Wall clock time and date at job start Sun Mar 7 2021 09:03:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42894 * 113.99906 * 2 1 4 4 H 1.08999 * 112.85155 * 18.80825 * 3 2 1 5 5 C 1.53780 * 113.61609 * 150.00214 * 3 2 1 6 6 C 1.53777 * 87.08225 * 89.19746 * 5 3 2 7 7 C 1.53006 * 113.61234 * 140.06473 * 6 5 3 8 8 O 1.42899 * 109.47021 * 186.55244 * 7 6 5 9 9 N 1.46491 * 113.61742 * 270.88650 * 6 5 3 10 10 C 1.34783 * 120.00293 * 294.76871 * 9 6 5 11 11 O 1.21579 * 119.99733 * 5.03682 * 10 9 6 12 12 C 1.47664 * 120.00031 * 185.03646 * 10 9 6 13 13 C 1.39998 * 120.45310 * 353.90218 * 12 10 9 14 14 N 1.31316 * 121.37412 * 179.97438 * 13 12 10 15 15 C 1.32822 * 121.88483 * 0.02562 * 14 13 12 16 16 N 1.37155 * 132.95659 * 179.97438 * 15 14 13 17 17 C 1.36945 * 110.11402 * 179.97438 * 16 15 14 18 18 C 1.34178 * 109.95044 * 0.02562 * 17 16 15 19 19 C 1.50705 * 126.59873 * 179.97438 * 18 17 16 20 20 O 1.42900 * 109.46691 * 105.02600 * 19 18 17 21 21 Si 1.86294 * 109.47148 * 345.03106 * 19 18 17 22 22 C 1.41016 * 120.09089 * 0.25903 * 15 14 13 23 23 C 1.39285 * 119.61405 * 359.47569 * 22 15 14 24 24 C 1.50702 * 121.03125 * 180.25095 * 23 22 15 25 25 C 1.53784 * 87.08114 * 25.43683 * 6 5 3 26 26 H 1.08996 * 109.47075 * 179.97438 * 1 2 3 27 27 H 1.09004 * 109.47009 * 299.99933 * 1 2 3 28 28 H 1.09003 * 109.47139 * 59.99547 * 1 2 3 29 29 H 1.09006 * 113.60846 * 334.64830 * 5 3 2 30 30 H 1.08996 * 113.61936 * 203.75191 * 5 3 2 31 31 H 1.08995 * 109.47324 * 306.56000 * 7 6 5 32 32 H 1.09001 * 109.46580 * 66.55545 * 7 6 5 33 33 H 0.96697 * 113.99472 * 179.97438 * 8 7 6 34 34 H 0.97002 * 120.00271 * 114.76656 * 9 6 5 35 35 H 1.08001 * 119.31810 * 359.97438 * 13 12 10 36 36 H 0.97002 * 124.94250 * 0.02562 * 16 15 14 37 37 H 1.08000 * 125.02843 * 179.97438 * 17 16 15 38 38 H 1.08995 * 109.47611 * 225.02769 * 19 18 17 39 39 H 0.96692 * 114.00440 * 300.00456 * 20 19 18 40 40 H 1.48503 * 110.00443 * 58.67620 * 21 19 18 41 41 H 1.48502 * 110.00166 * 179.97438 * 21 19 18 42 42 H 1.09003 * 109.47222 * 263.86739 * 24 23 22 43 43 H 1.09007 * 109.46853 * 23.86610 * 24 23 22 44 44 H 1.08998 * 109.47038 * 143.85936 * 24 23 22 45 45 H 1.09007 * 113.61378 * 89.10986 * 25 6 5 46 46 H 1.08997 * 113.61603 * 220.01601 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 0.3238 5 6 3.3756 1.3719 0.7045 6 6 4.0063 1.0352 -0.6570 7 6 5.2916 1.8132 -0.9462 8 8 5.7169 1.5498 -2.2848 9 7 4.1447 -0.4027 -0.9001 10 6 4.9730 -1.1393 -0.1332 11 8 5.5349 -0.6302 0.8172 12 6 5.1979 -2.5645 -0.4473 13 6 4.4615 -3.1930 -1.4585 14 7 4.6470 -4.4592 -1.7532 15 6 5.5378 -5.2058 -1.1104 16 7 5.9126 -6.5202 -1.2252 17 6 6.8929 -6.8116 -0.3145 18 6 7.1839 -5.7204 0.4100 19 6 8.2045 -5.6209 1.5144 20 8 9.3539 -4.9177 1.0386 21 14 8.7035 -7.3325 2.0548 22 6 6.3141 -4.6459 -0.0748 23 6 6.1485 -3.3044 0.2612 24 6 6.9651 -2.6718 1.3586 25 6 2.7531 1.6511 -1.3014 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 3.5175 0.5948 1.4556 30 1 3.6305 2.3667 1.0698 31 1 5.1049 2.8805 -0.8275 32 1 6.0698 1.5009 -0.2497 33 1 6.5279 2.0117 -2.5378 34 1 3.6403 -0.8249 -1.6131 35 1 3.7254 -2.6248 -2.0078 36 1 5.5383 -7.1512 -1.8598 37 1 7.3619 -7.7773 -0.1962 38 1 7.7741 -5.0840 2.3596 39 1 9.7890 -5.3393 0.2851 40 1 9.2626 -8.0859 0.9037 41 1 9.7102 -7.2482 3.1432 42 1 6.3954 -2.6828 2.2878 43 1 7.8900 -3.2330 1.4927 44 1 7.2006 -1.6424 1.0888 45 1 2.8379 2.7223 -1.4844 46 1 2.3926 1.0995 -2.1696 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_12890568.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:47 Heat of formation + Delta-G solvation = -42.871811 kcal Electronic energy + Delta-G solvation = -31977.357228 eV Core-core repulsion = 27643.099630 eV Total energy + Delta-G solvation = -4334.257598 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.156 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.75314 -41.67069 -39.91089 -38.54570 -37.91108 -37.66583 -36.50664 -34.88825 -34.00487 -31.85366 -30.82154 -28.94683 -28.54107 -27.35023 -26.81944 -26.44086 -24.75038 -23.96594 -23.17525 -21.71027 -20.65002 -20.22027 -19.09968 -18.69824 -18.18100 -17.73183 -17.55061 -17.41729 -16.79218 -16.61849 -16.53210 -16.27194 -16.05252 -15.83759 -15.66317 -15.41796 -15.17350 -14.83693 -14.61611 -14.58940 -14.00901 -13.80929 -13.65800 -13.61667 -13.47002 -13.30086 -13.19117 -13.06381 -12.86427 -12.68850 -12.38729 -12.13875 -11.90608 -11.80261 -11.45732 -11.03907 -10.94928 -10.82550 -10.53062 -10.36588 -10.05303 -9.81999 -9.45833 -9.05239 -4.97144 -0.10134 0.06678 1.27387 1.45648 1.54069 1.69364 1.96249 2.10216 2.19358 2.69397 2.99220 3.07466 3.39806 3.43692 3.50415 3.58950 3.61942 3.66941 3.78477 3.86813 3.96443 4.10311 4.18336 4.30424 4.35631 4.38115 4.44195 4.45138 4.49015 4.61413 4.62848 4.68527 4.72202 4.78400 4.81242 4.83999 4.88944 5.05824 5.08038 5.13964 5.18641 5.29664 5.52226 5.60256 5.77126 5.88966 6.18375 6.24844 6.48452 6.70566 6.73030 6.97269 7.46093 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.363 6.363 3 C 0.062 3.938 4 H 0.079 0.921 5 C -0.137 4.137 6 C 0.167 3.833 7 C 0.074 3.926 8 O -0.568 6.568 9 N -0.688 5.688 10 C 0.580 3.420 11 O -0.534 6.534 12 C -0.227 4.227 13 C 0.184 3.816 14 N -0.505 5.505 15 C 0.307 3.693 16 N -0.571 5.571 17 C 0.066 3.934 18 C -0.177 4.177 19 C -0.044 4.044 20 O -0.527 6.527 21 Si 0.686 3.314 22 C -0.149 4.149 23 C 0.083 3.917 24 C -0.131 4.131 25 C -0.152 4.152 26 H 0.087 0.913 27 H 0.043 0.957 28 H 0.042 0.958 29 H 0.092 0.908 30 H 0.103 0.897 31 H 0.055 0.945 32 H 0.060 0.940 33 H 0.379 0.621 34 H 0.402 0.598 35 H 0.162 0.838 36 H 0.425 0.575 37 H 0.183 0.817 38 H 0.118 0.882 39 H 0.374 0.626 40 H -0.258 1.258 41 H -0.254 1.254 42 H 0.081 0.919 43 H 0.081 0.919 44 H 0.097 0.903 45 H 0.105 0.895 46 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.713 -0.862 -0.761 2.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.282 6.282 3 C 0.003 3.997 4 H 0.097 0.903 5 C -0.176 4.176 6 C 0.079 3.921 7 C -0.005 4.005 8 O -0.373 6.373 9 N -0.339 5.339 10 C 0.368 3.632 11 O -0.412 6.412 12 C -0.235 4.235 13 C 0.015 3.985 14 N -0.218 5.218 15 C 0.073 3.927 16 N -0.176 5.176 17 C -0.061 4.061 18 C -0.185 4.185 19 C -0.154 4.154 20 O -0.333 6.333 21 Si 0.586 3.414 22 C -0.156 4.156 23 C 0.075 3.925 24 C -0.187 4.187 25 C -0.190 4.190 26 H 0.106 0.894 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.111 0.889 30 H 0.121 0.879 31 H 0.073 0.927 32 H 0.079 0.921 33 H 0.226 0.774 34 H 0.238 0.762 35 H 0.178 0.822 36 H 0.263 0.737 37 H 0.199 0.801 38 H 0.136 0.864 39 H 0.222 0.778 40 H -0.183 1.183 41 H -0.179 1.179 42 H 0.099 0.901 43 H 0.100 0.900 44 H 0.115 0.885 45 H 0.123 0.877 46 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -2.717 -1.784 -0.239 3.260 hybrid contribution 0.802 0.867 -1.130 1.635 sum -1.916 -0.917 -1.369 2.527 Atomic orbital electron populations 1.22845 0.80719 1.03019 1.00107 1.87921 1.19727 1.26034 1.94472 1.23089 0.94684 0.85704 0.96208 0.90287 1.23529 0.93413 1.03643 0.96988 1.21088 0.93197 0.80968 0.96801 1.22473 0.96280 0.97507 0.84234 1.86464 1.47175 1.73770 1.29855 1.45234 1.45389 1.07129 1.36171 1.17745 0.78470 0.85109 0.81915 1.90715 1.49012 1.73046 1.28419 1.20447 1.04173 0.95426 1.03409 1.22521 0.95202 0.88494 0.92278 1.66450 1.19247 1.06691 1.29450 1.18508 0.94242 0.86018 0.93890 1.41496 1.34246 1.08430 1.33457 1.21770 0.92679 0.99775 0.91843 1.20598 1.02699 0.92293 1.02899 1.24406 0.85402 1.08980 0.96609 1.86614 1.42229 1.51794 1.52695 0.95122 0.88041 0.76482 0.81729 1.19454 1.01456 0.94049 1.00641 1.19901 0.90310 0.90004 0.92297 1.21245 0.99070 1.02800 0.95574 1.23771 0.94718 1.02022 0.98455 0.89436 0.93856 0.93886 0.88905 0.87919 0.92705 0.92150 0.77433 0.76220 0.82152 0.73689 0.80063 0.86377 0.77809 1.18290 1.17872 0.90060 0.90046 0.88459 0.87710 0.89913 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.36 -0.46 10.14 -35.23 -0.36 -0.82 16 3 C 0.06 -0.01 4.37 -25.92 -0.11 -0.12 16 4 H 0.08 -0.12 7.87 -51.93 -0.41 -0.53 16 5 C -0.14 -0.10 6.78 -25.92 -0.18 -0.28 16 6 C 0.17 0.17 0.75 -131.01 -0.10 0.07 16 7 C 0.07 0.07 6.27 37.16 0.23 0.30 16 8 O -0.57 -0.78 13.54 -35.23 -0.48 -1.26 16 9 N -0.69 -1.29 4.49 -47.84 -0.22 -1.50 16 10 C 0.58 2.28 7.27 -12.41 -0.09 2.19 16 11 O -0.53 -3.12 11.39 5.30 0.06 -3.06 16 12 C -0.23 -0.85 5.89 -104.82 -0.62 -1.47 16 13 C 0.18 0.50 10.68 -17.11 -0.18 0.32 16 14 N -0.51 -1.93 10.37 -11.96 -0.12 -2.06 16 15 C 0.31 0.98 8.42 -155.71 -1.31 -0.33 16 16 N -0.57 0.06 6.04 -12.12 -0.07 -0.01 16 17 C 0.07 -0.08 10.44 -16.70 -0.17 -0.25 16 18 C -0.18 -0.14 5.57 -102.73 -0.57 -0.71 16 19 C -0.04 0.00 1.88 36.01 0.07 0.07 16 20 O -0.53 -0.68 11.67 -35.23 -0.41 -1.09 16 21 Si 0.69 -1.20 30.83 -169.99 -5.24 -6.44 16 22 C -0.15 -0.50 6.16 -105.13 -0.65 -1.15 16 23 C 0.08 0.34 5.98 -103.67 -0.62 -0.28 16 24 C -0.13 -0.49 8.46 36.01 0.30 -0.18 16 25 C -0.15 0.10 7.21 -25.92 -0.19 -0.08 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.09 0.31 7.19 -51.93 -0.37 -0.06 16 30 H 0.10 -0.11 8.10 -51.93 -0.42 -0.53 16 31 H 0.05 -0.06 8.09 -51.93 -0.42 -0.48 16 32 H 0.06 0.16 7.17 -51.93 -0.37 -0.22 16 33 H 0.38 -0.85 9.12 45.56 0.42 -0.44 16 34 H 0.40 0.23 6.73 -40.82 -0.27 -0.05 16 35 H 0.16 -0.01 6.41 -52.49 -0.34 -0.35 16 36 H 0.42 -1.13 8.96 -40.82 -0.37 -1.49 16 37 H 0.18 -0.80 6.28 -52.49 -0.33 -1.13 16 38 H 0.12 0.00 7.13 -51.93 -0.37 -0.37 16 39 H 0.37 -0.59 8.70 45.56 0.40 -0.19 16 40 H -0.26 0.18 7.00 56.52 0.40 0.58 16 41 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 42 H 0.08 0.28 8.14 -51.93 -0.42 -0.14 16 43 H 0.08 0.28 4.78 -51.93 -0.25 0.03 16 44 H 0.10 0.50 5.96 -51.93 -0.31 0.19 16 45 H 0.10 -0.21 8.06 -51.93 -0.42 -0.63 16 46 H 0.08 -0.03 8.09 -51.93 -0.42 -0.45 16 LS Contribution 370.75 15.07 5.59 5.59 Total: 0.00 -9.88 370.75 -9.49 -19.37 By element: Atomic # 1 Polarization: -2.73 SS G_CDS: -5.15 Total: -7.88 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -3.09 Total: -0.84 kcal Atomic # 7 Polarization: -3.16 SS G_CDS: -0.41 Total: -3.57 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -1.18 Total: -6.23 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.24 Total: -6.44 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -9.88 -9.49 -19.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_12890568.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.501 kcal (2) G-P(sol) polarization free energy of solvation -9.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.371 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.872 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds