Wall clock time and date at job start Sun Mar 7 2021 09:02:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37935 * 120.07247 * 2 1 4 4 C 1.38379 * 120.14473 * 180.27630 * 3 2 1 5 5 C 1.50696 * 119.85720 * 179.72192 * 4 3 2 6 6 C 1.38340 * 120.29074 * 359.74590 * 4 3 2 7 7 C 1.50704 * 119.92672 * 180.02562 * 6 4 3 8 8 O 1.42895 * 109.47291 * 75.01842 * 7 6 4 9 9 Si 1.86302 * 109.46683 * 195.02016 * 7 6 4 10 10 C 1.37982 * 120.14674 * 0.02562 * 6 4 3 11 11 C 1.39556 * 119.85032 * 359.97438 * 10 6 4 12 12 C 1.47847 * 120.14648 * 179.97438 * 11 10 6 13 13 O 1.21549 * 120.00253 * 174.84558 * 12 11 10 14 14 N 1.34776 * 119.99548 * 354.84013 * 12 11 10 15 15 C 1.46499 * 119.99812 * 185.08180 * 14 12 11 16 16 C 1.53009 * 112.84971 * 66.46722 * 15 14 12 17 17 O 1.42900 * 109.46828 * 46.21352 * 16 15 14 18 18 C 1.53778 * 113.61727 * 197.76984 * 15 14 12 19 19 C 1.53781 * 87.08291 * 139.98343 * 18 15 14 20 20 H 1.08993 * 113.69072 * 89.12831 * 19 18 15 21 21 O 1.42903 * 113.61639 * 220.02576 * 19 18 15 22 22 C 1.53780 * 113.61729 * 295.27350 * 15 14 12 23 23 H 1.09002 * 109.47156 * 263.22124 * 1 2 3 24 24 H 1.09003 * 109.47281 * 23.21855 * 1 2 3 25 25 H 1.08998 * 109.47221 * 143.21794 * 1 2 3 26 26 H 1.08004 * 119.93380 * 0.02562 * 3 2 1 27 27 H 1.09003 * 109.47025 * 270.01916 * 5 4 3 28 28 H 1.09000 * 109.47294 * 30.01994 * 5 4 3 29 29 H 1.09007 * 109.47281 * 150.02541 * 5 4 3 30 30 H 1.09000 * 109.46995 * 315.01293 * 7 6 4 31 31 H 0.96696 * 113.99965 * 299.99462 * 8 7 6 32 32 H 1.48500 * 110.00117 * 298.67354 * 9 7 6 33 33 H 1.48502 * 110.00402 * 59.99668 * 9 7 6 34 34 H 1.07998 * 120.07493 * 180.02562 * 10 6 4 35 35 H 0.97001 * 120.00306 * 5.08533 * 14 12 11 36 36 H 1.09002 * 109.47045 * 166.21379 * 16 15 14 37 37 H 1.08995 * 109.46977 * 286.21626 * 16 15 14 38 38 H 0.96699 * 114.00063 * 179.97438 * 17 16 15 39 39 H 1.09007 * 113.60979 * 25.43414 * 18 15 14 40 40 H 1.08989 * 113.62041 * 254.53605 * 18 15 14 41 41 H 0.96696 * 113.99721 * 277.49222 * 21 19 18 42 42 H 1.09001 * 113.61852 * 105.46723 * 22 15 14 43 43 H 1.09003 * 113.68752 * 334.57415 * 22 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1954 -0.0058 5 6 4.3305 2.5033 -0.0121 6 6 4.2813 0.0018 -0.0063 7 6 5.7883 0.0133 -0.0120 8 8 6.2669 0.3675 1.2870 9 14 6.4203 -1.6793 -0.4666 10 6 3.6020 -1.1993 -0.0016 11 6 2.2065 -1.2080 0.0043 12 6 1.4721 -2.4912 0.0088 13 8 0.2607 -2.4978 0.1084 14 7 2.1459 -3.6536 -0.0977 15 6 1.4132 -4.9176 -0.2054 16 6 0.6215 -5.0363 -1.5093 17 8 1.4477 -4.6404 -2.6059 18 6 2.2694 -6.1549 0.1122 19 6 1.0417 -6.7186 0.8469 20 1 0.3758 -7.2972 0.2069 21 8 1.3631 -7.3916 2.0659 22 6 0.5912 -5.2620 1.0479 23 1 -0.3633 -0.1213 1.0205 24 1 -0.3634 0.9444 -0.4052 25 1 -0.3633 -0.8231 -0.6153 26 1 1.6583 2.1291 0.0004 27 1 4.5064 2.8163 -1.0413 28 1 3.7409 3.2619 0.5027 29 1 5.2858 2.3777 0.4977 30 1 6.1433 0.7415 -0.7412 31 1 5.9761 1.2388 1.5892 32 1 5.9697 -2.6763 0.5375 33 1 5.9295 -2.0594 -1.8156 34 1 4.1491 -2.1304 -0.0015 35 1 3.1159 -3.6532 -0.1030 36 1 0.3033 -6.0695 -1.6485 37 1 -0.2546 -4.3895 -1.4624 38 1 1.0098 -4.6909 -3.4666 39 1 3.1133 -5.9449 0.7695 40 1 2.5517 -6.7288 -0.7703 41 1 1.6471 -8.3082 1.9460 42 1 -0.4813 -5.1151 0.9206 43 1 0.9751 -4.8084 1.9616 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_9599494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:26 Heat of formation + Delta-G solvation = -111.835692 kcal Electronic energy + Delta-G solvation = -26662.590443 eV Core-core repulsion = 22868.184068 eV Total energy + Delta-G solvation = -3794.406374 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.14685 -41.11103 -39.60748 -37.75515 -37.56067 -36.31652 -34.73937 -34.36359 -33.10621 -29.52847 -28.75169 -28.07833 -27.11964 -25.70757 -24.45203 -23.76653 -22.38720 -21.11071 -20.17494 -19.06657 -19.05130 -18.32099 -18.21280 -17.31165 -16.73155 -16.58233 -16.54035 -16.41379 -16.14169 -15.50630 -15.46832 -14.99637 -14.93887 -14.73881 -14.53777 -14.11569 -13.93861 -13.78717 -13.67884 -13.41878 -13.34274 -13.09458 -12.96292 -12.85948 -12.73615 -12.69163 -12.29472 -12.02229 -11.78715 -11.35779 -11.23758 -11.11676 -11.04288 -10.62832 -10.33401 -10.04178 -9.74045 -4.89881 -0.40407 0.01886 1.28675 1.54831 1.63474 1.86031 1.87437 2.50428 2.83657 3.09329 3.24216 3.33837 3.43451 3.45376 3.54871 3.59976 3.67093 3.77886 3.92176 4.01053 4.05942 4.17196 4.29591 4.33825 4.39032 4.43866 4.45531 4.54300 4.57153 4.58828 4.66951 4.70772 4.75614 4.79909 4.82018 4.94566 4.96932 5.02404 5.13819 5.30379 5.33518 5.39236 5.68689 6.24472 6.59451 6.68359 6.80077 6.97586 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.028 4.028 3 C -0.130 4.130 4 C -0.039 4.039 5 C -0.125 4.125 6 C -0.139 4.139 7 C -0.085 4.085 8 O -0.545 6.545 9 Si 0.796 3.204 10 C -0.090 4.090 11 C -0.162 4.162 12 C 0.559 3.441 13 O -0.549 6.549 14 N -0.703 5.703 15 C 0.146 3.854 16 C 0.088 3.912 17 O -0.583 6.583 18 C -0.157 4.157 19 C 0.089 3.911 20 H 0.114 0.886 21 O -0.576 6.576 22 C -0.126 4.126 23 H 0.069 0.931 24 H 0.079 0.921 25 H 0.077 0.923 26 H 0.157 0.843 27 H 0.092 0.908 28 H 0.088 0.912 29 H 0.082 0.918 30 H 0.102 0.898 31 H 0.374 0.626 32 H -0.288 1.288 33 H -0.269 1.269 34 H 0.120 0.880 35 H 0.401 0.599 36 H 0.086 0.914 37 H 0.046 0.954 38 H 0.398 0.602 39 H 0.091 0.909 40 H 0.099 0.901 41 H 0.400 0.600 42 H 0.080 0.920 43 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.495 0.643 -3.573 5.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.029 4.029 3 C -0.148 4.148 4 C -0.039 4.039 5 C -0.181 4.181 6 C -0.139 4.139 7 C -0.193 4.193 8 O -0.353 6.353 9 Si 0.698 3.302 10 C -0.109 4.109 11 C -0.165 4.165 12 C 0.348 3.652 13 O -0.429 6.429 14 N -0.353 5.353 15 C 0.060 3.940 16 C 0.009 3.991 17 O -0.391 6.391 18 C -0.195 4.195 19 C 0.030 3.970 20 H 0.132 0.868 21 O -0.385 6.385 22 C -0.164 4.164 23 H 0.088 0.912 24 H 0.098 0.902 25 H 0.095 0.905 26 H 0.174 0.826 27 H 0.110 0.890 28 H 0.107 0.893 29 H 0.101 0.899 30 H 0.120 0.880 31 H 0.225 0.775 32 H -0.215 1.215 33 H -0.195 1.195 34 H 0.138 0.862 35 H 0.236 0.764 36 H 0.104 0.896 37 H 0.065 0.935 38 H 0.248 0.752 39 H 0.110 0.890 40 H 0.117 0.883 41 H 0.250 0.750 42 H 0.098 0.902 43 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 2.968 -0.107 -3.046 4.254 hybrid contribution -1.300 0.336 -0.324 1.382 sum 1.667 0.229 -3.370 3.767 Atomic orbital electron populations 1.21010 0.89569 1.03456 1.03087 1.20289 0.97349 0.91717 0.93569 1.21306 0.93773 0.98024 1.01664 1.20355 0.93753 0.95831 0.93985 1.21074 1.00420 0.92226 1.04343 1.20329 0.97235 0.92745 1.03640 1.25346 0.89927 1.14978 0.89086 1.86772 1.75166 1.41029 1.32364 0.92551 0.90336 0.70952 0.76341 1.21187 0.93205 0.98080 0.98389 1.19791 0.93486 0.93592 1.09647 1.18392 0.87038 0.84080 0.75643 1.90686 1.14239 1.87422 1.50536 1.45725 1.10021 1.05434 1.74153 1.21648 0.94639 0.83322 0.94366 1.22235 0.91919 1.00225 0.84711 1.86410 1.43287 1.90813 1.18573 1.23978 0.98582 0.94985 1.01995 1.23235 0.95478 0.92105 0.86220 0.86835 1.86508 1.89187 1.31699 1.31074 1.23342 1.00960 0.95290 0.96845 0.91203 0.90207 0.90462 0.82577 0.88981 0.89287 0.89925 0.88024 0.77468 1.21508 1.19476 0.86249 0.76354 0.89608 0.93545 0.75232 0.89026 0.88272 0.74961 0.90160 0.90667 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.78 8.73 71.24 0.62 -0.16 16 2 C -0.03 -0.21 5.91 -19.61 -0.12 -0.33 16 3 C -0.13 -0.35 9.31 22.23 0.21 -0.14 16 4 C -0.04 -0.04 5.87 -19.81 -0.12 -0.16 16 5 C -0.12 0.76 9.27 71.23 0.66 1.42 16 6 C -0.14 -0.53 5.26 -19.90 -0.10 -0.64 16 7 C -0.08 0.01 1.96 71.24 0.14 0.15 16 8 O -0.54 -0.37 12.64 -148.98 -1.88 -2.25 16 9 Si 0.80 0.18 30.40 68.60 2.09 2.27 16 10 C -0.09 -0.68 8.14 22.53 0.18 -0.50 16 11 C -0.16 -1.60 5.87 -20.09 -0.12 -1.72 16 12 C 0.56 6.46 7.37 86.79 0.64 7.10 16 13 O -0.55 -8.20 11.89 -3.87 -0.05 -8.25 16 14 N -0.70 -5.43 4.91 -423.37 -2.08 -7.51 16 15 C 0.15 0.64 0.92 4.13 0.00 0.64 16 16 C 0.09 0.20 6.16 71.99 0.44 0.64 16 17 O -0.58 -1.81 13.37 -148.98 -1.99 -3.81 16 18 C -0.16 -0.02 7.18 31.12 0.22 0.20 16 19 C 0.09 0.00 4.86 31.12 0.15 0.15 16 20 H 0.11 -0.59 7.69 -2.39 -0.02 -0.61 16 21 O -0.58 -1.16 13.67 -148.98 -2.04 -3.20 16 22 C -0.13 -0.71 6.39 31.12 0.20 -0.51 16 23 H 0.07 0.55 8.14 -2.39 -0.02 0.53 16 24 H 0.08 0.16 8.04 -2.39 -0.02 0.14 16 25 H 0.08 0.84 5.86 -2.39 -0.01 0.83 16 26 H 0.16 -0.39 8.06 -2.91 -0.02 -0.41 16 27 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 28 H 0.09 -0.71 8.08 -2.39 -0.02 -0.73 16 29 H 0.08 -0.71 4.96 -2.38 -0.01 -0.72 16 30 H 0.10 -0.50 7.37 -2.39 -0.02 -0.52 16 31 H 0.37 -1.88 6.84 -74.06 -0.51 -2.39 16 32 H -0.29 -1.70 6.80 99.48 0.68 -1.02 16 33 H -0.27 -1.03 7.11 99.48 0.71 -0.32 16 34 H 0.12 0.79 3.29 -2.91 -0.01 0.78 16 35 H 0.40 2.40 6.76 -92.71 -0.63 1.77 16 36 H 0.09 -0.31 7.37 -2.39 -0.02 -0.33 16 37 H 0.05 0.27 7.45 -2.39 -0.02 0.25 16 38 H 0.40 -1.99 9.12 -74.06 -0.68 -2.67 16 39 H 0.09 0.15 8.14 -2.38 -0.02 0.13 16 40 H 0.10 -0.27 8.10 -2.39 -0.02 -0.29 16 41 H 0.40 -2.91 9.12 -74.06 -0.68 -3.58 16 42 H 0.08 0.51 8.10 -2.39 -0.02 0.49 16 43 H 0.07 0.77 8.14 -2.39 -0.02 0.75 16 Total: 0.00 -20.92 342.78 -4.32 -25.24 By element: Atomic # 1 Polarization: -7.26 SS G_CDS: -1.39 Total: -8.64 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: 3.02 Total: 6.15 kcal Atomic # 7 Polarization: -5.43 SS G_CDS: -2.08 Total: -7.51 kcal Atomic # 8 Polarization: -11.55 SS G_CDS: -5.96 Total: -17.51 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: 2.09 Total: 2.27 kcal Total: -20.92 -4.32 -25.24 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_9599494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.595 kcal (2) G-P(sol) polarization free energy of solvation -20.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.317 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.836 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds