Wall clock time and date at job start Sun Mar 7 2021 09:04:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42903 * 113.99837 * 2 1 4 4 H 1.09000 * 112.85128 * 341.19317 * 3 2 1 5 5 C 1.53775 * 113.69245 * 112.46319 * 3 2 1 6 6 C 1.53780 * 87.08086 * 139.98933 * 5 3 2 7 7 C 1.53002 * 113.68888 * 89.12655 * 6 5 3 8 8 O 1.42902 * 109.47433 * 76.35956 * 7 6 5 9 9 N 1.46494 * 113.61535 * 220.01497 * 6 5 3 10 10 C 1.34783 * 119.99914 * 162.32532 * 9 6 5 11 11 O 1.21280 * 119.99865 * 355.02140 * 10 9 6 12 12 C 1.50699 * 119.99812 * 175.02507 * 10 9 6 13 13 C 1.50701 * 109.46893 * 179.97438 * 12 10 9 14 14 C 1.34848 * 125.89243 * 275.03903 * 13 12 10 15 15 C 1.40891 * 107.42117 * 179.73511 * 14 13 12 16 16 C 1.34853 * 107.41398 * 0.37910 * 15 14 13 17 17 C 1.50693 * 125.89046 * 179.88759 * 16 15 14 18 18 O 1.42905 * 109.46999 * 244.69256 * 17 16 15 19 19 Si 1.86307 * 109.47153 * 4.68838 * 17 16 15 20 20 N 1.36342 * 125.89087 * 95.00040 * 13 12 10 21 21 C 1.53773 * 87.08223 * 334.56894 * 6 5 3 22 22 H 1.08999 * 109.46905 * 60.00243 * 1 2 3 23 23 H 1.09000 * 109.46813 * 180.02562 * 1 2 3 24 24 H 1.09005 * 109.47095 * 300.00137 * 1 2 3 25 25 H 1.09001 * 113.61507 * 25.44455 * 5 3 2 26 26 H 1.08997 * 113.61633 * 254.53650 * 5 3 2 27 27 H 1.09000 * 109.47339 * 196.35657 * 7 6 5 28 28 H 1.08999 * 109.47562 * 316.36465 * 7 6 5 29 29 H 0.96695 * 114.00740 * 180.02562 * 8 7 6 30 30 H 0.96995 * 120.00707 * 342.32698 * 9 6 5 31 31 H 1.09005 * 109.47480 * 59.99886 * 12 10 9 32 32 H 1.09001 * 109.47014 * 299.99305 * 12 10 9 33 33 H 1.08002 * 126.28810 * 359.97438 * 14 13 12 34 34 H 1.07997 * 126.29454 * 180.24364 * 15 14 13 35 35 H 1.08999 * 109.47326 * 124.69361 * 17 16 15 36 36 H 0.96703 * 113.99811 * 180.02562 * 18 17 16 37 37 H 1.48503 * 110.00007 * 178.68164 * 19 17 16 38 38 H 1.48501 * 109.99803 * 300.00087 * 19 17 16 39 39 H 0.96998 * 125.63600 * 0.05403 * 20 13 12 40 40 H 1.08996 * 113.61634 * 139.97901 * 21 6 5 41 41 H 1.09004 * 113.61556 * 270.87889 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7531 1.6512 1.3013 6 6 3.8220 2.3200 0.4209 7 6 3.5414 3.7950 0.1271 8 8 3.8570 4.5788 1.2795 9 7 5.1928 2.0821 0.8795 10 6 6.2288 2.2881 0.0423 11 8 6.0230 2.5829 -1.1160 12 6 7.6427 2.1521 0.5455 13 6 8.6054 2.4310 -0.5799 14 6 9.0302 1.5378 -1.4965 15 6 9.9118 2.2114 -2.3649 16 6 9.9988 3.4885 -1.9407 17 6 10.8336 4.5736 -2.5704 18 8 11.8480 4.9873 -1.6527 19 14 11.6298 3.9222 -4.1237 20 7 9.1966 3.6301 -0.8474 21 6 3.3755 1.3720 -0.7045 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 3.1169 0.7773 1.8418 26 1 2.2132 2.3505 1.9397 27 1 4.1545 4.1212 -0.7130 28 1 2.4877 3.9221 -0.1211 29 1 3.7027 5.5265 1.1651 30 1 5.3550 1.7762 1.7856 31 1 7.8009 1.1392 0.9158 32 1 7.8111 2.8647 1.3530 33 1 8.7438 0.4982 -1.5565 34 1 10.4255 1.7831 -3.2128 35 1 10.1980 5.4241 -2.8170 36 1 12.4243 5.6857 -1.9922 37 1 12.4303 4.9922 -4.7714 38 1 12.4991 2.7623 -3.8008 39 1 9.0679 4.4486 -0.3430 40 1 3.3381 1.8458 -1.6854 41 1 3.9095 0.4217 -0.7125 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_14644196.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:48 Heat of formation + Delta-G solvation = -78.750003 kcal Electronic energy + Delta-G solvation = -24420.168902 eV Core-core repulsion = 20689.997461 eV Total energy + Delta-G solvation = -3730.171442 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.21612 -41.58269 -39.61033 -37.99812 -37.72868 -36.67155 -34.21100 -32.89316 -31.76749 -29.57441 -28.50596 -27.33663 -26.83110 -25.25220 -23.87947 -21.75123 -21.16162 -20.82454 -20.08341 -18.60929 -18.55782 -18.39320 -17.86644 -17.81831 -16.86246 -16.36096 -16.12100 -15.99855 -15.85538 -15.42102 -15.32189 -14.83278 -14.71538 -14.45265 -14.15081 -13.95340 -13.74664 -13.59904 -13.44032 -13.23241 -13.00056 -12.88574 -12.69715 -12.47856 -12.32480 -11.90392 -11.78209 -11.73862 -11.18996 -10.61202 -10.53478 -10.51542 -10.01838 -9.61353 -8.79438 -4.84196 1.21306 1.33506 1.67018 1.73714 1.97994 2.03153 2.31886 2.56085 2.83930 2.94951 3.27001 3.37336 3.52883 3.67801 3.74379 3.89452 3.97567 3.99297 4.13432 4.20851 4.29781 4.32174 4.38047 4.41938 4.46034 4.55174 4.64061 4.69059 4.71939 4.74777 4.90623 4.93350 5.00699 5.03670 5.41004 5.47550 5.54573 6.16615 6.19191 6.29987 6.41275 6.52712 6.55334 6.75780 7.32831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.061 3.939 4 H 0.091 0.909 5 C -0.150 4.150 6 C 0.159 3.841 7 C 0.083 3.917 8 O -0.567 6.567 9 N -0.710 5.710 10 C 0.516 3.484 11 O -0.521 6.521 12 C -0.073 4.073 13 C 0.040 3.960 14 C -0.173 4.173 15 C -0.184 4.184 16 C 0.036 3.964 17 C -0.056 4.056 18 O -0.543 6.543 19 Si 0.712 3.288 20 N -0.536 5.536 21 C -0.124 4.124 22 H 0.043 0.957 23 H 0.088 0.912 24 H 0.043 0.957 25 H 0.100 0.900 26 H 0.082 0.918 27 H 0.063 0.937 28 H 0.056 0.944 29 H 0.381 0.619 30 H 0.403 0.597 31 H 0.116 0.884 32 H 0.099 0.901 33 H 0.137 0.863 34 H 0.141 0.859 35 H 0.071 0.929 36 H 0.380 0.620 37 H -0.262 1.262 38 H -0.252 1.252 39 H 0.411 0.589 40 H 0.083 0.917 41 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.632 1.916 1.152 4.265 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.002 3.998 4 H 0.109 0.891 5 C -0.188 4.188 6 C 0.072 3.928 7 C 0.004 3.996 8 O -0.373 6.373 9 N -0.363 5.363 10 C 0.302 3.698 11 O -0.396 6.396 12 C -0.113 4.113 13 C -0.074 4.074 14 C -0.197 4.197 15 C -0.208 4.208 16 C -0.077 4.077 17 C -0.165 4.165 18 O -0.350 6.350 19 Si 0.611 3.389 20 N -0.131 5.131 21 C -0.162 4.162 22 H 0.062 0.938 23 H 0.106 0.894 24 H 0.061 0.939 25 H 0.118 0.882 26 H 0.101 0.899 27 H 0.081 0.919 28 H 0.074 0.926 29 H 0.229 0.771 30 H 0.238 0.762 31 H 0.134 0.866 32 H 0.118 0.882 33 H 0.155 0.845 34 H 0.159 0.841 35 H 0.089 0.911 36 H 0.228 0.772 37 H -0.187 1.187 38 H -0.176 1.176 39 H 0.247 0.753 40 H 0.102 0.898 41 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -3.063 0.905 0.578 3.245 hybrid contribution 0.193 1.939 1.202 2.289 sum -2.869 2.844 1.780 4.415 Atomic orbital electron populations 1.22843 0.80772 1.03142 1.00094 1.87963 1.19971 1.26677 1.94507 1.23610 0.94050 0.85835 0.96262 0.89121 1.23790 0.96333 1.01018 0.97632 1.21274 0.81672 0.92832 0.97045 1.22245 0.99218 0.89557 0.88543 1.86433 1.90291 1.22469 1.38085 1.45753 1.04864 1.69352 1.16284 1.20547 0.86548 0.76621 0.86085 1.90733 1.85621 1.46156 1.17106 1.20133 0.89692 1.05337 0.96167 1.19448 1.01310 0.85922 1.00715 1.20559 1.02757 0.99387 0.97045 1.20600 1.04989 0.92354 1.02902 1.19526 0.99493 0.95809 0.92917 1.24499 0.91920 0.98238 1.01837 1.86596 1.46375 1.59626 1.42426 0.94275 0.84731 0.80893 0.78971 1.41761 1.36046 1.10621 1.24668 1.23505 0.94470 0.99986 0.98261 0.93799 0.89387 0.93877 0.88201 0.89937 0.91862 0.92614 0.77137 0.76212 0.86588 0.88242 0.84494 0.84135 0.91140 0.77181 1.18736 1.17553 0.75255 0.89836 0.88096 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.62 10.72 -35.23 -0.38 -1.00 16 3 C 0.06 0.00 3.96 -25.92 -0.10 -0.10 16 4 H 0.09 -0.13 7.34 -51.93 -0.38 -0.52 16 5 C -0.15 0.10 7.22 -25.92 -0.19 -0.09 16 6 C 0.16 0.02 0.86 -131.01 -0.11 -0.09 16 7 C 0.08 0.00 6.20 37.16 0.23 0.23 16 8 O -0.57 0.02 13.53 -35.23 -0.48 -0.46 16 9 N -0.71 0.21 5.12 -46.86 -0.24 -0.03 16 10 C 0.52 0.77 7.48 -10.98 -0.08 0.69 16 11 O -0.52 -2.66 14.45 5.56 0.08 -2.58 16 12 C -0.07 0.04 6.24 -29.03 -0.18 -0.15 16 13 C 0.04 0.10 5.66 -81.79 -0.46 -0.36 16 14 C -0.17 -0.59 10.76 -39.78 -0.43 -1.02 16 15 C -0.18 -0.63 9.37 -39.78 -0.37 -1.01 16 16 C 0.04 0.11 6.53 -81.79 -0.53 -0.42 16 17 C -0.06 -0.06 3.07 36.00 0.11 0.05 16 18 O -0.54 -1.02 12.86 -35.23 -0.45 -1.47 16 19 Si 0.71 0.07 30.60 -169.99 -5.20 -5.13 16 20 N -0.54 -1.35 6.07 -5.44 -0.03 -1.38 16 21 C -0.12 -0.11 6.40 -25.92 -0.17 -0.28 16 22 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 23 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 24 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 25 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 27 H 0.06 0.11 7.21 -51.93 -0.37 -0.27 16 28 H 0.06 -0.09 7.32 -51.93 -0.38 -0.47 16 29 H 0.38 -1.41 9.12 45.56 0.42 -0.99 16 30 H 0.40 -0.98 8.71 -40.82 -0.36 -1.34 16 31 H 0.12 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 33 H 0.14 0.28 8.06 -52.49 -0.42 -0.14 16 34 H 0.14 0.25 6.23 -52.49 -0.33 -0.08 16 35 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 36 H 0.38 -0.86 8.74 45.56 0.40 -0.46 16 37 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 38 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 39 H 0.41 0.29 8.96 -40.82 -0.37 -0.07 16 40 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 41 H 0.10 0.21 8.14 -51.93 -0.42 -0.22 16 LS Contribution 345.00 15.07 5.20 5.20 Total: 0.00 -10.05 345.00 -7.90 -17.95 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -5.20 Total: -9.61 kcal Atomic # 6 Polarization: -0.29 SS G_CDS: -1.19 Total: -1.48 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -0.27 Total: -1.41 kcal Atomic # 8 Polarization: -4.28 SS G_CDS: -1.23 Total: -5.51 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.20 Total: -5.13 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -10.05 -7.90 -17.95 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_14644196.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.799 kcal (2) G-P(sol) polarization free energy of solvation -10.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.851 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.951 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.750 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds