Wall clock time and date at job start Sun Mar 7 2021 09:03:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35654 * 116.99883 * 2 1 4 4 C 1.40138 * 120.14967 * 180.02562 * 3 2 1 5 5 C 1.47525 * 120.19279 * 359.95440 * 4 3 2 6 6 O 1.21590 * 120.00064 * 359.97438 * 5 4 3 7 7 N 1.34778 * 120.00097 * 180.02562 * 5 4 3 8 8 C 1.46494 * 120.00132 * 174.96505 * 7 5 4 9 9 C 1.52999 * 112.85387 * 293.70779 * 8 7 5 10 10 O 1.42903 * 109.46705 * 305.09645 * 9 8 7 11 11 C 1.53783 * 113.61462 * 64.90393 * 8 7 5 12 12 C 1.53785 * 87.08253 * 139.98009 * 11 8 7 13 13 H 1.09006 * 113.60840 * 89.11618 * 12 11 8 14 14 O 1.42901 * 113.61350 * 220.01721 * 12 11 8 15 15 C 1.42902 * 113.99674 * 209.99869 * 14 12 11 16 16 C 1.53781 * 87.07956 * 334.56770 * 12 11 8 17 17 C 1.39711 * 119.61511 * 180.23216 * 4 3 2 18 18 C 1.37794 * 119.90485 * 359.48545 * 17 4 3 19 19 C 1.50700 * 119.84765 * 180.27663 * 18 17 4 20 20 O 1.42901 * 109.47124 * 65.21455 * 19 18 17 21 21 Si 1.86297 * 109.47212 * 185.21539 * 19 18 17 22 22 C 1.38544 * 120.30181 * 0.49872 * 18 17 4 23 23 C 1.38059 * 120.39217 * 359.77709 * 22 18 17 24 24 H 1.09008 * 109.47178 * 180.02562 * 1 2 3 25 25 H 1.09008 * 109.47374 * 299.99772 * 1 2 3 26 26 H 1.08994 * 109.47209 * 59.99972 * 1 2 3 27 27 H 0.96997 * 120.00134 * 354.68874 * 7 5 4 28 28 H 1.09000 * 109.47222 * 65.09080 * 9 8 7 29 29 H 1.08991 * 109.47465 * 185.09452 * 9 8 7 30 30 H 0.96704 * 113.99729 * 179.97438 * 10 9 8 31 31 H 1.09003 * 113.61214 * 254.52808 * 11 8 7 32 32 H 1.08997 * 113.61689 * 25.34964 * 11 8 7 33 33 H 1.09004 * 109.46334 * 179.97438 * 15 14 12 34 34 H 1.08997 * 109.47301 * 300.00065 * 15 14 12 35 35 H 1.08997 * 109.46862 * 60.00557 * 15 14 12 36 36 H 1.08998 * 113.61139 * 270.88394 * 16 12 11 37 37 H 1.08998 * 113.61018 * 139.98093 * 16 12 11 38 38 H 1.08001 * 120.04822 * 179.72871 * 17 4 3 39 39 H 1.09006 * 109.47144 * 305.22052 * 19 18 17 40 40 H 0.96705 * 113.99703 * 59.99785 * 20 19 18 41 41 H 1.48498 * 110.00012 * 180.02562 * 21 19 18 42 42 H 1.48498 * 110.00041 * 301.31999 * 21 19 18 43 43 H 1.07996 * 119.80408 * 179.76399 * 22 18 17 44 44 H 1.07992 * 119.95714 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2550 0.0533 -0.0001 6 8 3.7095 -1.0334 0.0012 7 7 5.6005 0.1319 -0.0001 8 6 6.4054 -1.0870 0.1117 9 6 6.2516 -1.7783 1.4679 10 8 6.5501 -0.8498 2.5123 11 6 6.2511 -2.0391 -1.0861 12 6 7.7653 -2.2873 -0.9833 13 1 8.0289 -3.1082 -0.3164 14 8 8.4194 -2.3687 -2.2513 15 6 9.5694 -3.2169 -2.2586 16 6 7.8682 -0.9014 -0.3249 17 6 4.0667 2.5364 0.0044 18 6 3.3036 3.6837 -0.0010 19 6 3.9765 5.0321 -0.0020 20 8 4.6988 5.2032 -1.2231 21 14 2.6883 6.3693 0.1501 22 6 1.9205 3.6033 -0.0009 23 6 1.2923 2.3739 0.0000 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8901 26 1 -0.3633 0.5138 -0.8899 27 1 6.0359 0.9951 -0.0781 28 1 5.2276 -2.1345 1.5801 29 1 6.9384 -2.6227 1.5252 30 1 6.4725 -1.2204 3.4021 31 1 5.6484 -2.9208 -0.8681 32 1 5.9509 -1.5381 -2.0063 33 1 10.0081 -3.2254 -3.2564 34 1 10.3012 -2.8430 -1.5426 35 1 9.2756 -4.2296 -1.9826 36 1 8.0115 -0.0891 -1.0374 37 1 8.5710 -0.8646 0.5075 38 1 5.1446 2.6039 0.0084 39 1 4.6663 5.0946 0.8398 40 1 4.1468 5.1591 -2.0160 41 1 3.3391 7.7040 0.1497 42 1 1.7232 6.2750 -0.9746 43 1 1.3302 4.5077 -0.0012 44 1 0.2138 2.3194 0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_12496546.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:28 Heat of formation + Delta-G solvation = -130.148172 kcal Electronic energy + Delta-G solvation = -28577.663638 eV Core-core repulsion = 24463.780983 eV Total energy + Delta-G solvation = -4113.882655 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.02537 -41.22686 -39.49906 -39.22084 -37.96828 -37.22882 -36.66477 -34.42847 -32.41669 -31.82426 -28.78078 -28.42927 -27.30564 -26.87456 -26.16830 -25.57461 -23.86205 -22.51318 -21.36431 -20.20122 -19.47157 -18.58920 -18.47505 -18.14046 -17.97556 -17.18131 -16.86538 -16.75777 -16.33877 -16.18675 -16.08345 -15.87845 -15.84833 -15.80203 -15.23883 -15.01482 -14.67321 -14.53444 -14.40927 -13.71097 -13.59166 -13.51885 -13.44332 -13.16080 -13.03600 -12.69165 -12.47464 -12.41420 -12.21744 -12.04591 -11.90861 -11.75452 -11.65782 -11.21995 -10.78635 -10.53373 -10.50473 -10.27052 -10.04670 -9.30517 -4.89763 -0.26252 0.20858 1.32868 1.60997 1.78141 1.98308 2.02554 2.26196 2.67336 2.85107 2.97098 3.25061 3.41357 3.52985 3.57713 3.63998 3.66909 3.72960 3.94386 3.99114 4.11524 4.20237 4.30507 4.34316 4.35710 4.40407 4.46014 4.53779 4.55268 4.61542 4.63139 4.65331 4.67883 4.73444 4.83435 4.89156 4.89505 4.93904 5.01884 5.10131 5.27127 5.48155 5.56055 6.21925 6.29833 6.50882 6.51835 6.77340 7.22478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.312 6.312 3 C 0.173 3.827 4 C -0.197 4.197 5 C 0.560 3.440 6 O -0.554 6.554 7 N -0.700 5.700 8 C 0.154 3.846 9 C 0.088 3.912 10 O -0.578 6.578 11 C -0.129 4.129 12 C 0.067 3.933 13 H 0.112 0.888 14 O -0.398 6.398 15 C 0.022 3.978 16 C -0.139 4.139 17 C -0.018 4.018 18 C -0.164 4.164 19 C -0.077 4.077 20 O -0.548 6.548 21 Si 0.766 3.234 22 C -0.044 4.044 23 C -0.212 4.212 24 H 0.108 0.892 25 H 0.075 0.925 26 H 0.071 0.929 27 H 0.408 0.592 28 H 0.042 0.958 29 H 0.078 0.922 30 H 0.397 0.603 31 H 0.075 0.925 32 H 0.080 0.920 33 H 0.092 0.908 34 H 0.054 0.946 35 H 0.052 0.948 36 H 0.096 0.904 37 H 0.094 0.906 38 H 0.144 0.856 39 H 0.128 0.872 40 H 0.386 0.614 41 H -0.305 1.305 42 H -0.277 1.277 43 H 0.157 0.843 44 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.003 1.101 3.412 3.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.223 6.223 3 C 0.124 3.876 4 C -0.201 4.201 5 C 0.349 3.651 6 O -0.433 6.433 7 N -0.352 5.352 8 C 0.067 3.933 9 C 0.009 3.991 10 O -0.386 6.386 11 C -0.168 4.168 12 C 0.009 3.991 13 H 0.129 0.871 14 O -0.317 6.317 15 C -0.074 4.074 16 C -0.177 4.177 17 C -0.037 4.037 18 C -0.165 4.165 19 C -0.185 4.185 20 O -0.356 6.356 21 Si 0.671 3.329 22 C -0.062 4.062 23 C -0.231 4.231 24 H 0.126 0.874 25 H 0.093 0.907 26 H 0.089 0.911 27 H 0.246 0.754 28 H 0.060 0.940 29 H 0.096 0.904 30 H 0.247 0.753 31 H 0.093 0.907 32 H 0.098 0.902 33 H 0.110 0.890 34 H 0.073 0.927 35 H 0.071 0.929 36 H 0.115 0.885 37 H 0.113 0.887 38 H 0.162 0.838 39 H 0.145 0.855 40 H 0.235 0.765 41 H -0.233 1.233 42 H -0.204 1.204 43 H 0.174 0.826 44 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -1.135 1.335 2.812 3.313 hybrid contribution 0.213 -0.469 -0.664 0.841 sum -0.922 0.865 2.148 2.493 Atomic orbital electron populations 1.23446 0.76549 1.05470 1.02820 1.86332 1.23159 1.26284 1.86553 1.19376 0.91184 0.85602 0.91401 1.19451 0.91282 0.94061 1.15270 1.18236 0.82331 0.88754 0.75782 1.90777 1.72286 1.29847 1.50396 1.45619 1.05026 1.10031 1.74549 1.21421 0.92081 0.86171 0.93628 1.22157 0.99864 0.91208 0.85833 1.86397 1.92661 1.41028 1.18521 1.23462 0.95989 0.99705 0.97604 1.23666 0.92087 0.97531 0.85850 0.87072 1.87930 1.43615 1.68504 1.31656 1.22996 0.87213 0.93516 1.03653 1.23714 0.94025 0.98954 1.01026 1.21101 1.00503 0.89467 0.92591 1.20167 0.93848 0.95797 1.06686 1.25174 1.04678 0.98908 0.89787 1.86584 1.38497 1.94270 1.16229 0.94117 0.76688 0.73850 0.88203 1.21306 0.93747 0.98034 0.93115 1.21473 1.01756 0.90876 1.08956 0.87403 0.90680 0.91072 0.75449 0.94005 0.90368 0.75312 0.90669 0.90153 0.88978 0.92747 0.92937 0.88511 0.88705 0.83834 0.85460 0.76478 1.23309 1.20391 0.82575 0.81939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.31 -2.83 8.57 -68.77 -0.59 -3.42 16 3 C 0.17 1.11 6.70 22.84 0.15 1.27 16 4 C -0.20 -1.41 5.89 -20.01 -0.12 -1.53 16 5 C 0.56 5.99 7.42 86.69 0.64 6.63 16 6 O -0.55 -9.55 13.57 16.92 0.23 -9.32 16 7 N -0.70 -3.79 5.07 -423.67 -2.15 -5.93 16 8 C 0.15 0.63 0.85 4.13 0.00 0.63 16 9 C 0.09 0.25 6.20 71.98 0.45 0.70 16 10 O -0.58 -1.30 13.53 -148.98 -2.02 -3.31 16 11 C -0.13 -0.76 6.40 31.12 0.20 -0.56 16 12 C 0.07 0.12 3.96 31.12 0.12 0.25 16 13 H 0.11 -0.27 7.34 -2.38 -0.02 -0.29 16 14 O -0.40 -2.07 10.71 -148.98 -1.60 -3.66 16 15 C 0.02 -0.02 10.85 113.37 1.23 1.21 16 16 C -0.14 -0.13 7.22 31.12 0.22 0.10 16 17 C -0.02 -0.03 9.16 22.52 0.21 0.17 16 18 C -0.16 0.17 5.35 -19.90 -0.11 0.07 16 19 C -0.08 0.20 2.79 71.24 0.20 0.40 16 20 O -0.55 -0.36 12.83 -148.98 -1.91 -2.27 16 21 Si 0.77 -3.13 29.87 68.60 2.05 -1.08 16 22 C -0.04 0.12 8.65 22.30 0.19 0.31 16 23 C -0.21 0.07 9.03 22.34 0.20 0.27 16 24 H 0.11 -0.25 8.14 -2.38 -0.02 -0.27 16 25 H 0.07 -0.35 7.66 -2.38 -0.02 -0.37 16 26 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 27 H 0.41 0.59 6.75 -92.71 -0.63 -0.04 16 28 H 0.04 0.32 7.20 -2.39 -0.02 0.30 16 29 H 0.08 -0.17 7.31 -2.39 -0.02 -0.18 16 30 H 0.40 -2.23 9.12 -74.05 -0.68 -2.90 16 31 H 0.07 0.54 8.10 -2.39 -0.02 0.52 16 32 H 0.08 0.76 8.14 -2.39 -0.02 0.74 16 33 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.05 -0.18 8.14 -2.39 -0.02 -0.19 16 35 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.10 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.09 -0.10 8.10 -2.39 -0.02 -0.12 16 38 H 0.14 -0.14 6.42 -2.91 -0.02 -0.16 16 39 H 0.13 -0.55 7.96 -2.38 -0.02 -0.57 16 40 H 0.39 -1.76 8.70 -74.05 -0.64 -2.40 16 41 H -0.30 -1.31 7.11 99.48 0.71 -0.60 16 42 H -0.28 0.30 7.00 99.48 0.70 1.00 16 43 H 0.16 -1.20 4.81 -2.91 -0.01 -1.21 16 44 H 0.16 -0.93 6.30 -2.91 -0.02 -0.95 16 Total: 0.00 -24.11 360.83 -2.13 -26.24 By element: Atomic # 1 Polarization: -7.42 SS G_CDS: -0.86 Total: -8.27 kcal Atomic # 6 Polarization: 6.31 SS G_CDS: 4.71 Total: 11.02 kcal Atomic # 7 Polarization: -3.79 SS G_CDS: -2.15 Total: -5.93 kcal Atomic # 8 Polarization: -16.09 SS G_CDS: -5.88 Total: -21.97 kcal Atomic # 14 Polarization: -3.13 SS G_CDS: 2.05 Total: -1.08 kcal Total: -24.11 -2.13 -26.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_12496546.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.908 kcal (2) G-P(sol) polarization free energy of solvation -24.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.148 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds