Wall clock time and date at job start Sun Mar 7 2021 09:02:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42899 * 113.99855 * 2 1 4 4 H 1.09003 * 112.90783 * 18.74357 * 3 2 1 5 5 C 1.53783 * 113.61549 * 150.00095 * 3 2 1 6 6 C 1.53774 * 87.08235 * 89.11172 * 5 3 2 7 7 C 1.53006 * 113.61475 * 140.06037 * 6 5 3 8 8 O 1.42895 * 109.47302 * 186.58907 * 7 6 5 9 9 N 1.46496 * 113.61921 * 270.88393 * 6 5 3 10 10 C 1.34777 * 119.99615 * 303.12190 * 9 6 5 11 11 O 1.21277 * 120.00342 * 355.28548 * 10 9 6 12 12 C 1.50704 * 119.99644 * 175.29429 * 10 9 6 13 13 C 1.53000 * 109.47490 * 64.99644 * 12 10 9 14 14 O 1.42905 * 109.46888 * 184.99946 * 12 10 9 15 15 C 1.35903 * 116.99949 * 157.31103 * 14 12 10 16 16 C 1.38730 * 120.05457 * 356.41108 * 15 14 12 17 17 C 1.38142 * 119.94151 * 179.74758 * 16 15 14 18 18 C 1.38275 * 120.05334 * 0.50417 * 17 16 15 19 19 C 1.50702 * 119.94216 * 179.74900 * 18 17 16 20 20 O 1.42896 * 109.46825 * 245.02171 * 19 18 17 21 21 Si 1.86300 * 109.47169 * 5.02136 * 19 18 17 22 22 C 1.38266 * 120.11088 * 359.77037 * 18 17 16 23 23 C 1.38136 * 120.05508 * 359.97438 * 22 18 17 24 24 C 1.53778 * 113.61197 * 247.49730 * 3 2 1 25 25 H 1.08993 * 109.47388 * 60.00469 * 1 2 3 26 26 H 1.09006 * 109.46864 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47478 * 299.99861 * 1 2 3 28 28 H 1.08995 * 113.60975 * 334.56199 * 5 3 2 29 29 H 1.09001 * 113.61283 * 203.66296 * 5 3 2 30 30 H 1.09000 * 109.47139 * 306.59478 * 7 6 5 31 31 H 1.09003 * 109.46671 * 66.59082 * 7 6 5 32 32 H 0.96703 * 113.99786 * 180.02562 * 8 7 6 33 33 H 0.97006 * 120.00357 * 123.38797 * 9 6 5 34 34 H 1.09004 * 109.47177 * 304.99268 * 12 10 9 35 35 H 1.08997 * 109.47070 * 179.97438 * 13 12 10 36 36 H 1.08999 * 109.46750 * 300.00382 * 13 12 10 37 37 H 1.09000 * 109.46553 * 59.99905 * 13 12 10 38 38 H 1.07996 * 120.02634 * 359.97438 * 16 15 14 39 39 H 1.08001 * 119.97673 * 180.27610 * 17 16 15 40 40 H 1.09003 * 109.47145 * 125.01862 * 19 18 17 41 41 H 0.96702 * 114.00227 * 179.97438 * 20 19 18 42 42 H 1.48499 * 110.00189 * 300.00144 * 21 19 18 43 43 H 1.48496 * 110.00154 * 61.31979 * 21 19 18 44 44 H 1.08002 * 119.96913 * 180.02562 * 22 18 17 45 45 H 1.08001 * 120.02463 * 180.02562 * 23 22 18 46 46 H 1.09004 * 113.61657 * 156.33938 * 24 3 2 47 47 H 1.08996 * 113.61938 * 25.42946 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3141 2.0798 0.3226 5 6 3.3755 1.3720 0.7045 6 6 4.0061 1.0330 -0.6564 7 6 5.2920 1.8098 -0.9466 8 8 5.7167 1.5450 -2.2851 9 7 4.1437 -0.4054 -0.8977 10 6 4.8361 -1.1707 -0.0310 11 8 5.4169 -0.6571 0.9016 12 6 4.8889 -2.6648 -0.2209 13 6 5.6277 -2.9880 -1.5211 14 8 5.5786 -3.2608 0.8798 15 6 5.3229 -4.5717 1.1312 16 6 4.3720 -5.2501 0.3828 17 6 4.1177 -6.5839 0.6370 18 6 4.8025 -7.2400 1.6433 19 6 4.5190 -8.6936 1.9221 20 8 3.9507 -8.8263 3.2264 21 14 3.3216 -9.3473 0.6534 22 6 5.7466 -6.5644 2.3943 23 6 6.0083 -5.2320 2.1406 24 6 2.7534 1.6488 -1.3018 25 1 -0.3634 0.5137 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 3.5169 0.5959 1.4566 29 1 3.6310 2.3671 1.0684 30 1 5.1060 2.8773 -0.8289 31 1 6.0701 1.4975 -0.2501 32 1 6.5285 2.0054 -2.5385 33 1 3.7397 -0.8063 -1.6832 34 1 3.8745 -3.0607 -0.2713 35 1 5.6662 -4.0686 -1.6581 36 1 5.1016 -2.5334 -2.3605 37 1 6.6420 -2.5921 -1.4705 38 1 3.8337 -4.7369 -0.4002 39 1 3.3807 -7.1138 0.0517 40 1 5.4482 -9.2613 1.8711 41 1 3.7418 -9.7375 3.4737 42 1 2.0506 -8.5816 0.7127 43 1 3.9137 -9.2442 -0.7044 44 1 6.2805 -7.0792 3.1795 45 1 6.7461 -4.7049 2.7273 46 1 2.8389 2.7197 -1.4863 47 1 2.3927 1.0963 -2.1693 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_10157680.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:36 Heat of formation + Delta-G solvation = -122.733855 kcal Electronic energy + Delta-G solvation = -30414.622335 eV Core-core repulsion = 26145.523570 eV Total energy + Delta-G solvation = -4269.098765 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.00200 -41.28464 -39.81407 -38.75079 -37.88595 -37.15164 -36.55618 -34.44908 -32.87781 -31.84736 -31.48770 -28.99253 -27.43963 -26.93525 -26.64910 -25.50093 -24.24322 -23.35783 -22.27429 -21.31358 -20.30451 -19.40522 -18.57941 -18.34052 -18.22292 -17.69829 -17.04078 -16.82711 -16.74603 -16.65166 -16.55795 -16.15290 -15.78310 -15.63750 -15.41561 -15.19320 -14.91648 -14.64400 -14.52586 -14.20001 -13.83035 -13.78470 -13.60830 -13.55513 -13.41389 -13.36312 -13.30527 -12.87647 -12.79207 -12.30046 -12.26864 -12.16125 -11.97852 -11.86105 -11.69008 -11.56638 -11.04317 -10.62868 -10.49929 -10.27237 -9.99210 -9.94894 -9.12226 -4.96773 0.33164 0.35264 1.30203 1.53939 1.64239 1.65584 1.97704 2.47931 2.64369 2.68280 2.97146 3.40490 3.44322 3.48612 3.52429 3.62223 3.72752 3.77037 3.82137 3.90171 4.00998 4.01908 4.25244 4.26969 4.34639 4.36516 4.36969 4.38825 4.41107 4.52754 4.53357 4.57297 4.59656 4.63878 4.71057 4.73071 4.75278 4.97581 4.97858 4.99596 5.05070 5.22606 5.30111 5.54991 5.55970 5.73411 6.15799 6.33798 6.53785 6.62592 6.66287 7.25909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.365 6.365 3 C 0.062 3.938 4 H 0.081 0.919 5 C -0.138 4.138 6 C 0.165 3.835 7 C 0.074 3.926 8 O -0.568 6.568 9 N -0.686 5.686 10 C 0.529 3.471 11 O -0.516 6.516 12 C 0.066 3.934 13 C -0.175 4.175 14 O -0.282 6.282 15 C 0.139 3.861 16 C -0.207 4.207 17 C -0.081 4.081 18 C -0.115 4.115 19 C -0.066 4.066 20 O -0.546 6.546 21 Si 0.680 3.320 22 C -0.048 4.048 23 C -0.146 4.146 24 C -0.150 4.150 25 H 0.043 0.957 26 H 0.087 0.913 27 H 0.044 0.956 28 H 0.093 0.907 29 H 0.105 0.895 30 H 0.056 0.944 31 H 0.059 0.941 32 H 0.380 0.620 33 H 0.404 0.596 34 H 0.100 0.900 35 H 0.075 0.925 36 H 0.080 0.920 37 H 0.076 0.924 38 H 0.133 0.867 39 H 0.120 0.880 40 H 0.073 0.927 41 H 0.381 0.619 42 H -0.252 1.252 43 H -0.255 1.255 44 H 0.136 0.864 45 H 0.137 0.863 46 H 0.106 0.894 47 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.733 -1.046 -3.247 4.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.284 6.284 3 C 0.003 3.997 4 H 0.099 0.901 5 C -0.177 4.177 6 C 0.078 3.922 7 C -0.005 4.005 8 O -0.374 6.374 9 N -0.339 5.339 10 C 0.314 3.686 11 O -0.390 6.390 12 C 0.006 3.994 13 C -0.233 4.233 14 O -0.194 6.194 15 C 0.093 3.907 16 C -0.225 4.225 17 C -0.098 4.098 18 C -0.115 4.115 19 C -0.177 4.177 20 O -0.352 6.352 21 Si 0.582 3.418 22 C -0.066 4.066 23 C -0.164 4.164 24 C -0.188 4.188 25 H 0.062 0.938 26 H 0.105 0.895 27 H 0.062 0.938 28 H 0.111 0.889 29 H 0.124 0.876 30 H 0.074 0.926 31 H 0.077 0.923 32 H 0.227 0.773 33 H 0.240 0.760 34 H 0.117 0.883 35 H 0.094 0.906 36 H 0.099 0.901 37 H 0.095 0.905 38 H 0.150 0.850 39 H 0.137 0.863 40 H 0.091 0.909 41 H 0.229 0.771 42 H -0.177 1.177 43 H -0.180 1.180 44 H 0.153 0.847 45 H 0.155 0.845 46 H 0.124 0.876 47 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.026 -0.250 -3.169 4.389 hybrid contribution 0.305 0.747 -0.449 0.923 sum -2.722 0.497 -3.618 4.554 Atomic orbital electron populations 1.22848 0.80612 1.03029 1.00212 1.87904 1.19842 1.26124 1.94489 1.23093 0.94663 0.85730 0.96172 0.90108 1.23528 0.93429 1.03901 0.96798 1.21142 0.93276 0.80595 0.97160 1.22491 0.96180 0.97627 0.84195 1.86438 1.47212 1.73884 1.29839 1.45167 1.55090 1.06855 1.26806 1.19864 0.78671 0.87631 0.82481 1.90730 1.43026 1.74188 1.31046 1.22197 0.98142 0.91800 0.87292 1.22320 1.02393 1.03681 0.94883 1.86227 1.63689 1.21425 1.48089 1.19048 0.93942 0.83052 0.94651 1.21130 1.01816 0.95594 1.03977 1.20649 0.98017 0.94062 0.97116 1.19236 0.99375 0.94662 0.98213 1.24601 1.03840 0.95830 0.93382 1.86507 1.84107 1.32737 1.31873 0.95400 0.79480 0.89503 0.77423 1.20833 0.95611 0.92838 0.97284 1.20524 1.02539 0.94492 0.98870 1.23764 0.94546 1.02051 0.98430 0.93811 0.89462 0.93757 0.88889 0.87629 0.92558 0.92316 0.77286 0.76040 0.88274 0.90591 0.90135 0.90469 0.84983 0.86257 0.90910 0.77137 1.17652 1.18030 0.84659 0.84477 0.87590 0.89872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.46 10.13 -35.23 -0.36 -0.82 16 3 C 0.06 -0.01 4.37 -25.92 -0.11 -0.12 16 4 H 0.08 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.14 -0.14 6.72 -25.92 -0.17 -0.32 16 6 C 0.17 0.14 0.76 -131.01 -0.10 0.04 16 7 C 0.07 0.05 6.40 37.16 0.24 0.29 16 8 O -0.57 -0.36 13.54 -35.23 -0.48 -0.84 16 9 N -0.69 -0.88 4.47 -46.85 -0.21 -1.09 16 10 C 0.53 1.99 6.69 -10.98 -0.07 1.91 16 11 O -0.52 -3.84 14.42 -14.30 -0.21 -4.05 16 12 C 0.07 0.14 2.66 -27.88 -0.07 0.07 16 13 C -0.18 -0.02 9.19 37.16 0.34 0.33 16 14 O -0.28 -1.41 9.35 -39.29 -0.37 -1.78 16 15 C 0.14 0.58 6.53 -39.22 -0.26 0.32 16 16 C -0.21 -0.60 8.32 -39.43 -0.33 -0.93 16 17 C -0.08 -0.26 8.66 -39.60 -0.34 -0.60 16 18 C -0.11 -0.36 5.39 -104.60 -0.56 -0.92 16 19 C -0.07 -0.04 2.79 36.01 0.10 0.06 16 20 O -0.55 -0.47 12.81 -35.23 -0.45 -0.92 16 21 Si 0.68 -0.40 29.85 -169.99 -5.07 -5.48 16 22 C -0.05 -0.14 9.68 -39.61 -0.38 -0.53 16 23 C -0.15 -0.54 9.99 -39.44 -0.39 -0.93 16 24 C -0.15 0.14 7.23 -25.92 -0.19 -0.05 16 25 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 26 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.09 0.38 6.80 -51.93 -0.35 0.02 16 29 H 0.11 -0.09 8.10 -51.93 -0.42 -0.51 16 30 H 0.06 -0.07 8.09 -51.93 -0.42 -0.49 16 31 H 0.06 0.15 7.45 -51.93 -0.39 -0.23 16 32 H 0.38 -1.13 9.12 45.56 0.42 -0.71 16 33 H 0.40 -0.21 8.36 -40.82 -0.34 -0.55 16 34 H 0.10 0.05 6.01 -51.93 -0.31 -0.26 16 35 H 0.08 -0.02 7.29 -51.93 -0.38 -0.40 16 36 H 0.08 -0.15 7.77 -51.93 -0.40 -0.56 16 37 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 38 H 0.13 0.09 5.68 -52.49 -0.30 -0.21 16 39 H 0.12 0.28 4.86 -52.49 -0.26 0.02 16 40 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 41 H 0.38 -1.64 8.74 45.56 0.40 -1.24 16 42 H -0.25 -0.64 7.05 56.52 0.40 -0.24 16 43 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 44 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 45 H 0.14 0.37 8.06 -52.49 -0.42 -0.05 16 46 H 0.11 -0.25 8.06 -51.93 -0.42 -0.67 16 47 H 0.08 -0.07 8.12 -51.93 -0.42 -0.49 16 LS Contribution 383.90 15.07 5.79 5.79 Total: 0.00 -10.53 383.90 -8.72 -19.25 By element: Atomic # 1 Polarization: -3.59 SS G_CDS: -6.16 Total: -9.75 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -1.21 Total: -0.31 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.21 Total: -1.09 kcal Atomic # 8 Polarization: -6.55 SS G_CDS: -1.86 Total: -8.40 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.07 Total: -5.48 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -10.53 -8.72 -19.25 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_10157680.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.482 kcal (2) G-P(sol) polarization free energy of solvation -10.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.009 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.725 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.251 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.734 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds