Wall clock time and date at job start Sun Mar 7 2021 09:04:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42900 * 113.99680 * 2 1 4 4 H 1.08994 * 112.85100 * 339.66678 * 3 2 1 5 5 C 1.53785 * 113.68923 * 110.93839 * 3 2 1 6 6 C 1.53779 * 87.08193 * 89.12368 * 5 3 2 7 7 C 1.52999 * 113.61253 * 139.98157 * 6 5 3 8 8 O 1.42900 * 109.47190 * 83.83838 * 7 6 5 9 9 N 1.46506 * 113.61596 * 270.88492 * 6 5 3 10 10 C 1.34777 * 119.99820 * 161.59727 * 9 6 5 11 11 O 1.21556 * 120.00132 * 5.20561 * 10 9 6 12 12 C 1.47840 * 119.99854 * 185.20731 * 10 9 6 13 13 C 1.39517 * 120.55593 * 359.72269 * 12 10 9 14 14 N 1.31704 * 120.56367 * 179.72811 * 13 12 10 15 15 C 1.31928 * 121.87931 * 0.53817 * 14 13 12 16 16 C 1.38352 * 121.07567 * 359.75031 * 15 14 13 17 17 C 1.50707 * 120.34544 * 179.97438 * 16 15 14 18 18 O 1.42901 * 109.46833 * 244.97853 * 17 16 15 19 19 Si 1.86302 * 109.47059 * 4.97643 * 17 16 15 20 20 C 1.38354 * 119.30769 * 359.97438 * 16 15 14 21 21 C 1.53779 * 87.08217 * 25.43559 * 6 5 3 22 22 H 1.08995 * 109.46916 * 60.00349 * 1 2 3 23 23 H 1.09004 * 109.46670 * 179.97438 * 1 2 3 24 24 H 1.08992 * 109.46951 * 299.99407 * 1 2 3 25 25 H 1.08992 * 113.61486 * 203.67999 * 5 3 2 26 26 H 1.09004 * 113.60943 * 334.57792 * 5 3 2 27 27 H 1.08996 * 109.47048 * 203.83830 * 7 6 5 28 28 H 1.09002 * 109.47450 * 323.83900 * 7 6 5 29 29 H 0.96697 * 114.00077 * 179.97438 * 8 7 6 30 30 H 0.96992 * 119.99771 * 341.59421 * 9 6 5 31 31 H 1.08000 * 119.72336 * 359.97438 * 13 12 10 32 32 H 1.07997 * 119.46210 * 179.72693 * 15 14 13 33 33 H 1.08997 * 109.47281 * 124.98073 * 17 16 15 34 34 H 0.96695 * 113.99982 * 60.00145 * 18 17 16 35 35 H 1.48500 * 109.99589 * 180.02562 * 19 17 16 36 36 H 1.48499 * 109.99822 * 301.32037 * 19 17 16 37 37 H 1.07999 * 120.85752 * 179.97438 * 20 16 15 38 38 H 1.09002 * 113.61167 * 220.02207 * 21 6 5 39 39 H 1.08993 * 113.62051 * 89.11195 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3219 2.0752 -0.3490 5 6 2.7213 1.6653 1.3153 6 6 3.9896 1.0427 0.7084 7 6 5.2665 1.8254 1.0212 8 8 5.7608 1.4373 2.3046 9 7 4.1220 -0.3927 0.9703 10 6 4.9515 -1.1415 0.2169 11 8 5.6601 -0.6118 -0.6167 12 6 4.9996 -2.6072 0.4042 13 6 4.1955 -3.2266 1.3615 14 7 4.2343 -4.5329 1.5249 15 6 5.0317 -5.3014 0.8079 16 6 5.8640 -4.7632 -0.1574 17 6 6.7687 -5.6564 -0.9666 18 8 8.1321 -5.3484 -0.6692 19 14 6.4269 -7.4373 -0.5396 20 6 5.8570 -3.3964 -0.3720 21 6 3.3924 1.3645 -0.6717 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 2.8015 2.7383 1.4888 26 1 2.3396 1.1229 2.1804 27 1 6.0189 1.6114 0.2621 28 1 5.0468 2.8930 1.0241 29 1 6.5710 1.8943 2.5687 30 1 3.6127 -0.8040 1.6860 31 1 3.5328 -2.6303 1.9711 32 1 5.0351 -6.3679 0.9775 33 1 6.5832 -5.4953 -2.0286 34 1 8.3688 -5.4695 0.2605 35 1 7.3132 -8.3283 -1.3306 36 1 6.6455 -7.6625 0.9118 37 1 6.4967 -2.9496 -1.1188 38 1 3.5526 0.5794 -1.4106 39 1 3.6562 2.3553 -1.0414 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_13287814.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:19 Heat of formation + Delta-G solvation = -83.726170 kcal Electronic energy + Delta-G solvation = -24519.959095 eV Core-core repulsion = 20816.883349 eV Total energy + Delta-G solvation = -3703.075746 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.14466 -41.29672 -39.54970 -38.09054 -37.88547 -36.59339 -34.49803 -33.79495 -32.68939 -28.99814 -27.32498 -27.29038 -26.88842 -25.93908 -23.92274 -23.31770 -21.71473 -20.40035 -19.32532 -18.30269 -18.09961 -17.98757 -17.68847 -17.59526 -16.71614 -16.59725 -16.44450 -16.11667 -16.03250 -15.86127 -15.42461 -15.02211 -14.65971 -14.52315 -14.41350 -14.24340 -13.66339 -13.47943 -13.34084 -13.25917 -12.81432 -12.73145 -12.19006 -12.09367 -11.96125 -11.62804 -11.38499 -11.09085 -10.85961 -10.69321 -10.54901 -10.51176 -10.37504 -10.01098 -4.94513 -0.56486 -0.04472 1.21717 1.57270 1.69903 1.90063 1.97666 2.62864 2.70628 3.02985 3.12348 3.31969 3.40514 3.44850 3.58167 3.64432 3.66802 3.71118 3.81255 4.09688 4.12977 4.26891 4.35849 4.43015 4.51167 4.52640 4.57683 4.62329 4.64244 4.69003 4.81951 4.82981 4.90219 4.91595 4.99894 5.03597 5.31270 5.50619 6.28059 6.39681 6.41790 6.63647 6.78116 7.09384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.386 6.386 3 C 0.063 3.937 4 H 0.099 0.901 5 C -0.140 4.140 6 C 0.149 3.851 7 C 0.076 3.924 8 O -0.583 6.583 9 N -0.673 5.673 10 C 0.569 3.431 11 O -0.570 6.570 12 C -0.194 4.194 13 C 0.147 3.853 14 N -0.493 5.493 15 C 0.126 3.874 16 C -0.172 4.172 17 C -0.083 4.083 18 O -0.547 6.547 19 Si 0.776 3.224 20 C -0.002 4.002 21 C -0.140 4.140 22 H 0.047 0.953 23 H 0.091 0.909 24 H 0.054 0.946 25 H 0.127 0.873 26 H 0.085 0.915 27 H 0.036 0.964 28 H 0.080 0.920 29 H 0.393 0.607 30 H 0.410 0.590 31 H 0.181 0.819 32 H 0.184 0.816 33 H 0.128 0.872 34 H 0.387 0.613 35 H -0.296 1.296 36 H -0.271 1.271 37 H 0.137 0.863 38 H 0.057 0.943 39 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.528 2.004 1.916 6.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.305 6.305 3 C 0.005 3.995 4 H 0.117 0.883 5 C -0.178 4.178 6 C 0.062 3.938 7 C -0.003 4.003 8 O -0.390 6.390 9 N -0.323 5.323 10 C 0.356 3.644 11 O -0.451 6.451 12 C -0.199 4.199 13 C -0.012 4.012 14 N -0.201 5.201 15 C -0.030 4.030 16 C -0.174 4.174 17 C -0.192 4.192 18 O -0.355 6.355 19 Si 0.679 3.321 20 C -0.029 4.029 21 C -0.178 4.178 22 H 0.066 0.934 23 H 0.109 0.891 24 H 0.073 0.927 25 H 0.145 0.855 26 H 0.103 0.897 27 H 0.055 0.945 28 H 0.098 0.902 29 H 0.242 0.758 30 H 0.248 0.752 31 H 0.198 0.802 32 H 0.201 0.799 33 H 0.146 0.854 34 H 0.237 0.763 35 H -0.223 1.223 36 H -0.197 1.197 37 H 0.155 0.845 38 H 0.076 0.924 39 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -5.692 0.864 1.635 5.985 hybrid contribution 1.803 1.359 0.092 2.260 sum -3.889 2.223 1.727 4.801 Atomic orbital electron populations 1.22954 0.79563 1.03582 1.00888 1.87882 1.21083 1.26959 1.94604 1.23138 0.94346 0.85803 0.96193 0.88344 1.23816 0.92759 1.03043 0.98162 1.21440 0.94431 0.80441 0.97492 1.22501 0.94936 0.97992 0.84843 1.86405 1.47473 1.69874 1.35298 1.45173 1.44073 1.07798 1.35251 1.18092 0.79349 0.86291 0.80676 1.90744 1.43310 1.74071 1.36959 1.21043 1.02628 0.94247 1.02001 1.23309 0.94040 0.90947 0.92856 1.67805 1.20808 1.05927 1.25525 1.23277 0.89366 1.01049 0.89316 1.21365 1.01022 0.94889 1.00169 1.25316 0.81303 1.09293 1.03246 1.86610 1.25851 1.89773 1.33271 0.93996 0.89039 0.70923 0.78096 1.21629 0.93114 0.92926 0.95192 1.23589 0.94839 1.03616 0.95796 0.93434 0.89098 0.92717 0.85512 0.89669 0.94546 0.90196 0.75794 0.75245 0.80198 0.79934 0.85394 0.76318 1.22341 1.19676 0.84526 0.92394 0.85963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.10 10.85 113.37 1.23 1.13 16 2 O -0.39 -0.37 10.14 -148.98 -1.51 -1.88 16 3 C 0.06 -0.14 4.36 31.12 0.14 -0.01 16 4 H 0.10 -0.58 7.88 -2.39 -0.02 -0.60 16 5 C -0.14 0.56 7.20 31.12 0.22 0.78 16 6 C 0.15 0.19 0.80 4.13 0.00 0.19 16 7 C 0.08 0.12 6.27 71.98 0.45 0.57 16 8 O -0.58 -1.47 13.39 -148.98 -2.00 -3.47 16 9 N -0.67 -2.21 4.34 -423.37 -1.84 -4.05 16 10 C 0.57 4.85 7.26 86.78 0.63 5.48 16 11 O -0.57 -8.60 14.53 -3.89 -0.06 -8.66 16 12 C -0.19 -1.13 5.89 -20.00 -0.12 -1.25 16 13 C 0.15 0.37 10.71 85.02 0.91 1.28 16 14 N -0.49 -1.75 10.35 -194.75 -2.01 -3.77 16 15 C 0.13 0.08 9.84 84.71 0.83 0.92 16 16 C -0.17 -0.27 5.35 -19.81 -0.11 -0.37 16 17 C -0.08 0.04 2.82 71.24 0.20 0.24 16 18 O -0.55 -1.74 12.84 -148.98 -1.91 -3.66 16 19 Si 0.78 -2.71 29.91 68.60 2.05 -0.66 16 20 C 0.00 -0.01 9.38 22.73 0.21 0.20 16 21 C -0.14 -0.14 6.83 31.12 0.21 0.07 16 22 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 23 H 0.09 -0.43 8.14 -2.38 -0.02 -0.45 16 24 H 0.05 -0.33 8.14 -2.39 -0.02 -0.35 16 25 H 0.13 -1.01 7.94 -2.39 -0.02 -1.03 16 26 H 0.08 -0.33 8.10 -2.38 -0.02 -0.35 16 27 H 0.04 0.24 7.16 -2.39 -0.02 0.22 16 28 H 0.08 -0.31 7.92 -2.39 -0.02 -0.33 16 29 H 0.39 -1.81 9.12 -74.06 -0.68 -2.49 16 30 H 0.41 -0.14 6.75 -92.71 -0.63 -0.77 16 31 H 0.18 -0.51 6.43 -2.91 -0.02 -0.52 16 32 H 0.18 -0.84 4.85 -2.91 -0.01 -0.85 16 33 H 0.13 -0.22 7.96 -2.39 -0.02 -0.24 16 34 H 0.39 -1.06 8.70 -74.06 -0.64 -1.71 16 35 H -0.30 -1.22 7.11 99.48 0.71 -0.51 16 36 H -0.27 0.22 7.01 99.48 0.70 0.92 16 37 H 0.14 1.12 7.74 -2.91 -0.02 1.10 16 38 H 0.06 0.44 7.41 -2.39 -0.02 0.43 16 39 H 0.12 -0.39 8.10 -2.39 -0.02 -0.41 16 Total: 0.00 -21.82 327.65 -3.26 -25.08 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -0.80 Total: -8.18 kcal Atomic # 6 Polarization: 4.42 SS G_CDS: 4.82 Total: 9.24 kcal Atomic # 7 Polarization: -3.96 SS G_CDS: -3.85 Total: -7.81 kcal Atomic # 8 Polarization: -12.19 SS G_CDS: -5.47 Total: -17.67 kcal Atomic # 14 Polarization: -2.71 SS G_CDS: 2.05 Total: -0.66 kcal Total: -21.82 -3.26 -25.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_13287814.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.648 kcal (2) G-P(sol) polarization free energy of solvation -21.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.470 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.078 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.726 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds