Wall clock time and date at job start Sun Mar 7 2021 09:04:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42896 * 113.99826 * 2 1 4 4 H 1.08996 * 112.85208 * 341.19405 * 3 2 1 5 5 C 1.53786 * 113.61449 * 112.50147 * 3 2 1 6 6 C 1.53785 * 87.07950 * 89.11558 * 5 3 2 7 7 C 1.53000 * 113.61361 * 139.98646 * 6 5 3 8 8 O 1.42895 * 109.47449 * 84.62326 * 7 6 5 9 9 N 1.46505 * 113.69147 * 270.87421 * 6 5 3 10 10 C 1.34771 * 120.00038 * 161.05744 * 9 6 5 11 11 O 1.21622 * 119.99839 * 5.04029 * 10 9 6 12 12 C 1.47268 * 119.99926 * 185.04655 * 10 9 6 13 13 C 1.36764 * 126.94300 * 359.68606 * 12 10 9 14 14 N 1.34657 * 108.39725 * 179.83478 * 13 12 10 15 15 C 1.46503 * 124.85004 * 180.14409 * 14 13 12 16 16 C 1.36447 * 110.29527 * 0.44145 * 14 13 12 17 17 C 1.50702 * 125.56830 * 179.70323 * 16 14 13 18 18 O 1.42895 * 109.47429 * 330.00377 * 17 16 14 19 19 Si 1.86292 * 109.47156 * 209.99955 * 17 16 14 20 20 C 1.34482 * 108.85686 * 359.72805 * 16 14 13 21 21 C 1.53775 * 87.08113 * 25.43339 * 6 5 3 22 22 H 1.08991 * 109.47361 * 300.00047 * 1 2 3 23 23 H 1.09005 * 109.46895 * 60.00138 * 1 2 3 24 24 H 1.09006 * 109.46713 * 179.97438 * 1 2 3 25 25 H 1.09000 * 113.61685 * 203.66387 * 5 3 2 26 26 H 1.09002 * 113.61025 * 334.56920 * 5 3 2 27 27 H 1.09000 * 109.47045 * 204.62812 * 7 6 5 28 28 H 1.09004 * 109.46956 * 324.61936 * 7 6 5 29 29 H 0.96700 * 114.00471 * 180.02562 * 8 7 6 30 30 H 0.97005 * 119.99717 * 341.05135 * 9 6 5 31 31 H 1.08007 * 125.80298 * 359.97256 * 13 12 10 32 32 H 1.08993 * 109.47104 * 270.33696 * 15 14 13 33 33 H 1.09005 * 109.47115 * 30.33879 * 15 14 13 34 34 H 1.09006 * 109.46666 * 150.33781 * 15 14 13 35 35 H 1.09007 * 109.46734 * 90.00178 * 17 16 14 36 36 H 0.96707 * 114.00030 * 299.99591 * 18 17 16 37 37 H 1.48502 * 110.00047 * 58.68345 * 19 17 16 38 38 H 1.48498 * 110.00207 * 180.02562 * 19 17 16 39 39 H 1.08001 * 126.82889 * 179.97438 * 20 16 14 40 40 H 1.08997 * 113.61579 * 220.01846 * 21 6 5 41 41 H 1.09003 * 113.69191 * 89.12644 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7534 1.6489 1.3018 6 6 4.0061 1.0331 0.6565 7 6 5.2909 1.8112 0.9476 8 8 5.8260 1.3941 2.2053 9 7 4.1455 -0.4054 0.8969 10 6 4.9479 -1.1460 0.1070 11 8 5.6265 -0.6071 -0.7463 12 6 5.0028 -2.6078 0.2771 13 6 4.3101 -3.3559 1.1886 14 7 4.6384 -4.6500 1.0137 15 6 4.1010 -5.7637 1.7994 16 6 5.5482 -4.7753 0.0045 17 6 6.1538 -6.0696 -0.4741 18 8 6.2260 -6.9929 0.6141 19 14 7.8673 -5.7481 -1.1305 20 6 5.8164 -3.5549 -0.4928 21 6 3.3756 1.3719 -0.7044 22 1 -0.3633 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 2.8389 2.7198 1.4863 26 1 2.3926 1.0963 2.1693 27 1 6.0195 1.6171 0.1604 28 1 5.0696 2.8779 0.9827 29 1 6.6429 1.8472 2.4550 30 1 3.6602 -0.8247 1.6247 31 1 3.6158 -2.9739 1.9225 32 1 4.7334 -5.9319 2.6710 33 1 3.0891 -5.5232 2.1256 34 1 4.0806 -6.6645 1.1860 35 1 5.5340 -6.4896 -1.2664 36 1 6.7629 -6.6842 1.3569 37 1 8.7132 -5.1458 -0.0689 38 1 8.4753 -7.0166 -1.6063 39 1 6.4960 -3.3192 -1.2984 40 1 3.5170 0.5958 -1.4566 41 1 3.6305 2.3668 -1.0697 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_13287730.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:09 Heat of formation + Delta-G solvation = -72.787618 kcal Electronic energy + Delta-G solvation = -25228.570393 eV Core-core repulsion = 21498.657499 eV Total energy + Delta-G solvation = -3729.912893 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.45702 -41.50983 -39.32772 -37.92119 -37.75890 -36.51013 -34.12761 -33.54870 -31.30191 -28.96059 -27.52257 -27.24261 -26.82240 -26.25278 -24.20383 -22.90621 -20.96698 -20.75812 -20.01093 -19.08499 -18.23073 -17.58161 -17.46237 -16.95476 -16.80212 -16.70454 -16.53540 -15.99667 -15.77243 -15.48886 -15.40832 -15.23729 -14.76276 -14.61480 -14.41089 -14.08657 -13.61902 -13.46602 -13.31820 -13.23351 -13.18603 -13.02232 -12.68146 -12.40575 -12.13947 -12.01024 -11.88067 -11.47699 -11.11358 -10.94640 -10.57329 -10.49565 -9.92179 -9.52983 -9.18354 -4.89960 0.79448 1.04630 1.46494 1.62527 1.80464 2.06210 2.28256 2.64933 2.76560 3.15133 3.20562 3.51098 3.57184 3.64946 3.78803 3.90697 3.97263 4.15757 4.31569 4.39421 4.42218 4.47466 4.51884 4.53154 4.54523 4.57885 4.68832 4.69502 4.74167 4.78140 4.85421 4.90448 4.93977 5.00474 5.07584 5.11148 5.64930 5.74033 5.98529 6.23951 6.32156 6.34544 6.74788 6.83915 7.46192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.385 6.385 3 C 0.065 3.935 4 H 0.098 0.902 5 C -0.140 4.140 6 C 0.152 3.848 7 C 0.077 3.923 8 O -0.582 6.582 9 N -0.681 5.681 10 C 0.593 3.407 11 O -0.588 6.588 12 C -0.257 4.257 13 C 0.067 3.933 14 N -0.427 5.427 15 C 0.063 3.937 16 C -0.022 4.022 17 C -0.043 4.043 18 O -0.540 6.540 19 Si 0.773 3.227 20 C -0.157 4.157 21 C -0.142 4.142 22 H 0.054 0.946 23 H 0.046 0.954 24 H 0.090 0.910 25 H 0.125 0.875 26 H 0.083 0.917 27 H 0.035 0.965 28 H 0.077 0.923 29 H 0.391 0.609 30 H 0.406 0.594 31 H 0.197 0.803 32 H 0.086 0.914 33 H 0.100 0.900 34 H 0.095 0.905 35 H 0.133 0.867 36 H 0.386 0.614 37 H -0.296 1.296 38 H -0.285 1.285 39 H 0.155 0.845 40 H 0.056 0.944 41 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.142 1.386 3.262 6.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.304 6.304 3 C 0.006 3.994 4 H 0.115 0.885 5 C -0.177 4.177 6 C 0.065 3.935 7 C -0.002 4.002 8 O -0.390 6.390 9 N -0.330 5.330 10 C 0.384 3.616 11 O -0.470 6.470 12 C -0.267 4.267 13 C -0.071 4.071 14 N -0.102 5.102 15 C -0.077 4.077 16 C -0.131 4.131 17 C -0.153 4.153 18 O -0.348 6.348 19 Si 0.677 3.323 20 C -0.181 4.181 21 C -0.180 4.180 22 H 0.072 0.928 23 H 0.065 0.935 24 H 0.108 0.892 25 H 0.143 0.857 26 H 0.101 0.899 27 H 0.053 0.947 28 H 0.095 0.905 29 H 0.240 0.760 30 H 0.242 0.758 31 H 0.214 0.786 32 H 0.105 0.895 33 H 0.119 0.881 34 H 0.114 0.886 35 H 0.151 0.849 36 H 0.235 0.765 37 H -0.223 1.223 38 H -0.212 1.212 39 H 0.172 0.828 40 H 0.075 0.925 41 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -4.767 0.369 2.525 5.407 hybrid contribution 0.241 0.144 1.335 1.364 sum -4.526 0.513 3.860 5.971 Atomic orbital electron populations 1.22945 0.79744 1.03476 1.00804 1.87904 1.20912 1.26978 1.94584 1.23120 0.94314 0.85712 0.96208 0.88461 1.23792 0.93065 1.02918 0.97945 1.21339 0.93868 0.81084 0.97258 1.22503 0.94731 0.97614 0.85364 1.86408 1.45894 1.68860 1.37802 1.45064 1.47077 1.07125 1.33750 1.17541 0.78110 0.85915 0.80079 1.90693 1.45070 1.74041 1.37228 1.20418 1.08796 0.92256 1.05195 1.22261 1.01218 0.82864 1.00709 1.43688 1.32238 1.07155 1.27089 1.22430 1.00820 0.88118 0.96320 1.20867 0.99240 0.96712 0.96299 1.24741 1.11496 0.86214 0.92877 1.86551 1.73594 1.45000 1.29619 0.93326 0.71759 0.80895 0.86359 1.21779 1.03390 0.90292 1.02611 1.23584 0.94897 1.03350 0.96205 0.92772 0.93537 0.89156 0.85719 0.89877 0.94690 0.90478 0.75971 0.75815 0.78639 0.89528 0.88113 0.88638 0.84938 0.76506 1.22299 1.21208 0.82802 0.92541 0.86235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.39 -1.01 10.13 -148.98 -1.51 -2.51 16 3 C 0.06 -0.03 4.38 31.12 0.14 0.11 16 4 H 0.10 -0.42 7.87 -2.39 -0.02 -0.44 16 5 C -0.14 0.31 7.20 31.12 0.22 0.53 16 6 C 0.15 0.54 0.81 4.13 0.00 0.54 16 7 C 0.08 0.29 6.28 71.98 0.45 0.74 16 8 O -0.58 -2.62 13.38 -148.98 -1.99 -4.61 16 9 N -0.68 -3.97 4.36 -423.91 -1.85 -5.82 16 10 C 0.59 7.07 7.29 86.62 0.63 7.70 16 11 O -0.59 -11.12 15.07 -4.10 -0.06 -11.18 16 12 C -0.26 -2.18 6.29 -19.04 -0.12 -2.30 16 13 C 0.07 0.12 10.83 83.91 0.91 1.03 16 14 N -0.43 -0.26 3.09 -533.23 -1.65 -1.90 16 15 C 0.06 -0.36 9.81 127.77 1.25 0.89 16 16 C -0.02 -0.07 6.14 40.98 0.25 0.18 16 17 C -0.04 0.01 2.87 71.24 0.20 0.21 16 18 O -0.54 0.25 10.32 -148.98 -1.54 -1.29 16 19 Si 0.77 0.62 31.12 68.60 2.13 2.76 16 20 C -0.16 -1.16 9.49 23.62 0.22 -0.94 16 21 C -0.14 -0.48 6.81 31.12 0.21 -0.27 16 22 H 0.05 -0.28 8.14 -2.39 -0.02 -0.30 16 23 H 0.05 -0.16 8.14 -2.38 -0.02 -0.18 16 24 H 0.09 -0.36 8.14 -2.38 -0.02 -0.38 16 25 H 0.12 -0.79 7.93 -2.39 -0.02 -0.81 16 26 H 0.08 -0.18 8.10 -2.39 -0.02 -0.20 16 27 H 0.03 0.32 7.21 -2.39 -0.02 0.30 16 28 H 0.08 -0.15 7.90 -2.38 -0.02 -0.17 16 29 H 0.39 -1.13 9.12 -74.06 -0.68 -1.81 16 30 H 0.41 0.79 7.64 -92.70 -0.71 0.08 16 31 H 0.20 -0.96 7.46 -2.91 -0.02 -0.98 16 32 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 33 H 0.10 -0.93 8.13 -2.38 -0.02 -0.95 16 34 H 0.09 -0.42 6.73 -2.38 -0.02 -0.44 16 35 H 0.13 -0.29 7.96 -2.38 -0.02 -0.31 16 36 H 0.39 -1.82 8.70 -74.05 -0.64 -2.47 16 37 H -0.30 -2.16 7.11 99.48 0.71 -1.45 16 38 H -0.29 -1.72 7.11 99.48 0.71 -1.01 16 39 H 0.15 0.97 6.89 -2.91 -0.02 0.95 16 40 H 0.06 0.60 7.36 -2.39 -0.02 0.58 16 41 H 0.12 -0.11 8.10 -2.39 -0.02 -0.13 16 Total: 0.00 -24.05 340.39 -1.76 -25.82 By element: Atomic # 1 Polarization: -9.92 SS G_CDS: -0.92 Total: -10.84 kcal Atomic # 6 Polarization: 3.97 SS G_CDS: 5.61 Total: 9.58 kcal Atomic # 7 Polarization: -4.23 SS G_CDS: -3.49 Total: -7.72 kcal Atomic # 8 Polarization: -14.50 SS G_CDS: -5.10 Total: -19.60 kcal Atomic # 14 Polarization: 0.62 SS G_CDS: 2.13 Total: 2.76 kcal Total: -24.05 -1.76 -25.82 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_13287730.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.970 kcal (2) G-P(sol) polarization free energy of solvation -24.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.818 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds