Wall clock time and date at job start Sun Mar 7 2021 09:02:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35652 * 117.00205 * 2 1 4 4 C 1.38397 * 120.12390 * 0.02562 * 3 2 1 5 5 C 1.38732 * 120.03472 * 180.02562 * 4 3 2 6 6 O 1.35715 * 119.86092 * 179.97438 * 5 4 3 7 7 C 1.42896 * 117.00168 * 0.02562 * 6 5 4 8 8 C 1.39136 * 120.27136 * 359.97438 * 5 4 3 9 9 C 1.50699 * 119.88193 * 180.02562 * 8 5 4 10 10 O 1.42906 * 109.47005 * 74.99600 * 9 8 5 11 11 Si 1.86294 * 109.47758 * 195.00175 * 9 8 5 12 12 C 1.37588 * 120.24607 * 359.74206 * 8 5 4 13 13 C 1.39820 * 119.95570 * 0.53640 * 12 8 5 14 14 C 1.47305 * 120.13131 * 179.74783 * 13 12 8 15 15 O 1.21626 * 119.99979 * 179.72276 * 14 13 12 16 16 N 1.34771 * 120.00303 * 359.71627 * 14 13 12 17 17 C 1.46496 * 120.00346 * 185.09660 * 16 14 13 18 18 C 1.53004 * 112.84917 * 64.95727 * 17 16 14 19 19 O 1.42901 * 109.46954 * 43.94628 * 18 17 16 20 20 C 1.53783 * 113.69175 * 196.22834 * 17 16 14 21 21 C 1.53774 * 87.08216 * 89.12898 * 20 17 16 22 22 H 1.08995 * 113.61706 * 139.97934 * 21 20 17 23 23 O 1.42906 * 113.69000 * 270.87475 * 21 20 17 24 24 C 1.42900 * 113.99800 * 247.53725 * 23 21 20 25 25 C 1.53781 * 87.08318 * 25.43248 * 21 20 17 26 26 H 1.08990 * 109.47707 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46819 * 299.99998 * 1 2 3 28 28 H 1.09006 * 109.47132 * 59.99563 * 1 2 3 29 29 H 1.08003 * 119.98054 * 359.97359 * 4 3 2 30 30 H 1.08999 * 109.47140 * 299.99803 * 7 6 5 31 31 H 1.08998 * 109.47467 * 59.99810 * 7 6 5 32 32 H 1.08994 * 109.47066 * 180.02562 * 7 6 5 33 33 H 1.09007 * 109.47097 * 315.00201 * 9 8 5 34 34 H 0.96696 * 113.99628 * 60.00272 * 10 9 8 35 35 H 1.48502 * 110.00174 * 58.67782 * 11 9 8 36 36 H 1.48498 * 110.00339 * 180.02562 * 11 9 8 37 37 H 1.07998 * 120.02554 * 180.27833 * 12 8 5 38 38 H 0.97005 * 120.00123 * 5.09748 * 16 14 13 39 39 H 1.08989 * 109.47075 * 283.94502 * 18 17 16 40 40 H 1.08997 * 109.47072 * 163.94083 * 18 17 16 41 41 H 0.96696 * 114.00205 * 180.02562 * 19 18 17 42 42 H 1.08998 * 113.61236 * 203.67688 * 20 17 16 43 43 H 1.08997 * 113.61295 * 334.57585 * 20 17 16 44 44 H 1.09003 * 109.47102 * 180.02562 * 24 23 21 45 45 H 1.08999 * 109.46959 * 299.99825 * 24 23 21 46 46 H 1.09000 * 109.47366 * 59.99621 * 24 23 21 47 47 H 1.09000 * 113.61489 * 220.02026 * 25 21 20 48 48 H 1.08994 * 113.61366 * 89.11813 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 1.2937 2.3710 0.0005 5 6 1.9255 3.6061 0.0000 6 8 1.1853 4.7437 0.0000 7 6 -0.2357 4.5932 0.0011 8 6 3.3147 3.6833 -0.0005 9 6 3.9918 5.0296 -0.0005 10 8 3.8948 5.6116 1.3010 11 14 5.7863 4.8223 -0.4559 12 6 4.0726 2.5350 0.0048 13 6 3.4462 1.2850 -0.0005 14 6 4.2539 0.0531 -0.0005 15 8 3.7065 -1.0330 0.0000 16 7 5.5994 0.1295 -0.0010 17 6 6.4024 -1.0906 -0.1136 18 6 6.2219 -1.7986 -1.4579 19 8 6.2469 -0.8337 -2.5116 20 6 7.8741 -0.9013 0.2903 21 6 7.4441 -1.2532 1.7241 22 1 8.1564 -1.8888 2.2500 23 8 7.0355 -0.1214 2.4951 24 6 7.9151 0.1933 3.5765 25 6 6.2722 -2.0279 1.0986 26 1 -0.3634 -1.0275 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 0.2150 2.3165 0.0005 30 1 -0.5435 4.0435 -0.8884 31 1 -0.5422 4.0444 0.8916 32 1 -0.7052 5.5768 0.0006 33 1 3.5056 5.6809 -0.7269 34 1 4.3072 5.0847 1.9991 35 1 5.9009 4.1887 -1.7941 36 1 6.4655 6.1429 -0.4589 37 1 5.1507 2.5991 0.0089 38 1 6.0363 0.9924 0.0732 39 1 5.2661 -2.3222 -1.4673 40 1 7.0303 -2.5154 -1.6024 41 1 6.1374 -1.2125 -3.3945 42 1 8.5470 -1.6336 -0.1559 43 1 8.2288 0.1234 0.1798 44 1 7.5353 1.0632 4.1124 45 1 7.9723 -0.6560 4.2573 46 1 8.9084 0.4125 3.1849 47 1 5.3336 -1.9126 1.6408 48 1 6.5071 -3.0681 0.8735 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_12297780.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:51 Heat of formation + Delta-G solvation = -161.635822 kcal Electronic energy + Delta-G solvation = -34060.177382 eV Core-core repulsion = 29470.709509 eV Total energy + Delta-G solvation = -4589.467873 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.165 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.16688 -41.43535 -40.16123 -39.33194 -38.43717 -37.78174 -36.95038 -36.47607 -34.04454 -32.22988 -31.55761 -29.00018 -28.88782 -28.10206 -27.18664 -26.76080 -26.12985 -24.88191 -23.41878 -22.63555 -21.51200 -20.26824 -19.97233 -18.81590 -18.21454 -18.12669 -17.93964 -17.50077 -17.21203 -16.83601 -16.60947 -16.56479 -16.37251 -16.27555 -15.94509 -15.78448 -15.68518 -15.64558 -15.39448 -15.06625 -14.72328 -14.48830 -14.20982 -13.99674 -13.62219 -13.49718 -13.28298 -13.19904 -13.13715 -12.67486 -12.62645 -12.54075 -12.51754 -12.27695 -12.07859 -12.00091 -11.83833 -11.64185 -11.42223 -11.02296 -10.55017 -10.42163 -10.39847 -9.95660 -9.85335 -9.17003 -5.05573 -0.23138 0.08406 1.28760 1.63536 1.82274 1.95930 2.11069 2.13983 2.19163 2.66465 2.82530 3.18220 3.45178 3.51345 3.54878 3.63216 3.69627 3.74905 3.81686 3.89966 4.11743 4.16405 4.21180 4.25148 4.25896 4.26658 4.27880 4.42359 4.49051 4.53563 4.60913 4.62169 4.64689 4.68010 4.71502 4.73528 4.77502 4.80118 4.92482 4.93166 5.00940 5.01609 5.13158 5.14530 5.30418 5.70296 6.03217 6.29605 6.39480 6.67287 6.82383 6.84263 7.38930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.302 6.302 3 C 0.217 3.783 4 C -0.311 4.311 5 C 0.211 3.789 6 O -0.314 6.314 7 C 0.012 3.988 8 C -0.205 4.205 9 C -0.056 4.056 10 O -0.552 6.552 11 Si 0.764 3.236 12 C 0.008 3.992 13 C -0.224 4.224 14 C 0.570 3.430 15 O -0.561 6.561 16 N -0.682 5.682 17 C 0.151 3.849 18 C 0.077 3.923 19 O -0.582 6.582 20 C -0.141 4.141 21 C 0.065 3.935 22 H 0.097 0.903 23 O -0.384 6.384 24 C 0.025 3.975 25 C -0.142 4.142 26 H 0.114 0.886 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.163 0.837 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.119 0.881 33 H 0.100 0.900 34 H 0.392 0.608 35 H -0.281 1.281 36 H -0.288 1.288 37 H 0.160 0.840 38 H 0.407 0.593 39 H 0.033 0.967 40 H 0.079 0.921 41 H 0.391 0.609 42 H 0.125 0.875 43 H 0.089 0.911 44 H 0.094 0.906 45 H 0.043 0.957 46 H 0.056 0.944 47 H 0.057 0.943 48 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.461 -1.331 1.666 3.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.213 6.213 3 C 0.167 3.833 4 C -0.330 4.330 5 C 0.163 3.837 6 O -0.226 6.226 7 C -0.082 4.082 8 C -0.206 4.206 9 C -0.165 4.165 10 O -0.359 6.359 11 Si 0.668 3.332 12 C -0.010 4.010 13 C -0.228 4.228 14 C 0.359 3.641 15 O -0.441 6.441 16 N -0.333 5.333 17 C 0.064 3.936 18 C -0.002 4.002 19 O -0.389 6.389 20 C -0.179 4.179 21 C 0.007 3.993 22 H 0.115 0.885 23 O -0.303 6.303 24 C -0.071 4.071 25 C -0.181 4.181 26 H 0.132 0.868 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.180 0.820 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.137 0.863 33 H 0.117 0.883 34 H 0.242 0.758 35 H -0.207 1.207 36 H -0.215 1.215 37 H 0.177 0.823 38 H 0.244 0.756 39 H 0.051 0.949 40 H 0.097 0.903 41 H 0.240 0.760 42 H 0.144 0.856 43 H 0.107 0.893 44 H 0.113 0.887 45 H 0.061 0.939 46 H 0.074 0.926 47 H 0.075 0.925 48 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 2.429 -0.926 1.228 2.875 hybrid contribution -1.234 -0.072 -0.650 1.396 sum 1.195 -0.998 0.578 1.660 Atomic orbital electron populations 1.23459 0.76657 1.05721 1.02526 1.86363 1.23063 1.25781 1.86096 1.18946 0.91016 0.84710 0.88603 1.21407 1.01942 0.90756 1.18932 1.18898 0.90883 0.84925 0.88979 1.86136 1.21075 1.28716 1.86631 1.23457 0.76298 1.05826 1.02589 1.19584 0.90974 0.96672 1.13353 1.24970 1.10897 0.91602 0.89071 1.86495 1.82621 1.50123 1.16681 0.94234 0.74441 0.81223 0.83264 1.20817 0.99438 0.89024 0.91699 1.19247 0.90939 0.94118 1.18500 1.17867 0.82300 0.88258 0.75693 1.90768 1.72300 1.29859 1.51141 1.45128 1.04596 1.09578 1.73992 1.21375 0.93022 0.86306 0.92913 1.22494 1.00346 0.90790 0.86545 1.86426 1.96572 1.37255 1.18630 1.23831 0.93545 1.04931 0.95551 1.23101 0.96176 0.88146 0.91900 0.88521 1.87898 1.50364 1.47706 1.44300 1.22975 0.94232 1.01239 0.88642 1.23584 0.99357 0.99476 0.95644 0.86817 0.91092 0.91236 0.81962 0.91319 0.91228 0.86267 0.88253 0.75818 1.20704 1.21518 0.82287 0.75607 0.94910 0.90253 0.76020 0.85641 0.89269 0.88716 0.93877 0.92585 0.92453 0.86515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.81 113.37 1.11 1.12 16 2 O -0.30 -3.17 8.56 -68.71 -0.59 -3.76 16 3 C 0.22 1.94 6.70 22.82 0.15 2.09 16 4 C -0.31 -1.38 8.01 22.43 0.18 -1.20 16 5 C 0.21 1.16 6.67 22.60 0.15 1.31 16 6 O -0.31 -1.54 9.80 -90.37 -0.89 -2.43 16 7 C 0.01 -0.04 9.80 113.37 1.11 1.08 16 8 C -0.20 -0.86 5.27 -19.80 -0.10 -0.96 16 9 C -0.06 -0.16 2.37 71.24 0.17 0.01 16 10 O -0.55 -1.73 12.88 -148.98 -1.92 -3.65 16 11 Si 0.76 -0.31 29.91 68.60 2.05 1.74 16 12 C 0.01 0.03 8.13 22.50 0.18 0.21 16 13 C -0.22 -1.96 5.89 -20.00 -0.12 -2.07 16 14 C 0.57 6.43 7.31 86.63 0.63 7.07 16 15 O -0.56 -10.05 13.25 16.85 0.22 -9.82 16 16 N -0.68 -3.49 4.27 -423.87 -1.81 -5.30 16 17 C 0.15 0.39 0.83 4.13 0.00 0.40 16 18 C 0.08 0.22 6.26 71.98 0.45 0.67 16 19 O -0.58 -2.26 13.32 -148.98 -1.98 -4.24 16 20 C -0.14 0.50 7.20 31.12 0.22 0.72 16 21 C 0.06 -0.10 4.37 31.12 0.14 0.03 16 22 H 0.10 -0.52 7.87 -2.39 -0.02 -0.54 16 23 O -0.38 -0.39 10.14 -148.98 -1.51 -1.90 16 24 C 0.03 -0.11 10.85 113.37 1.23 1.12 16 25 C -0.14 -0.36 6.79 31.12 0.21 -0.15 16 26 H 0.11 -0.19 8.14 -2.39 -0.02 -0.21 16 27 H 0.07 -0.19 7.66 -2.39 -0.02 -0.21 16 28 H 0.07 -0.18 7.66 -2.38 -0.02 -0.19 16 29 H 0.16 -0.14 4.50 -2.91 -0.01 -0.15 16 30 H 0.07 -0.35 7.65 -2.39 -0.02 -0.37 16 31 H 0.07 -0.34 7.65 -2.39 -0.02 -0.36 16 32 H 0.12 -0.70 8.14 -2.39 -0.02 -0.72 16 33 H 0.10 0.55 7.82 -2.38 -0.02 0.53 16 34 H 0.39 -2.08 8.70 -74.06 -0.64 -2.72 16 35 H -0.28 -1.30 7.11 99.48 0.71 -0.59 16 36 H -0.29 -1.71 7.11 99.48 0.71 -1.00 16 37 H 0.16 -0.41 3.45 -2.91 -0.01 -0.42 16 38 H 0.41 0.33 6.70 -92.70 -0.62 -0.29 16 39 H 0.03 0.26 7.43 -2.39 -0.02 0.24 16 40 H 0.08 -0.23 7.85 -2.39 -0.02 -0.25 16 41 H 0.39 -1.29 9.12 -74.06 -0.68 -1.96 16 42 H 0.13 -0.96 7.90 -2.39 -0.02 -0.98 16 43 H 0.09 -0.37 8.09 -2.39 -0.02 -0.39 16 44 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 45 H 0.04 -0.20 8.14 -2.39 -0.02 -0.22 16 46 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 47 H 0.06 0.57 7.28 -2.39 -0.02 0.55 16 48 H 0.12 -0.17 8.10 -2.39 -0.02 -0.19 16 Total: 0.00 -27.79 388.71 -1.57 -29.36 By element: Atomic # 1 Polarization: -10.55 SS G_CDS: -0.87 Total: -11.42 kcal Atomic # 6 Polarization: 5.70 SS G_CDS: 5.73 Total: 11.42 kcal Atomic # 7 Polarization: -3.49 SS G_CDS: -1.81 Total: -5.30 kcal Atomic # 8 Polarization: -19.14 SS G_CDS: -6.66 Total: -25.80 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: 2.05 Total: 1.74 kcal Total: -27.79 -1.57 -29.36 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_12297780.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.276 kcal (2) G-P(sol) polarization free energy of solvation -27.793 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.360 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds