Wall clock time and date at job start Sun Mar 7 2021 09:02:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86294 * 109.47264 * 2 1 4 4 C 1.50701 * 109.47398 * 120.00314 * 2 1 3 5 5 C 1.38235 * 119.94080 * 245.02165 * 4 2 1 6 6 C 1.38192 * 120.07844 * 179.76690 * 5 4 2 7 7 C 1.38668 * 119.95490 * 0.45902 * 6 5 4 8 8 O 1.35924 * 120.05878 * 179.79375 * 7 6 5 9 9 C 1.42903 * 116.99976 * 359.72232 * 8 7 6 10 10 C 1.53000 * 109.46868 * 180.02562 * 9 8 7 11 11 N 1.46496 * 109.46962 * 180.02562 * 10 9 8 12 12 C 1.34813 * 126.59695 * 124.99803 * 11 10 9 13 13 C 1.36604 * 106.83892 * 179.73556 * 12 11 10 14 14 C 1.47521 * 125.76649 * 180.21686 * 13 12 11 15 15 O 1.21597 * 120.00621 * 0.02562 * 14 13 12 16 16 N 1.34782 * 119.99404 * 179.97438 * 14 13 12 17 17 C 1.46507 * 119.99665 * 175.01558 * 16 14 13 18 18 C 1.52992 * 112.85069 * 293.65011 * 17 16 14 19 19 O 1.42899 * 109.47042 * 305.09001 * 18 17 16 20 20 C 1.53783 * 113.61073 * 64.84437 * 17 16 14 21 21 C 1.53777 * 87.08161 * 139.97885 * 20 17 16 22 22 H 1.09006 * 113.61604 * 89.11306 * 21 20 17 23 23 O 1.42896 * 113.61880 * 220.01756 * 21 20 17 24 24 C 1.53776 * 113.61229 * 162.33782 * 17 16 14 25 25 N 1.34399 * 108.45767 * 0.24337 * 13 12 11 26 26 N 1.28757 * 109.52629 * 359.97438 * 25 13 12 27 27 C 1.38855 * 119.88034 * 359.51851 * 7 6 5 28 28 Cl 1.73595 * 120.03806 * 180.27505 * 27 7 6 29 29 C 1.38215 * 119.92582 * 0.24990 * 27 7 6 30 30 H 0.96702 * 113.99112 * 299.99963 * 1 2 3 31 31 H 1.08996 * 109.46615 * 240.00048 * 2 1 3 32 32 H 1.48503 * 110.00179 * 178.68317 * 3 2 1 33 33 H 1.48504 * 110.00264 * 300.00251 * 3 2 1 34 34 H 1.08005 * 119.95759 * 359.97438 * 5 4 2 35 35 H 1.08002 * 120.02263 * 180.25697 * 6 5 4 36 36 H 1.09005 * 109.47023 * 60.00232 * 9 8 7 37 37 H 1.08999 * 109.47414 * 300.00415 * 9 8 7 38 38 H 1.08992 * 109.47399 * 60.00479 * 10 9 8 39 39 H 1.08999 * 109.46919 * 299.99990 * 10 9 8 40 40 H 1.07996 * 126.58276 * 0.02562 * 12 11 10 41 41 H 0.96992 * 120.00338 * 355.02439 * 16 14 13 42 42 H 1.09000 * 109.47487 * 65.09245 * 18 17 16 43 43 H 1.09009 * 109.47197 * 185.09790 * 18 17 16 44 44 H 0.96707 * 114.00008 * 180.02562 * 19 18 17 45 45 H 1.09005 * 113.61710 * 254.52663 * 20 17 16 46 46 H 1.09006 * 113.61663 * 25.34734 * 20 17 16 47 47 H 0.96702 * 114.00257 * 179.97438 * 23 21 20 48 48 H 1.08998 * 113.62040 * 334.57254 * 24 17 16 49 49 H 1.09002 * 113.61416 * 105.47440 * 24 17 16 50 50 H 1.07992 * 119.98104 * 179.97438 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6383 -0.0111 2.1906 6 6 3.0962 -0.6587 3.3223 7 6 2.8544 -2.0138 3.4902 8 8 3.3074 -2.6537 4.6005 9 6 4.0310 -1.8699 5.5513 10 6 4.4572 -2.7557 6.7237 11 7 5.1985 -1.9520 7.6987 12 6 4.9198 -1.8224 9.0114 13 6 5.8663 -0.9890 9.5365 14 6 5.9568 -0.5674 10.9472 15 8 5.1417 -0.9688 11.7554 16 7 6.9436 0.2622 11.3405 17 6 6.9709 0.7679 12.7152 18 6 5.7990 1.7002 13.0287 19 8 5.7679 2.7635 12.0746 20 6 7.1846 -0.3295 13.7712 21 6 8.1035 0.6631 14.5028 22 1 7.5791 1.2997 15.2156 23 8 9.2754 0.0591 15.0538 24 6 8.3383 1.3307 13.1374 25 7 6.7006 -0.6178 8.5504 26 7 6.3331 -1.1680 7.4458 27 6 2.1437 -2.7145 2.5248 28 17 1.8325 -4.4094 2.7342 29 6 1.6839 -2.0608 1.3971 30 1 -0.3932 0.4417 0.7651 31 1 1.7923 -0.5138 -0.8900 32 1 3.5347 1.7702 0.0321 33 1 1.5615 2.4679 -1.2085 34 1 2.8301 1.0435 2.0578 35 1 3.6448 -0.1105 4.0739 36 1 3.3949 -1.0638 5.9170 37 1 4.9158 -1.4470 5.0755 38 1 5.0935 -3.5615 6.3578 39 1 3.5726 -3.1789 7.1996 40 1 4.1073 -2.2915 9.5462 41 1 7.6356 0.5244 10.7135 42 1 4.8655 1.1398 12.9788 43 1 5.9215 2.1139 14.0298 44 1 5.0486 3.3950 12.2128 45 1 6.2821 -0.5811 14.3283 46 1 7.7048 -1.2078 13.3890 47 1 9.8575 0.6785 15.5149 48 1 9.1752 0.9069 12.5824 49 1 8.3673 2.4194 13.1829 50 1 1.1315 -2.6050 0.6455 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_7143556.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:22 Heat of formation + Delta-G solvation = -47.103865 kcal Electronic energy + Delta-G solvation = -37325.402283 eV Core-core repulsion = 31963.289514 eV Total energy + Delta-G solvation = -5362.112768 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.128 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -43.37060 -41.63328 -41.51299 -39.57405 -39.42494 -37.76032 -37.50637 -37.11099 -36.21198 -36.09074 -34.03666 -32.54868 -32.04486 -31.90262 -30.63649 -28.20359 -26.98016 -26.75419 -25.78361 -25.37763 -24.01505 -23.40142 -22.84790 -22.45030 -21.39964 -20.04593 -19.83394 -19.03186 -18.90735 -18.45075 -18.11395 -17.71742 -17.40916 -17.30755 -17.02755 -16.95962 -16.72572 -16.35895 -16.09090 -15.96634 -15.85675 -15.63184 -15.57347 -15.11753 -15.01363 -14.84369 -14.76939 -14.67023 -14.52984 -13.86454 -13.73615 -13.70718 -13.53868 -13.52158 -13.22322 -13.18645 -12.90795 -12.59962 -12.56532 -12.33284 -12.19461 -12.17352 -11.99014 -11.86501 -11.77052 -11.75185 -11.49743 -11.34570 -10.94839 -10.76840 -10.49446 -10.48132 -10.10193 -10.05237 -9.36428 -5.02301 -0.04964 0.01171 0.05387 0.53214 0.71316 1.04542 1.32085 1.62436 1.94133 1.97357 2.00769 2.18235 2.36319 2.94014 3.07962 3.19341 3.28256 3.38216 3.45641 3.47338 3.61143 3.65288 3.68476 3.71429 3.74233 3.76543 3.86776 3.96841 4.03636 4.06315 4.07918 4.24748 4.28074 4.41098 4.42089 4.44701 4.50396 4.56842 4.61035 4.68477 4.69016 4.73129 4.81087 4.92863 4.96663 4.96693 5.10628 5.19533 5.24606 5.43709 5.44417 5.99449 6.35290 6.76250 6.78786 6.81954 6.88624 7.07949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.070 4.070 3 Si 0.776 3.224 4 C -0.144 4.144 5 C -0.067 4.067 6 C -0.189 4.189 7 C 0.137 3.863 8 O -0.306 6.306 9 C 0.046 3.954 10 C 0.123 3.877 11 N -0.350 5.350 12 C 0.119 3.881 13 C -0.123 4.123 14 C 0.608 3.392 15 O -0.558 6.558 16 N -0.690 5.690 17 C 0.149 3.851 18 C 0.086 3.914 19 O -0.582 6.582 20 C -0.125 4.125 21 C 0.085 3.915 22 H 0.111 0.889 23 O -0.577 6.577 24 C -0.155 4.155 25 N -0.218 5.218 26 N -0.083 5.083 27 C -0.082 4.082 28 Cl -0.062 7.062 29 C -0.054 4.054 30 H 0.396 0.604 31 H 0.108 0.892 32 H -0.283 1.283 33 H -0.300 1.300 34 H 0.159 0.841 35 H 0.160 0.840 36 H 0.086 0.914 37 H 0.081 0.919 38 H 0.121 0.879 39 H 0.150 0.850 40 H 0.239 0.761 41 H 0.412 0.588 42 H 0.049 0.951 43 H 0.082 0.918 44 H 0.398 0.602 45 H 0.082 0.918 46 H 0.079 0.921 47 H 0.398 0.602 48 H 0.093 0.907 49 H 0.094 0.906 50 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.200 4.923 3.836 6.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.179 4.179 3 Si 0.682 3.318 4 C -0.145 4.145 5 C -0.084 4.084 6 C -0.207 4.207 7 C 0.090 3.910 8 O -0.218 6.218 9 C -0.030 4.030 10 C 0.003 3.997 11 N -0.135 5.135 12 C -0.038 4.038 13 C -0.263 4.263 14 C 0.393 3.607 15 O -0.436 6.436 16 N -0.340 5.340 17 C 0.063 3.937 18 C 0.008 3.992 19 O -0.390 6.390 20 C -0.163 4.163 21 C 0.025 3.975 22 H 0.129 0.871 23 O -0.385 6.385 24 C -0.193 4.193 25 N -0.092 5.092 26 N -0.064 5.064 27 C -0.109 4.109 28 Cl -0.034 7.034 29 C -0.072 4.072 30 H 0.246 0.754 31 H 0.126 0.874 32 H -0.210 1.210 33 H -0.228 1.228 34 H 0.176 0.824 35 H 0.178 0.822 36 H 0.105 0.895 37 H 0.099 0.901 38 H 0.139 0.861 39 H 0.168 0.832 40 H 0.255 0.745 41 H 0.248 0.752 42 H 0.068 0.932 43 H 0.100 0.900 44 H 0.248 0.752 45 H 0.101 0.899 46 H 0.098 0.902 47 H 0.249 0.751 48 H 0.112 0.888 49 H 0.113 0.887 50 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.032 4.172 1.939 4.715 hybrid contribution -0.461 -0.387 0.271 0.660 sum -1.493 3.785 2.211 4.631 Atomic orbital electron populations 1.86493 1.17121 1.82155 1.50543 1.25148 0.85373 1.10717 0.96694 0.93839 0.77868 0.74890 0.85176 1.20297 1.02026 0.93830 0.98354 1.21162 0.94696 1.00549 0.92021 1.21427 1.05664 0.92296 1.01339 1.18691 0.94423 0.91265 0.86574 1.86002 1.68879 1.37983 1.28949 1.22983 0.97086 0.94141 0.88765 1.21920 0.98423 0.91691 0.87707 1.50350 1.21394 1.33834 1.07964 1.23897 0.99874 0.95902 0.84134 1.21524 1.00130 1.09004 0.95622 1.16867 0.80955 0.78085 0.84763 1.90787 1.42313 1.57275 1.53259 1.45577 1.28051 1.47184 1.13149 1.21592 0.96493 0.94534 0.81096 1.22215 0.96600 0.87846 0.92578 1.86421 1.57056 1.40223 1.55291 1.23339 0.99561 0.97333 0.96086 1.23274 0.86939 0.94501 0.92745 0.87142 1.86501 1.35561 1.40642 1.75844 1.23926 0.95217 1.02403 0.97761 1.74628 1.21447 1.16162 0.96940 1.81985 0.99586 1.08249 1.16544 1.20361 1.06542 0.86597 0.97424 1.98384 1.94630 1.13083 1.97270 1.20873 0.97023 0.94246 0.95101 0.75383 0.87416 1.21015 1.22838 0.82396 0.82215 0.89544 0.90123 0.86085 0.83171 0.74509 0.75156 0.93240 0.89995 0.75238 0.89933 0.90242 0.75105 0.88828 0.88715 0.84004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.84 12.83 -148.98 -1.91 -1.07 16 2 C -0.07 0.18 2.80 71.24 0.20 0.38 16 3 Si 0.78 -3.33 29.80 68.60 2.04 -1.29 16 4 C -0.14 0.30 5.35 -19.85 -0.11 0.19 16 5 C -0.07 0.31 8.66 22.26 0.19 0.50 16 6 C -0.19 0.73 9.04 22.36 0.20 0.94 16 7 C 0.14 -0.04 6.68 22.52 0.15 0.11 16 8 O -0.31 0.62 9.60 -92.70 -0.89 -0.27 16 9 C 0.05 -0.32 4.94 71.98 0.36 0.04 16 10 C 0.12 -1.10 6.91 86.38 0.60 -0.50 16 11 N -0.35 1.06 3.69 -347.11 -1.28 -0.22 16 12 C 0.12 -0.30 11.27 83.85 0.95 0.65 16 13 C -0.12 -0.48 6.99 40.82 0.29 -0.19 16 14 C 0.61 3.73 7.47 86.69 0.65 4.38 16 15 O -0.56 -5.33 15.28 -4.02 -0.06 -5.39 16 16 N -0.69 -2.61 5.12 -423.66 -2.17 -4.78 16 17 C 0.15 0.20 0.85 4.12 0.00 0.20 16 18 C 0.09 -0.05 6.20 71.98 0.45 0.40 16 19 O -0.58 -0.06 13.53 -148.98 -2.02 -2.08 16 20 C -0.12 -0.31 6.40 31.12 0.20 -0.11 16 21 C 0.08 -0.16 4.86 31.12 0.15 -0.01 16 22 H 0.11 -0.73 7.61 -2.38 -0.02 -0.75 16 23 O -0.58 -0.29 13.67 -148.98 -2.04 -2.33 16 24 C -0.16 0.27 7.22 31.12 0.22 0.49 16 25 N -0.22 -1.34 12.04 -49.99 -0.60 -1.95 16 26 N -0.08 -0.34 13.64 37.02 0.51 0.17 16 27 C -0.08 -0.17 6.33 22.41 0.14 -0.03 16 28 Cl -0.06 -0.23 28.51 -2.72 -0.08 -0.31 16 29 C -0.05 -0.04 9.46 22.28 0.21 0.17 16 30 H 0.40 -3.86 8.70 -74.06 -0.64 -4.50 16 31 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 32 H -0.28 -0.09 7.11 99.48 0.71 0.61 16 33 H -0.30 -1.17 7.11 99.48 0.71 -0.46 16 34 H 0.16 -1.51 4.90 -2.91 -0.01 -1.53 16 35 H 0.16 -1.28 6.30 -2.91 -0.02 -1.30 16 36 H 0.09 -0.75 7.65 -2.38 -0.02 -0.77 16 37 H 0.08 -0.45 7.67 -2.39 -0.02 -0.47 16 38 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 39 H 0.15 -2.17 8.08 -2.39 -0.02 -2.19 16 40 H 0.24 -2.26 8.06 -2.91 -0.02 -2.28 16 41 H 0.41 1.23 8.40 -92.71 -0.78 0.45 16 42 H 0.05 0.12 7.21 -2.39 -0.02 0.11 16 43 H 0.08 -0.46 7.32 -2.38 -0.02 -0.48 16 44 H 0.40 -3.16 9.12 -74.05 -0.68 -3.83 16 45 H 0.08 0.23 8.10 -2.38 -0.02 0.21 16 46 H 0.08 0.51 8.14 -2.38 -0.02 0.49 16 47 H 0.40 -3.32 9.12 -74.06 -0.68 -3.99 16 48 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 49 H 0.09 -0.34 8.10 -2.39 -0.02 -0.36 16 50 H 0.14 0.08 8.06 -2.91 -0.02 0.06 16 Total: 0.00 -28.94 440.15 -5.31 -34.26 By element: Atomic # 1 Polarization: -20.69 SS G_CDS: -1.66 Total: -22.35 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: 4.85 Total: 7.60 kcal Atomic # 7 Polarization: -3.24 SS G_CDS: -3.55 Total: -6.78 kcal Atomic # 8 Polarization: -4.21 SS G_CDS: -6.92 Total: -11.13 kcal Atomic # 14 Polarization: -3.33 SS G_CDS: 2.04 Total: -1.29 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.08 Total: -0.31 kcal Total: -28.94 -5.31 -34.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_7143556.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.846 kcal (2) G-P(sol) polarization free energy of solvation -28.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.313 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.258 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds