Wall clock time and date at job start Sun Mar 7 2021 09:02:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36770 * 125.79974 * 2 1 4 4 C 1.47260 * 126.94401 * 359.97438 * 3 2 1 5 5 O 1.21632 * 119.99872 * 0.02562 * 4 3 2 6 6 N 1.34773 * 119.99982 * 179.97438 * 4 3 2 7 7 C 1.46506 * 120.00122 * 184.97202 * 6 4 3 8 8 C 1.53000 * 112.84973 * 294.52603 * 7 6 4 9 9 O 1.42904 * 109.47057 * 315.09930 * 8 7 6 10 10 C 1.53777 * 113.61343 * 65.71826 * 7 6 4 11 11 C 1.53780 * 87.08105 * 140.06625 * 10 7 6 12 12 H 1.08996 * 113.61536 * 89.11985 * 11 10 7 13 13 O 1.42902 * 113.61139 * 220.01909 * 11 10 7 14 14 C 1.53777 * 87.08174 * 334.56608 * 11 10 7 15 15 C 1.46689 * 106.11341 * 180.23933 * 3 2 1 16 16 C 1.34485 * 106.33181 * 359.57389 * 15 3 2 17 17 C 1.50697 * 125.57266 * 180.14403 * 16 15 3 18 18 O 1.42902 * 109.47359 * 65.30737 * 17 16 15 19 19 Si 1.86298 * 109.47421 * 185.30793 * 17 16 15 20 20 N 1.34657 * 125.80206 * 179.97438 * 2 1 3 21 21 H 1.08999 * 109.47337 * 89.99341 * 1 2 3 22 22 H 1.08992 * 109.47314 * 209.99808 * 1 2 3 23 23 H 1.09001 * 109.47151 * 330.00000 * 1 2 3 24 24 H 0.96998 * 120.00130 * 4.98115 * 6 4 3 25 25 H 1.09000 * 109.47098 * 195.10382 * 8 7 6 26 26 H 1.08997 * 109.47245 * 75.09942 * 8 7 6 27 27 H 0.96695 * 113.99915 * 179.97438 * 9 8 7 28 28 H 1.09000 * 113.61731 * 254.61500 * 10 7 6 29 29 H 1.09008 * 113.61523 * 25.51658 * 10 7 6 30 30 H 0.96699 * 113.99783 * 179.97438 * 13 11 10 31 31 H 1.08996 * 113.62045 * 270.88308 * 14 11 10 32 32 H 1.08997 * 113.61648 * 139.97690 * 14 11 10 33 33 H 1.07997 * 126.83313 * 179.73545 * 15 3 2 34 34 H 1.08998 * 109.47407 * 305.31071 * 17 16 15 35 35 H 0.96700 * 114.00493 * 179.97438 * 18 17 16 36 36 H 1.48500 * 110.00169 * 178.67749 * 19 17 16 37 37 H 1.48496 * 110.00065 * 300.00448 * 19 17 16 38 38 H 0.96997 * 124.84973 * 0.04312 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6838 2.7839 -0.0006 6 7 2.7849 3.5054 0.0001 7 6 2.3538 4.9013 0.1095 8 6 1.5402 5.3683 -1.0991 9 8 2.1781 4.9306 -2.3007 10 6 1.7007 5.2402 1.4598 11 6 2.4568 6.5779 1.4006 12 1 1.9054 7.3691 0.8926 13 8 2.9881 6.9914 2.6611 14 6 3.4834 5.8679 0.5025 15 6 3.6882 0.6152 -0.0059 16 6 3.6095 -0.7274 0.0007 17 6 4.7819 -1.6742 0.0012 18 8 5.5103 -1.5299 1.2221 19 14 4.1657 -3.4257 -0.1510 20 7 2.2947 -1.0921 0.0005 21 1 -0.3634 0.0001 -1.0276 22 1 -0.3633 -0.8899 0.5138 23 1 -0.3633 0.8900 0.5138 24 1 3.7287 3.2936 -0.0721 25 1 1.4778 6.4565 -1.0966 26 1 0.5364 4.9466 -1.0463 27 1 1.7158 5.1915 -3.1089 28 1 0.6174 5.3482 1.4061 29 1 2.0225 4.5924 2.2754 30 1 3.4651 7.8320 2.6302 31 1 4.2927 5.3918 1.0561 32 1 3.8393 6.4826 -0.3243 33 1 4.5889 1.2109 -0.0115 34 1 5.4349 -1.4444 -0.8407 35 1 6.2803 -2.1108 1.2918 36 1 5.3138 -4.3671 -0.1838 37 1 3.2741 -3.7515 0.9910 38 1 1.9734 -2.0073 0.0003 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341542_9865296.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:32 Heat of formation + Delta-G solvation = -94.566410 kcal Electronic energy + Delta-G solvation = -22988.355156 eV Core-core repulsion = 19413.035483 eV Total energy + Delta-G solvation = -3575.319674 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.130 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.49529 -41.45336 -39.29990 -37.88023 -37.47051 -36.10998 -34.07072 -32.89947 -31.95009 -29.03351 -28.14766 -26.98729 -25.76552 -24.30466 -22.79354 -21.47597 -20.58017 -19.93506 -18.92643 -18.69399 -18.16140 -18.06717 -17.34088 -16.72721 -16.41639 -16.16116 -15.87582 -15.59592 -15.31615 -14.87203 -14.71896 -14.57578 -14.50612 -14.07671 -13.81088 -13.61302 -13.47200 -13.42902 -13.21659 -12.94352 -12.82893 -12.54237 -12.14363 -11.86491 -11.67270 -11.17118 -10.94587 -10.66399 -10.46406 -10.10455 -9.81577 -9.15936 -5.07294 0.71146 1.09795 1.24541 1.45215 1.78786 1.99694 2.35379 2.55380 3.01544 3.25755 3.38193 3.40950 3.68415 3.69695 3.72301 3.88079 4.00680 4.13046 4.21066 4.33740 4.42527 4.43904 4.51777 4.60985 4.68632 4.71870 4.72975 4.76345 4.90550 4.97324 5.02447 5.11689 5.24374 5.61143 5.68633 5.85469 6.38633 6.56444 6.67784 6.83206 6.87811 7.38867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C 0.117 3.883 3 C -0.265 4.265 4 C 0.593 3.407 5 O -0.577 6.577 6 N -0.697 5.697 7 C 0.153 3.847 8 C 0.088 3.912 9 O -0.580 6.580 10 C -0.130 4.130 11 C 0.086 3.914 12 H 0.110 0.890 13 O -0.577 6.577 14 C -0.154 4.154 15 C -0.141 4.141 16 C 0.014 3.986 17 C -0.054 4.054 18 O -0.556 6.556 19 Si 0.754 3.246 20 N -0.537 5.537 21 H 0.089 0.911 22 H 0.087 0.913 23 H 0.082 0.918 24 H 0.407 0.593 25 H 0.078 0.922 26 H 0.046 0.954 27 H 0.395 0.605 28 H 0.075 0.925 29 H 0.076 0.924 30 H 0.398 0.602 31 H 0.095 0.905 32 H 0.095 0.905 33 H 0.154 0.846 34 H 0.111 0.889 35 H 0.399 0.601 36 H -0.273 1.273 37 H -0.291 1.291 38 H 0.425 0.575 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.242 -0.733 -4.517 5.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.002 4.002 3 C -0.275 4.275 4 C 0.383 3.617 5 O -0.459 6.459 6 N -0.347 5.347 7 C 0.066 3.934 8 C 0.009 3.991 9 O -0.387 6.387 10 C -0.169 4.169 11 C 0.027 3.973 12 H 0.127 0.873 13 O -0.386 6.386 14 C -0.192 4.192 15 C -0.165 4.165 16 C -0.094 4.094 17 C -0.163 4.163 18 O -0.366 6.366 19 Si 0.657 3.343 20 N -0.137 5.137 21 H 0.108 0.892 22 H 0.106 0.894 23 H 0.101 0.899 24 H 0.243 0.757 25 H 0.096 0.904 26 H 0.064 0.936 27 H 0.245 0.755 28 H 0.094 0.906 29 H 0.095 0.905 30 H 0.249 0.751 31 H 0.113 0.887 32 H 0.114 0.886 33 H 0.171 0.829 34 H 0.128 0.872 35 H 0.250 0.750 36 H -0.199 1.199 37 H -0.218 1.218 38 H 0.266 0.734 Dipole moment (debyes) X Y Z Total from point charges 1.103 -1.829 -3.415 4.028 hybrid contribution 1.223 0.255 0.292 1.283 sum 2.327 -1.575 -3.123 4.201 Atomic orbital electron populations 1.20606 0.85730 1.04453 1.04307 1.20584 0.94419 0.85381 0.99851 1.20250 0.94031 0.92053 1.21156 1.17490 0.85113 0.84609 0.74485 1.90677 1.17623 1.84815 1.52779 1.45438 1.10011 1.04640 1.74662 1.21479 0.96998 0.81450 0.93487 1.22229 0.94787 0.98377 0.83682 1.86408 1.54559 1.81379 1.16402 1.23387 1.00587 0.96715 0.96210 1.23238 0.94467 0.95142 0.84478 0.87250 1.86506 1.75337 1.45378 1.31331 1.23939 0.97132 0.97583 1.00525 1.21945 0.95572 0.93214 1.05763 1.19454 0.84006 0.94533 1.11440 1.24312 0.93364 1.08645 0.90005 1.86569 1.45657 1.65838 1.38530 0.94572 0.82064 0.71703 0.85989 1.41642 1.05153 1.08825 1.58075 0.89229 0.89436 0.89941 0.75715 0.90421 0.93589 0.75538 0.90595 0.90539 0.75093 0.88681 0.88601 0.82885 0.87176 0.74996 1.19862 1.21823 0.73408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.23 9.88 71.24 0.70 0.47 16 2 C 0.12 0.64 7.17 41.78 0.30 0.94 16 3 C -0.27 -2.31 6.29 -19.04 -0.12 -2.43 16 4 C 0.59 6.56 7.47 86.62 0.65 7.20 16 5 O -0.58 -8.90 13.25 -4.13 -0.05 -8.95 16 6 N -0.70 -4.47 4.93 -423.90 -2.09 -6.56 16 7 C 0.15 0.61 0.93 4.13 0.00 0.62 16 8 C 0.09 0.25 6.06 71.98 0.44 0.69 16 9 O -0.58 -2.01 13.34 -148.98 -1.99 -4.00 16 10 C -0.13 -0.74 6.69 31.12 0.21 -0.53 16 11 C 0.09 0.01 4.86 31.12 0.15 0.16 16 12 H 0.11 -0.50 7.70 -2.39 -0.02 -0.51 16 13 O -0.58 -1.22 13.67 -148.98 -2.04 -3.25 16 14 C -0.15 0.06 7.17 31.12 0.22 0.28 16 15 C -0.14 -0.77 10.45 23.62 0.25 -0.52 16 16 C 0.01 0.04 6.13 40.98 0.25 0.29 16 17 C -0.05 0.12 2.97 71.23 0.21 0.33 16 18 O -0.56 -0.47 12.86 -148.98 -1.92 -2.38 16 19 Si 0.75 -3.59 30.96 68.60 2.12 -1.47 16 20 N -0.54 -0.72 5.41 -171.08 -0.93 -1.64 16 21 H 0.09 0.06 8.14 -2.39 -0.02 0.04 16 22 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 23 H 0.08 0.61 6.47 -2.39 -0.02 0.60 16 24 H 0.41 1.37 7.84 -92.71 -0.73 0.65 16 25 H 0.08 -0.21 7.37 -2.39 -0.02 -0.23 16 26 H 0.05 0.32 7.16 -2.39 -0.02 0.30 16 27 H 0.40 -1.76 9.12 -74.06 -0.68 -2.43 16 28 H 0.08 0.51 8.10 -2.39 -0.02 0.49 16 29 H 0.08 0.75 8.14 -2.38 -0.02 0.73 16 30 H 0.40 -2.84 9.12 -74.06 -0.68 -3.51 16 31 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 32 H 0.10 -0.28 8.10 -2.39 -0.02 -0.30 16 33 H 0.15 0.37 7.70 -2.91 -0.02 0.35 16 34 H 0.11 -0.72 7.96 -2.39 -0.02 -0.74 16 35 H 0.40 -3.07 8.74 -74.06 -0.65 -3.71 16 36 H -0.27 0.21 7.11 99.48 0.71 0.92 16 37 H -0.29 -0.56 7.11 99.48 0.71 0.15 16 38 H 0.42 -1.78 6.72 -92.71 -0.62 -2.41 16 Total: 0.00 -24.80 319.36 -5.78 -30.59 By element: Atomic # 1 Polarization: -7.68 SS G_CDS: -2.16 Total: -9.84 kcal Atomic # 6 Polarization: 4.25 SS G_CDS: 3.26 Total: 7.51 kcal Atomic # 7 Polarization: -5.19 SS G_CDS: -3.01 Total: -8.20 kcal Atomic # 8 Polarization: -12.59 SS G_CDS: -5.99 Total: -18.59 kcal Atomic # 14 Polarization: -3.59 SS G_CDS: 2.12 Total: -1.47 kcal Total: -24.80 -5.78 -30.59 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341542_9865296.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.981 kcal (2) G-P(sol) polarization free energy of solvation -24.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.785 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds