Wall clock time and date at job start Sun Mar 7 2021 09:04:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42901 * 114.00061 * 2 1 4 4 H 1.09001 * 112.90469 * 341.24401 * 3 2 1 5 5 C 1.53780 * 113.61809 * 112.49804 * 3 2 1 6 6 C 1.53782 * 87.07973 * 139.98179 * 5 3 2 7 7 C 1.52996 * 113.61455 * 89.12046 * 6 5 3 8 8 O 1.42900 * 109.47591 * 86.40347 * 7 6 5 9 9 N 1.46503 * 113.69042 * 220.00719 * 6 5 3 10 10 C 1.34771 * 119.99970 * 163.25075 * 9 6 5 11 11 O 1.21513 * 119.99911 * 4.97610 * 10 9 6 12 12 C 1.48167 * 120.00052 * 184.97428 * 10 9 6 13 13 N 1.32720 * 119.72497 * 359.72535 * 12 10 9 14 14 C 1.31518 * 121.64644 * 179.75208 * 13 12 10 15 15 C 1.38563 * 120.89975 * 0.52586 * 14 13 12 16 16 C 1.50704 * 120.32290 * 179.71692 * 15 14 13 17 17 O 1.42908 * 109.46684 * 120.02563 * 16 15 14 18 18 Si 1.86306 * 109.47003 * 0.02846 * 16 15 14 19 19 C 1.38625 * 119.35325 * 359.74752 * 15 14 13 20 20 C 1.38586 * 118.48908 * 359.97438 * 19 15 14 21 21 C 1.53775 * 87.08331 * 334.56858 * 6 5 3 22 22 H 1.08996 * 109.47117 * 60.00637 * 1 2 3 23 23 H 1.09003 * 109.46643 * 180.02562 * 1 2 3 24 24 H 1.08992 * 109.47208 * 300.00119 * 1 2 3 25 25 H 1.08999 * 113.61374 * 25.43341 * 5 3 2 26 26 H 1.08997 * 113.61952 * 254.53251 * 5 3 2 27 27 H 1.09002 * 109.46878 * 326.40346 * 7 6 5 28 28 H 1.09000 * 109.47227 * 206.40978 * 7 6 5 29 29 H 0.96693 * 114.00311 * 180.02562 * 8 7 6 30 30 H 0.97006 * 119.99646 * 343.25691 * 9 6 5 31 31 H 1.07999 * 119.55272 * 180.27136 * 14 13 12 32 32 H 1.08992 * 109.47588 * 240.02705 * 16 15 14 33 33 H 0.96698 * 113.99613 * 299.99968 * 17 16 15 34 34 H 1.48498 * 109.99780 * 179.97438 * 18 16 15 35 35 H 1.48500 * 109.99715 * 301.31578 * 18 16 15 36 36 H 1.08000 * 120.75566 * 180.02562 * 19 15 14 37 37 H 1.08000 * 120.47072 * 179.97438 * 20 19 15 38 38 H 1.08999 * 113.61641 * 139.98258 * 21 6 5 39 39 H 1.09002 * 113.61571 * 270.88740 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3143 2.0797 -0.3228 5 6 2.7534 1.6490 1.3018 6 6 3.8227 2.3182 0.4222 7 6 3.5413 3.7937 0.1312 8 8 4.0707 4.5971 1.1877 9 7 5.1941 2.0800 0.8790 10 6 6.2302 2.3050 0.0470 11 8 6.0344 2.7905 -1.0496 12 6 7.6079 1.9605 0.4694 13 7 7.8161 1.4356 1.6705 14 6 9.0224 1.1112 2.0822 15 6 10.1293 1.3174 1.2746 16 6 11.5063 0.9468 1.7620 17 8 12.0764 -0.0261 0.8840 18 14 11.3868 0.2379 3.4807 19 6 9.9577 1.8685 0.0142 20 6 8.6746 2.1951 -0.3953 21 6 3.3756 1.3719 -0.7045 22 1 -0.3633 0.5137 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8899 25 1 3.1166 0.7742 1.8411 26 1 2.2140 2.3478 1.9411 27 1 2.4651 3.9510 0.0594 28 1 4.0131 4.0747 -0.8104 29 1 3.9280 5.5461 1.0695 30 1 5.3564 1.7603 1.7804 31 1 9.1524 0.6822 3.0647 32 1 12.1373 1.8353 1.7785 33 1 11.5663 -0.8450 0.8201 34 1 12.7383 -0.1322 3.9725 35 1 10.7662 1.2284 4.3966 36 1 10.8045 2.0386 -0.6341 37 1 8.5043 2.6266 -1.3707 38 1 3.3385 1.8470 -1.6848 39 1 3.9088 0.4213 -0.7136 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_13287726.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:08 Heat of formation + Delta-G solvation = -82.153565 kcal Electronic energy + Delta-G solvation = -23914.801946 eV Core-core repulsion = 20211.794393 eV Total energy + Delta-G solvation = -3703.007553 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.99987 -41.27615 -39.52251 -38.05120 -37.81186 -36.65366 -34.46099 -33.41025 -32.89744 -28.87140 -27.71770 -27.28555 -26.85256 -25.02931 -24.58862 -23.30582 -21.68548 -20.08231 -19.20417 -18.67425 -18.53539 -17.94265 -17.54002 -16.83165 -16.71267 -16.46549 -16.26768 -16.05831 -15.94365 -15.83535 -15.43147 -15.17509 -14.79848 -14.40302 -14.30795 -14.19928 -13.66724 -13.53133 -13.45042 -13.07607 -12.69285 -12.62601 -12.48957 -12.14190 -11.90671 -11.75295 -11.36250 -11.05298 -10.87568 -10.66910 -10.53665 -10.47988 -10.25324 -9.97961 -5.16248 -0.52371 0.09284 1.11537 1.50369 1.71857 1.86152 1.99664 2.74430 2.81261 2.97316 3.03280 3.25334 3.27167 3.45342 3.53730 3.65402 3.69858 3.76754 3.92257 3.96375 4.12475 4.20850 4.31877 4.33042 4.39043 4.42532 4.55602 4.61263 4.64448 4.72694 4.75105 4.85584 4.92767 4.95776 4.98927 5.02393 5.38819 5.53879 6.19178 6.38259 6.42518 6.63240 6.70753 7.24382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.150 4.150 6 C 0.156 3.844 7 C 0.084 3.916 8 O -0.565 6.565 9 N -0.684 5.684 10 C 0.578 3.422 11 O -0.530 6.530 12 C 0.083 3.917 13 N -0.452 5.452 14 C 0.103 3.897 15 C -0.152 4.152 16 C -0.066 4.066 17 O -0.536 6.536 18 Si 0.688 3.312 19 C -0.054 4.054 20 C -0.109 4.109 21 C -0.130 4.130 22 H 0.043 0.957 23 H 0.088 0.912 24 H 0.043 0.957 25 H 0.102 0.898 26 H 0.083 0.917 27 H 0.055 0.945 28 H 0.066 0.934 29 H 0.381 0.619 30 H 0.414 0.586 31 H 0.164 0.836 32 H 0.120 0.880 33 H 0.381 0.619 34 H -0.249 1.249 35 H -0.252 1.252 36 H 0.147 0.853 37 H 0.152 0.848 38 H 0.084 0.916 39 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.358 -1.143 1.240 2.899 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.188 4.188 6 C 0.069 3.931 7 C 0.005 3.995 8 O -0.370 6.370 9 N -0.335 5.335 10 C 0.363 3.637 11 O -0.405 6.405 12 C -0.055 4.055 13 N -0.163 5.163 14 C -0.057 4.057 15 C -0.154 4.154 16 C -0.178 4.178 17 O -0.342 6.342 18 Si 0.589 3.411 19 C -0.079 4.079 20 C -0.129 4.129 21 C -0.168 4.168 22 H 0.062 0.938 23 H 0.106 0.894 24 H 0.062 0.938 25 H 0.120 0.880 26 H 0.102 0.898 27 H 0.073 0.927 28 H 0.085 0.915 29 H 0.229 0.771 30 H 0.251 0.749 31 H 0.180 0.820 32 H 0.138 0.862 33 H 0.229 0.771 34 H -0.174 1.174 35 H -0.177 1.177 36 H 0.165 0.835 37 H 0.170 0.830 38 H 0.103 0.897 39 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -2.302 -1.141 1.984 3.246 hybrid contribution 0.516 1.321 -0.682 1.574 sum -1.786 0.181 1.302 2.218 Atomic orbital electron populations 1.22843 0.80736 1.03155 1.00123 1.87964 1.19998 1.26622 1.94500 1.23559 0.93888 0.85911 0.96156 0.88935 1.23837 0.96131 1.01229 0.97645 1.21412 0.81436 0.93250 0.97026 1.22271 0.97227 0.88952 0.91059 1.86456 1.82349 1.21550 1.46651 1.45499 1.04282 1.66502 1.17173 1.17786 0.83525 0.77937 0.84444 1.90771 1.84656 1.43553 1.21562 1.21192 0.94503 0.98740 0.91038 1.67525 1.24938 1.09270 1.14533 1.22620 0.87017 0.96773 0.99258 1.21650 0.97402 1.00167 0.96184 1.25044 0.91611 0.95882 1.05248 1.86533 1.51946 1.28404 1.67298 0.94743 0.84087 0.88129 0.74156 1.21540 0.97418 0.93836 0.95148 1.22214 0.91925 0.97543 1.01261 1.23588 0.94888 1.00027 0.98301 0.93793 0.89386 0.93826 0.87986 0.89843 0.92679 0.91537 0.77141 0.74922 0.81989 0.86230 0.77127 1.17369 1.17718 0.83502 0.83038 0.89698 0.88081 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.61 10.71 -35.23 -0.38 -0.99 16 3 C 0.06 0.00 3.96 -25.92 -0.10 -0.10 16 4 H 0.09 -0.15 7.43 -51.93 -0.39 -0.54 16 5 C -0.15 0.03 7.17 -25.92 -0.19 -0.16 16 6 C 0.16 0.15 0.93 -131.01 -0.12 0.03 16 7 C 0.08 0.05 6.06 37.16 0.23 0.28 16 8 O -0.56 -0.75 13.34 -35.23 -0.47 -1.22 16 9 N -0.68 -1.33 4.92 -47.69 -0.23 -1.56 16 10 C 0.58 2.08 7.47 -12.18 -0.09 1.99 16 11 O -0.53 -2.99 14.76 5.35 0.08 -2.91 16 12 C 0.08 0.21 6.75 -83.01 -0.56 -0.35 16 13 N -0.45 -0.78 9.55 -9.80 -0.09 -0.87 16 14 C 0.10 -0.02 9.84 -17.57 -0.17 -0.19 16 15 C -0.15 0.10 5.40 -104.36 -0.56 -0.47 16 16 C -0.07 0.10 2.83 36.01 0.10 0.21 16 17 O -0.54 0.58 12.78 -35.23 -0.45 0.13 16 18 Si 0.69 -1.57 29.82 -169.99 -5.07 -6.64 16 19 C -0.05 0.00 9.76 -39.31 -0.38 -0.38 16 20 C -0.11 -0.15 9.63 -39.05 -0.38 -0.52 16 21 C -0.13 -0.13 6.69 -25.92 -0.17 -0.31 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 24 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 25 H 0.10 0.00 8.14 -51.93 -0.42 -0.43 16 26 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 27 H 0.06 -0.08 7.37 -51.93 -0.38 -0.46 16 28 H 0.07 0.13 7.16 -51.93 -0.37 -0.24 16 29 H 0.38 -0.97 9.12 45.56 0.42 -0.55 16 30 H 0.41 0.48 8.04 -40.82 -0.33 0.15 16 31 H 0.16 -0.41 4.89 -52.49 -0.26 -0.67 16 32 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 33 H 0.38 -1.84 8.70 45.56 0.40 -1.44 16 34 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 35 H -0.25 0.00 7.11 56.52 0.40 0.41 16 36 H 0.15 -0.21 8.06 -52.49 -0.42 -0.63 16 37 H 0.15 0.14 7.64 -52.49 -0.40 -0.26 16 38 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 39 H 0.10 0.21 8.14 -51.93 -0.42 -0.22 16 LS Contribution 330.73 15.07 4.98 4.98 Total: 0.00 -8.42 330.73 -7.24 -15.67 By element: Atomic # 1 Polarization: -3.39 SS G_CDS: -4.30 Total: -7.70 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -1.31 Total: 1.10 kcal Atomic # 7 Polarization: -2.10 SS G_CDS: -0.33 Total: -2.43 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -1.22 Total: -4.99 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.07 Total: -6.64 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -8.42 -7.24 -15.67 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_13287726.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.488 kcal (2) G-P(sol) polarization free energy of solvation -8.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds