 -5.26 16 4 C -0.03 -0.09 5.42 -104.64 -0.57 -0.66 16 5 C -0.15 -0.20 8.67 -39.56 -0.34 -0.54 16 6 C -0.07 -0.04 10.04 -39.60 -0.40 -0.44 16 7 C -0.21 -0.27 9.04 -39.43 -0.36 -0.63 16 8 C 0.13 0.49 6.69 -39.22 -0.26 0.22 16 9 O -0.29 -1.40 9.67 -39.35 -0.38 -1.78 16 10 C 0.04 0.06 5.22 36.00 0.19 0.24 16 11 C 0.53 1.82 7.46 -10.99 -0.08 1.73 16 12 O -0.52 -3.87 14.59 -14.36 -0.21 -4.08 16 13 N -0.69 -0.54 4.33 -46.85 -0.20 -0.74 16 14 C 0.17 0.07 0.83 -131.01 -0.11 -0.04 16 15 C 0.07 0.05 6.26 37.16 0.23 0.28 16 16 O -0.57 -0.60 13.33 -35.23 -0.47 -1.07 16 17 C -0.17 0.34 7.19 -25.91 -0.19 0.15 16 18 C 0.08 -0.11 5.28 -25.91 -0.14 -0.25 16 19 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 20 O -0.55 0.46 13.09 -35.23 -0.46 0.00 16 21 C -0.13 -0.08 6.80 -25.91 -0.18 -0.25 16 22 C -0.12 -0.50 9.55 -39.43 -0.38 -0.87 16 23 H 0.38 -0.67 8.74 45.56 0.40 -0.27 16 24 H 0.08 -0.04 7.96 -51.93 -0.41 -0.45 16 25 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 26 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 27 H 0.13 -0.10 4.87 -52.49 -0.26 -0.35 16 28 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 29 H 0.13 -0.16 6.30 -52.48 -0.33 -0.50 16 30 H 0.09 -0.11 7.65 -51.93 -0.40 -0.51 16 31 H 0.09 -0.07 7.67 -51.93 -0.40 -0.47 16 32 H 0.40 -0.59 8.66 -40.82 -0.35 -0.95 16 33 H 0.06 -0.08 7.85 -51.93 -0.41 -0.49 16 34 H 0.06 0.16 7.42 -51.93 -0.39 -0.23 16 35 H 0.38 -0.94 9.12 45.56 0.42 -0.53 16 36 H 0.10 -0.34 7.90 -51.93 -0.41 -0.75 16 37 H 0.08 -0.20 8.09 -51.93 -0.42 -0.62 16 38 H 0.38 -1.89 9.12 45.56 0.42 -1.48 16 39 H 0.09 0.34 7.28 -51.93 -0.38 -0.04 16 40 H 0.11 -0.12 8.10 -51.93 -0.42 -0.54 16 41 H 0.13 0.60 8.06 -52.49 -0.42 0.18 16 LS Contribution 344.02 15.07 5.18 5.18 Total: 0.00 -11.83 344.02 -8.33 -20.16 By element: Atomic # 1 Polarization: -5.83 SS G_CDS: -3.81 Total: -9.63 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -2.47 Total: -1.03 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.20 Total: -0.74 kcal Atomic # 8 Polarization: -6.72 SS G_CDS: -1.97 Total: -8.68 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.06 Total: -5.26 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -11.83 -8.33 -20.16 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_4860298.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.691 kcal (2) G-P(sol) polarization free energy of solvation -11.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds