Wall clock time and date at job start Sun Mar 7 2021 09:02:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42901 * 114.00229 * 2 1 4 4 H 1.09001 * 112.84654 * 341.19758 * 3 2 1 5 5 C 1.53953 * 113.74288 * 112.39684 * 3 2 1 6 6 C 1.53781 * 87.02026 * 139.94812 * 5 3 2 7 7 C 1.53000 * 113.61456 * 89.22708 * 6 5 3 8 8 O 1.42900 * 109.46778 * 76.44095 * 7 6 5 9 9 N 1.46501 * 113.61801 * 220.05232 * 6 5 3 10 10 C 1.34776 * 119.99977 * 172.33768 * 9 6 5 11 11 O 1.21690 * 119.99953 * 355.31064 * 10 9 6 12 12 C 1.46679 * 119.99592 * 175.29991 * 10 9 6 13 13 C 1.37871 * 126.22856 * 180.02562 * 12 10 9 14 14 C 1.39836 * 107.08163 * 179.97438 * 13 12 10 15 15 C 1.50706 * 126.06411 * 180.02562 * 14 13 12 16 16 O 1.42895 * 109.47513 * 64.99616 * 15 14 13 17 17 Si 1.86301 * 109.46884 * 184.99631 * 15 14 13 18 18 C 1.35449 * 107.86733 * 0.25656 * 14 13 12 19 19 N 1.35535 * 108.86709 * 359.57552 * 18 14 13 20 20 C 1.53772 * 113.61711 * 210.00036 * 3 2 1 21 21 H 1.09008 * 109.47086 * 179.97438 * 1 2 3 22 22 H 1.08990 * 109.47087 * 299.99726 * 1 2 3 23 23 H 1.09008 * 109.46840 * 60.00088 * 1 2 3 24 24 H 1.09004 * 113.61124 * 25.43203 * 5 3 2 25 25 H 1.08996 * 113.67249 * 254.47642 * 5 3 2 26 26 H 1.08998 * 109.46941 * 196.43764 * 7 6 5 27 27 H 1.08998 * 109.47170 * 316.44187 * 7 6 5 28 28 H 0.96693 * 114.00445 * 180.02562 * 8 7 6 29 29 H 0.96999 * 119.99786 * 352.34601 * 9 6 5 30 30 H 1.08004 * 126.46266 * 359.94139 * 13 12 10 31 31 H 1.09006 * 109.46994 * 304.99168 * 15 14 13 32 32 H 0.96705 * 114.00318 * 59.99655 * 16 15 14 33 33 H 1.48495 * 110.00165 * 58.67898 * 17 15 14 34 34 H 1.48505 * 110.00021 * 179.97438 * 17 15 14 35 35 H 1.07997 * 125.56408 * 179.73281 * 18 14 13 36 36 H 0.97006 * 125.66903 * 180.16647 * 19 18 14 37 37 H 1.09002 * 113.61343 * 105.38814 * 20 3 2 38 38 H 1.08998 * 113.69212 * 334.49313 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7530 1.6533 1.3029 6 6 3.8220 2.3199 0.4211 7 6 3.5414 3.7950 0.1273 8 8 3.8604 4.5790 1.2787 9 7 5.1929 2.0819 0.8796 10 6 6.2351 2.4738 0.1202 11 8 6.0395 2.9476 -0.9835 12 6 7.6050 2.3294 0.6242 13 6 8.7594 2.6863 -0.0398 14 6 9.8308 2.3766 0.8037 15 6 11.2909 2.5934 0.4994 16 8 11.5509 3.9938 0.3852 17 14 12.3245 1.8801 1.8755 18 6 9.3239 1.8424 1.9405 19 7 7.9721 1.8137 1.8464 20 6 3.3755 1.3719 -0.7045 21 1 -0.3634 -1.0277 -0.0005 22 1 -0.3633 0.5137 0.8899 23 1 -0.3633 0.5139 -0.8901 24 1 3.1164 0.7801 1.8448 25 1 2.2137 2.3540 1.9403 26 1 4.1527 4.1204 -0.7145 27 1 2.4872 3.9224 -0.1184 28 1 3.7063 5.5267 1.1642 29 1 5.3505 1.6421 1.7297 30 1 8.8240 3.1223 -1.0258 31 1 11.5438 2.0991 -0.4386 32 1 11.3482 4.4981 1.1851 33 1 12.0398 0.4304 2.0256 34 1 13.7665 2.0869 1.5872 35 1 9.9023 1.4983 2.7851 36 1 7.3648 1.4811 2.5257 37 1 3.3381 1.8458 -1.6853 38 1 3.9105 0.4223 -0.7133 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_10543058.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:38 Heat of formation + Delta-G solvation = -84.840678 kcal Electronic energy + Delta-G solvation = -22642.528066 eV Core-core repulsion = 19067.630132 eV Total energy + Delta-G solvation = -3574.897934 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.130 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.53091 -41.54627 -39.60416 -37.97675 -37.62568 -36.71852 -34.45939 -32.46533 -30.73688 -28.69473 -27.32530 -26.90339 -26.54757 -24.93098 -23.17434 -21.20621 -20.76414 -20.34621 -19.81838 -18.60816 -18.08996 -17.47360 -17.04393 -16.91987 -16.45744 -16.21391 -15.99890 -15.87467 -15.63378 -15.26237 -15.16561 -14.70603 -14.48087 -14.37491 -13.93461 -13.73527 -13.53055 -13.47097 -13.17824 -12.71038 -12.50142 -12.26378 -11.98502 -11.94073 -11.80177 -11.47399 -10.78062 -10.54343 -10.33239 -10.28474 -9.95727 -9.28587 -4.92998 0.37012 1.42140 1.52674 1.74406 1.87911 2.08992 2.12492 2.26607 2.83926 2.93365 3.22387 3.50275 3.63300 3.68629 3.78449 3.94646 3.98767 4.16151 4.16820 4.32513 4.37717 4.45738 4.53320 4.55849 4.60211 4.63403 4.66217 4.80952 4.86237 4.87252 4.90584 4.97605 5.03439 5.35685 5.58811 5.73460 6.20136 6.34752 6.51796 6.73310 6.90753 7.06124 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.397 6.397 3 C 0.066 3.934 4 H 0.109 0.891 5 C -0.137 4.137 6 C 0.155 3.845 7 C 0.083 3.917 8 O -0.579 6.579 9 N -0.696 5.696 10 C 0.592 3.408 11 O -0.567 6.567 12 C -0.070 4.070 13 C -0.106 4.106 14 C -0.228 4.228 15 C -0.052 4.052 16 O -0.566 6.566 17 Si 0.803 3.197 18 C 0.059 3.941 19 N -0.516 5.516 20 C -0.137 4.137 21 H 0.092 0.908 22 H 0.054 0.946 23 H 0.051 0.949 24 H 0.103 0.897 25 H 0.094 0.906 26 H 0.047 0.953 27 H 0.077 0.923 28 H 0.397 0.603 29 H 0.409 0.591 30 H 0.123 0.877 31 H 0.091 0.909 32 H 0.393 0.607 33 H -0.275 1.275 34 H -0.309 1.309 35 H 0.217 0.783 36 H 0.436 0.564 37 H 0.074 0.926 38 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.009 -0.425 8.211 9.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.315 6.315 3 C 0.008 3.992 4 H 0.126 0.874 5 C -0.175 4.175 6 C 0.068 3.932 7 C 0.004 3.996 8 O -0.387 6.387 9 N -0.347 5.347 10 C 0.381 3.619 11 O -0.446 6.446 12 C -0.183 4.183 13 C -0.133 4.133 14 C -0.234 4.234 15 C -0.162 4.162 16 O -0.373 6.373 17 Si 0.708 3.292 18 C -0.079 4.079 19 N -0.113 5.113 20 C -0.176 4.176 21 H 0.111 0.889 22 H 0.073 0.927 23 H 0.069 0.931 24 H 0.121 0.879 25 H 0.112 0.888 26 H 0.065 0.935 27 H 0.095 0.905 28 H 0.247 0.753 29 H 0.246 0.754 30 H 0.141 0.859 31 H 0.108 0.892 32 H 0.243 0.757 33 H -0.202 1.202 34 H -0.238 1.238 35 H 0.234 0.766 36 H 0.277 0.723 37 H 0.093 0.907 38 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -3.316 -1.623 7.400 8.269 hybrid contribution -0.663 0.428 -0.812 1.132 sum -3.978 -1.195 6.588 7.788 Atomic orbital electron populations 1.22995 0.79520 1.03827 1.01041 1.87920 1.21456 1.27536 1.94628 1.23654 0.93584 0.85875 0.96092 0.87355 1.23758 0.95432 1.00972 0.97341 1.21444 0.81139 0.93479 0.97104 1.22211 1.00019 0.89041 0.88303 1.86364 1.90470 1.23871 1.37994 1.45516 1.04580 1.60977 1.23626 1.17218 0.83437 0.77035 0.84189 1.90798 1.85424 1.47047 1.21378 1.20179 0.93412 1.14469 0.90214 1.21206 0.90929 1.01516 0.99654 1.19952 0.95929 1.10907 0.96631 1.24746 0.95228 0.86755 1.09423 1.86452 1.88608 1.18552 1.43730 0.93912 0.74547 0.78169 0.82566 1.22398 0.82834 1.02401 1.00243 1.41885 1.07827 1.47414 1.14205 1.23586 0.95970 0.99525 0.98505 0.88938 0.92716 0.93069 0.87901 0.88767 0.93472 0.90487 0.75314 0.75428 0.85915 0.89189 0.75703 1.20166 1.23759 0.76636 0.72305 0.90704 0.89399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -1.01 10.72 -148.98 -1.60 -2.60 16 3 C 0.07 -0.06 3.96 31.18 0.12 0.07 16 4 H 0.11 -0.47 7.34 -2.39 -0.02 -0.49 16 5 C -0.14 0.37 7.21 31.18 0.22 0.59 16 6 C 0.15 0.14 0.86 4.13 0.00 0.14 16 7 C 0.08 0.11 6.01 71.98 0.43 0.54 16 8 O -0.58 -0.54 13.53 -148.98 -2.02 -2.55 16 9 N -0.70 -0.62 5.16 -424.43 -2.19 -2.81 16 10 C 0.59 4.46 7.45 86.45 0.64 5.11 16 11 O -0.57 -8.75 15.04 -4.32 -0.06 -8.81 16 12 C -0.07 -0.32 7.05 40.35 0.28 -0.03 16 13 C -0.11 -0.83 10.59 22.57 0.24 -0.59 16 14 C -0.23 -0.39 5.43 -20.12 -0.11 -0.50 16 15 C -0.05 -0.08 3.02 71.24 0.22 0.13 16 16 O -0.57 -2.04 12.88 -148.98 -1.92 -3.96 16 17 Si 0.80 -3.05 30.60 68.60 2.10 -0.95 16 18 C 0.06 -0.30 10.45 83.48 0.87 0.57 16 19 N -0.52 2.35 5.99 -183.63 -1.10 1.25 16 20 C -0.14 -0.36 7.02 31.12 0.22 -0.14 16 21 H 0.09 -0.38 8.14 -2.38 -0.02 -0.40 16 22 H 0.05 -0.28 8.14 -2.39 -0.02 -0.30 16 23 H 0.05 -0.22 8.14 -2.38 -0.02 -0.24 16 24 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 25 H 0.09 -0.38 8.10 -2.39 -0.02 -0.40 16 26 H 0.05 0.32 6.54 -2.39 -0.02 0.30 16 27 H 0.08 -0.26 7.32 -2.39 -0.02 -0.28 16 28 H 0.40 -2.47 9.12 -74.06 -0.68 -3.14 16 29 H 0.41 -2.15 7.80 -92.71 -0.72 -2.87 16 30 H 0.12 1.48 8.06 -2.91 -0.02 1.46 16 31 H 0.09 0.42 7.96 -2.38 -0.02 0.41 16 32 H 0.39 -2.05 8.70 -74.05 -0.64 -2.69 16 33 H -0.28 0.19 7.11 99.48 0.71 0.90 16 34 H -0.31 -1.58 7.11 99.48 0.71 -0.87 16 35 H 0.22 -2.97 6.20 -2.91 -0.02 -2.99 16 36 H 0.44 -5.14 8.20 -92.70 -0.76 -5.90 16 37 H 0.07 0.32 8.10 -2.39 -0.02 0.30 16 38 H 0.09 0.44 8.14 -2.39 -0.02 0.42 16 Total: 0.00 -26.51 322.17 -4.04 -30.55 By element: Atomic # 1 Polarization: -15.53 SS G_CDS: -1.64 Total: -17.17 kcal Atomic # 6 Polarization: 2.68 SS G_CDS: 4.38 Total: 7.06 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -3.29 Total: -1.56 kcal Atomic # 8 Polarization: -12.33 SS G_CDS: -5.60 Total: -17.93 kcal Atomic # 14 Polarization: -3.05 SS G_CDS: 2.10 Total: -0.95 kcal Total: -26.51 -4.04 -30.55 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_10543058.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.289 kcal (2) G-P(sol) polarization free energy of solvation -26.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.044 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.552 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds