Wall clock time and date at job start Sun Mar 7 2021 09:02:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42900 * 114.00081 * 2 1 4 4 H 1.08994 * 112.84748 * 341.19849 * 3 2 1 5 5 C 1.54052 * 113.69312 * 112.47107 * 3 2 1 6 6 C 1.53781 * 86.98585 * 139.98907 * 5 3 2 7 7 C 1.52996 * 113.61563 * 89.16080 * 6 5 3 8 8 O 1.42898 * 109.47581 * 76.43321 * 7 6 5 9 9 N 1.46497 * 113.61240 * 219.97734 * 6 5 3 10 10 C 1.34779 * 119.99955 * 163.03865 * 9 6 5 11 11 O 1.21274 * 119.99864 * 4.62275 * 10 9 6 12 12 C 1.50707 * 119.99906 * 184.62190 * 10 9 6 13 13 C 1.50700 * 109.46777 * 180.02562 * 12 10 9 14 14 C 1.38232 * 119.99689 * 269.72347 * 13 12 10 15 15 C 1.38236 * 120.00087 * 179.77037 * 14 13 12 16 16 C 1.38241 * 119.99606 * 0.48484 * 15 14 13 17 17 C 1.50704 * 119.99825 * 179.77225 * 16 15 14 18 18 O 1.42899 * 109.47014 * 120.02277 * 17 16 15 19 19 Si 1.86295 * 109.47149 * 0.02562 * 17 16 15 20 20 C 1.38232 * 119.99970 * 359.78759 * 16 15 14 21 21 C 1.38235 * 119.99946 * 90.00088 * 13 12 10 22 22 C 1.53778 * 113.61229 * 209.99735 * 3 2 1 23 23 H 1.08998 * 109.47319 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.46968 * 300.00267 * 1 2 3 25 25 H 1.09000 * 109.46745 * 60.00207 * 1 2 3 26 26 H 1.09002 * 113.61723 * 25.48085 * 5 3 2 27 27 H 1.09009 * 113.69052 * 254.50391 * 5 3 2 28 28 H 1.09000 * 109.47416 * 196.43868 * 7 6 5 29 29 H 1.09003 * 109.47077 * 316.42964 * 7 6 5 30 30 H 0.96697 * 114.00158 * 179.97438 * 8 7 6 31 31 H 0.97003 * 119.99950 * 343.04342 * 9 6 5 32 32 H 1.09005 * 109.46635 * 299.99881 * 12 10 9 33 33 H 1.09001 * 109.46970 * 59.99873 * 12 10 9 34 34 H 1.07999 * 120.00156 * 0.02562 * 14 13 12 35 35 H 1.07995 * 120.00493 * 180.25082 * 15 14 13 36 36 H 1.09002 * 109.46595 * 240.01941 * 17 16 15 37 37 H 0.96699 * 113.99629 * 299.99063 * 18 17 16 38 38 H 1.48504 * 109.99582 * 58.68730 * 19 17 16 39 39 H 1.48503 * 109.99826 * 179.97438 * 19 17 16 40 40 H 1.08004 * 119.99713 * 179.97438 * 20 16 15 41 41 H 1.07998 * 120.00100 * 359.97438 * 21 13 12 42 42 H 1.09001 * 113.61410 * 105.38619 * 22 3 2 43 43 H 1.09000 * 113.69418 * 334.49757 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0788 -0.3237 5 6 2.7546 1.6517 1.3036 6 6 3.8221 2.3198 0.4210 7 6 3.5398 3.7947 0.1282 8 8 3.8589 4.5786 1.2796 9 7 5.1936 2.0830 0.8782 10 6 6.2293 2.3022 0.0440 11 8 6.0328 2.7746 -1.0555 12 6 7.6316 1.9603 0.4777 13 6 8.5964 2.2998 -0.6290 14 6 8.9141 1.3522 -1.5838 15 6 9.7955 1.6650 -2.6017 16 6 10.3670 2.9225 -2.6590 17 6 11.3318 3.2620 -3.7657 18 8 10.8222 4.3629 -4.5210 19 14 11.5397 1.7858 -4.8830 20 6 10.0536 3.8683 -1.7009 21 6 9.1682 3.5571 -0.6859 22 6 3.3756 1.3718 -0.7045 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 3.1190 0.7778 1.8436 27 1 2.2161 2.3514 1.9428 28 1 4.1498 4.1212 -0.7141 29 1 2.4852 3.9211 -0.1166 30 1 3.7045 5.5263 1.1653 31 1 5.3564 1.7684 1.7812 32 1 7.8858 2.5332 1.3695 33 1 7.6935 0.8950 0.7002 34 1 8.4705 0.3686 -1.5370 35 1 10.0406 0.9260 -3.3501 36 1 12.2968 3.5316 -3.3364 37 1 9.9638 4.1934 -4.9328 38 1 10.2257 1.3888 -5.4497 39 1 12.4885 2.1079 -5.9790 40 1 10.5004 4.8506 -1.7454 41 1 8.9231 4.2962 0.0625 42 1 3.3382 1.8456 -1.6854 43 1 3.9105 0.4221 -0.7133 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_12335836.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:57 Heat of formation + Delta-G solvation = -101.730557 kcal Electronic energy + Delta-G solvation = -25613.353277 eV Core-core repulsion = 21819.385094 eV Total energy + Delta-G solvation = -3793.968183 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.77001 -40.69100 -39.55233 -38.03295 -37.59356 -36.66278 -34.29909 -33.76133 -31.87360 -29.87972 -28.52953 -27.34533 -26.87783 -25.83821 -24.00329 -23.74722 -22.14055 -21.16167 -20.10598 -18.60263 -18.49302 -18.27734 -17.80885 -17.13241 -16.89055 -16.63709 -16.19408 -16.18138 -16.09214 -15.94260 -15.62855 -15.34793 -14.99353 -14.70751 -14.57622 -14.40885 -13.86639 -13.73669 -13.48649 -13.29609 -13.23670 -13.01612 -12.78566 -12.67298 -12.47752 -12.17569 -11.96481 -11.90029 -11.75840 -11.53049 -11.21871 -10.59981 -10.54858 -10.49729 -10.04417 -9.79497 -9.54839 -4.90987 0.30813 0.53472 1.34996 1.66592 1.72573 2.02045 2.08051 2.75710 2.86948 2.94790 3.25836 3.43691 3.49805 3.62363 3.64551 3.81581 3.87685 3.90301 3.98628 4.08581 4.20576 4.28160 4.30440 4.36716 4.39524 4.43792 4.53439 4.58885 4.61303 4.62529 4.68755 4.72261 4.75200 4.87945 4.93153 5.00590 5.05819 5.13800 5.44505 5.52895 5.60858 5.65602 6.06706 6.15704 6.46979 6.54076 6.58161 7.30762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.063 3.937 4 H 0.092 0.908 5 C -0.150 4.150 6 C 0.159 3.841 7 C 0.082 3.918 8 O -0.567 6.567 9 N -0.710 5.710 10 C 0.519 3.481 11 O -0.528 6.528 12 C -0.104 4.104 13 C -0.060 4.060 14 C -0.100 4.100 15 C -0.114 4.114 16 C -0.118 4.118 17 C -0.074 4.074 18 O -0.530 6.530 19 Si 0.683 3.317 20 C -0.091 4.091 21 C -0.104 4.104 22 C -0.128 4.128 23 H 0.088 0.912 24 H 0.043 0.957 25 H 0.043 0.957 26 H 0.099 0.901 27 H 0.083 0.917 28 H 0.068 0.932 29 H 0.053 0.947 30 H 0.382 0.618 31 H 0.403 0.597 32 H 0.104 0.896 33 H 0.105 0.895 34 H 0.124 0.876 35 H 0.126 0.874 36 H 0.118 0.882 37 H 0.376 0.624 38 H -0.261 1.261 39 H -0.258 1.258 40 H 0.125 0.875 41 H 0.122 0.878 42 H 0.082 0.918 43 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.066 -1.994 4.075 4.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.292 6.292 3 C 0.004 3.996 4 H 0.109 0.891 5 C -0.188 4.188 6 C 0.073 3.927 7 C 0.003 3.997 8 O -0.372 6.372 9 N -0.362 5.362 10 C 0.306 3.694 11 O -0.403 6.403 12 C -0.144 4.144 13 C -0.061 4.061 14 C -0.118 4.118 15 C -0.132 4.132 16 C -0.118 4.118 17 C -0.184 4.184 18 O -0.337 6.337 19 Si 0.585 3.415 20 C -0.109 4.109 21 C -0.122 4.122 22 C -0.166 4.166 23 H 0.106 0.894 24 H 0.062 0.938 25 H 0.062 0.938 26 H 0.118 0.882 27 H 0.101 0.899 28 H 0.086 0.914 29 H 0.071 0.929 30 H 0.229 0.771 31 H 0.238 0.762 32 H 0.123 0.877 33 H 0.123 0.877 34 H 0.142 0.858 35 H 0.144 0.856 36 H 0.135 0.865 37 H 0.224 0.776 38 H -0.185 1.185 39 H -0.183 1.183 40 H 0.143 0.857 41 H 0.140 0.860 42 H 0.101 0.899 43 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.476 -2.468 2.889 4.077 hybrid contribution -1.285 1.428 -0.021 1.922 sum -2.761 -1.040 2.869 4.115 Atomic orbital electron populations 1.22845 0.80717 1.03156 1.00134 1.87955 1.20020 1.26679 1.94505 1.23628 0.93915 0.85840 0.96227 0.89058 1.23845 0.96348 1.01017 0.97587 1.21287 0.81675 0.92985 0.96801 1.22265 0.99063 0.89486 0.88851 1.86422 1.90207 1.22472 1.38136 1.45769 1.04864 1.68921 1.16627 1.20526 0.86349 0.77589 0.84978 1.90712 1.85402 1.42782 1.21428 1.20701 0.90802 1.04339 0.98570 1.19262 0.96580 0.94301 0.95915 1.20904 0.97531 0.99321 0.94047 1.20931 0.97611 0.95874 0.98774 1.20259 0.99400 0.94556 0.97624 1.25025 0.98459 0.99206 0.95735 1.86583 1.40509 1.37919 1.68662 0.95081 0.82492 0.82099 0.81840 1.20949 0.97381 0.99121 0.93467 1.21013 0.96738 0.95742 0.98685 1.23531 0.94827 0.99933 0.98349 0.89370 0.93815 0.93808 0.88218 0.89852 0.91430 0.92865 0.77107 0.76171 0.87747 0.87670 0.85812 0.85640 0.86463 0.77586 1.18547 1.18332 0.85691 0.86050 0.89920 0.88186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.57 10.72 -35.23 -0.38 -0.94 16 3 C 0.06 -0.01 3.96 -25.78 -0.10 -0.11 16 4 H 0.09 -0.13 7.33 -51.93 -0.38 -0.51 16 5 C -0.15 0.10 7.24 -25.78 -0.19 -0.08 16 6 C 0.16 0.03 0.85 -131.01 -0.11 -0.08 16 7 C 0.08 0.04 6.16 37.16 0.23 0.26 16 8 O -0.57 -0.28 13.53 -35.23 -0.48 -0.75 16 9 N -0.71 0.20 5.12 -46.86 -0.24 -0.04 16 10 C 0.52 0.72 7.48 -10.98 -0.08 0.64 16 11 O -0.53 -2.68 14.31 5.56 0.08 -2.60 16 12 C -0.10 0.11 5.83 -29.03 -0.17 -0.05 16 13 C -0.06 -0.07 4.37 -104.63 -0.46 -0.53 16 14 C -0.10 -0.11 9.70 -39.58 -0.38 -0.49 16 15 C -0.11 -0.12 8.67 -39.58 -0.34 -0.47 16 16 C -0.12 -0.19 5.39 -104.62 -0.56 -0.75 16 17 C -0.07 -0.07 2.82 36.01 0.10 0.03 16 18 O -0.53 -1.37 12.77 -35.23 -0.45 -1.82 16 19 Si 0.68 0.08 29.79 -169.99 -5.06 -4.99 16 20 C -0.09 -0.18 9.61 -39.58 -0.38 -0.56 16 21 C -0.10 -0.17 9.70 -39.58 -0.38 -0.55 16 22 C -0.13 -0.10 6.66 -25.92 -0.17 -0.27 16 23 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 24 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.08 -0.07 8.10 -51.92 -0.42 -0.49 16 28 H 0.07 0.16 6.86 -51.93 -0.36 -0.20 16 29 H 0.05 -0.06 7.31 -51.93 -0.38 -0.44 16 30 H 0.38 -1.18 9.12 45.56 0.42 -0.77 16 31 H 0.40 -1.00 8.70 -40.82 -0.36 -1.36 16 32 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 33 H 0.11 -0.34 8.08 -51.93 -0.42 -0.76 16 34 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 35 H 0.13 -0.08 4.88 -52.49 -0.26 -0.34 16 36 H 0.12 0.01 7.96 -51.93 -0.41 -0.41 16 37 H 0.38 0.06 8.70 45.56 0.40 0.46 16 38 H -0.26 -0.62 7.11 56.52 0.40 -0.21 16 39 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 40 H 0.13 0.18 8.06 -52.48 -0.42 -0.24 16 41 H 0.12 0.05 8.06 -52.49 -0.42 -0.38 16 42 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 43 H 0.10 0.15 8.14 -51.93 -0.42 -0.27 16 LS Contribution 357.88 15.07 5.39 5.39 Total: 0.00 -9.03 357.88 -8.64 -17.66 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -5.59 Total: -9.96 kcal Atomic # 6 Polarization: -0.04 SS G_CDS: -1.91 Total: -1.95 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -0.24 Total: -0.04 kcal Atomic # 8 Polarization: -4.90 SS G_CDS: -1.22 Total: -6.12 kcal Atomic # 14 Polarization: 0.08 SS G_CDS: -5.06 Total: -4.99 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -9.03 -8.64 -17.66 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_12335836.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.067 kcal (2) G-P(sol) polarization free energy of solvation -9.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.663 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds