Wall clock time and date at job start Sun Mar 7 2021 09:04:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42903 * 113.99956 * 2 1 4 4 H 1.09005 * 112.84803 * 20.33943 * 3 2 1 5 5 C 1.53781 * 113.61426 * 151.52988 * 3 2 1 6 6 C 1.53779 * 87.08281 * 140.06629 * 5 3 2 7 7 C 1.53006 * 113.61038 * 89.19989 * 6 5 3 8 8 O 1.42904 * 109.46727 * 178.42306 * 7 6 5 9 9 N 1.46494 * 113.61715 * 220.02043 * 6 5 3 10 10 C 1.34775 * 120.00084 * 295.15093 * 9 6 5 11 11 O 1.21286 * 119.99714 * 5.02099 * 10 9 6 12 12 C 1.50704 * 120.00173 * 185.02324 * 10 9 6 13 13 C 1.53535 * 109.81821 * 279.13513 * 12 10 9 14 14 C 1.53037 * 108.55941 * 179.57326 * 13 12 10 15 15 C 1.50204 * 110.36427 * 49.47370 * 14 13 12 16 16 C 1.50702 * 118.54996 * 159.96827 * 15 14 13 17 17 O 1.42901 * 109.47324 * 70.02089 * 16 15 14 18 18 Si 1.86297 * 109.47268 * 190.02432 * 16 15 14 19 19 C 1.31116 * 122.90620 * 339.99170 * 15 14 13 20 20 N 1.38918 * 121.84723 * 0.40344 * 19 15 14 21 21 C 1.53778 * 113.61841 * 249.13831 * 3 2 1 22 22 H 1.09005 * 109.47680 * 59.99788 * 1 2 3 23 23 H 1.09001 * 109.47147 * 179.97438 * 1 2 3 24 24 H 1.09001 * 109.47102 * 299.99636 * 1 2 3 25 25 H 1.09001 * 113.61800 * 254.61634 * 5 3 2 26 26 H 1.08999 * 113.61462 * 25.52101 * 5 3 2 27 27 H 1.08997 * 109.47067 * 298.41852 * 7 6 5 28 28 H 1.08994 * 109.47100 * 58.42438 * 7 6 5 29 29 H 0.96697 * 113.99778 * 180.02562 * 8 7 6 30 30 H 0.97002 * 120.00113 * 115.15194 * 9 6 5 31 31 H 1.08996 * 109.81161 * 40.00072 * 12 10 9 32 32 H 1.08997 * 109.62503 * 299.22847 * 13 12 10 33 33 H 1.09001 * 109.62617 * 59.79061 * 13 12 10 34 34 H 1.09002 * 109.27847 * 289.22123 * 14 13 12 35 35 H 1.09005 * 109.20556 * 169.67738 * 14 13 12 36 36 H 1.09008 * 109.46746 * 310.02062 * 16 15 14 37 37 H 0.96693 * 113.99924 * 59.99730 * 17 16 15 38 38 H 1.48493 * 110.00274 * 58.67974 * 18 16 15 39 39 H 1.48504 * 109.99847 * 179.97438 * 18 16 15 40 40 H 1.08002 * 119.07885 * 180.42879 * 19 15 14 41 41 H 0.97006 * 120.55913 * 166.66405 * 20 19 15 42 42 H 1.09002 * 113.61490 * 334.48500 * 21 3 2 43 43 H 1.08996 * 113.61389 * 105.38363 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3218 2.0752 0.3492 5 6 3.3923 1.3645 0.6717 6 6 3.8113 2.3247 -0.4540 7 6 3.5381 3.7965 -0.1373 8 8 3.9924 4.6092 -1.2214 9 7 5.1705 2.0919 -0.9484 10 6 6.2266 2.2894 -0.1347 11 8 6.0492 2.5712 1.0315 12 6 7.6279 2.1601 -0.6740 13 6 8.0285 0.6791 -0.7324 14 6 9.4492 0.5805 -1.2929 15 6 10.3638 1.5262 -0.5680 16 6 11.8492 1.2790 -0.6275 17 8 12.3248 1.5501 -1.9475 18 14 12.7139 2.3973 0.5861 19 6 9.9270 2.5570 0.1145 20 7 8.5720 2.8439 0.2221 21 6 2.7191 1.6643 -1.3166 22 1 -0.3635 0.5139 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 3.3789 1.8276 1.6583 26 1 3.9261 0.4143 0.6563 27 1 2.4677 3.9451 0.0044 28 1 4.0675 4.0765 0.7734 29 1 3.8513 5.5566 -1.0888 30 1 5.3104 1.7957 -1.8614 31 1 7.6819 2.5972 -1.6710 32 1 8.0013 0.2527 0.2703 33 1 7.3396 0.1388 -1.3817 34 1 9.4360 0.8330 -2.3532 35 1 9.8134 -0.4394 -1.1693 36 1 12.0549 0.2391 -0.3735 37 1 12.1749 2.4593 -2.2405 38 1 12.2052 2.1473 1.9586 39 1 14.1795 2.1628 0.5375 40 1 10.6406 3.2013 0.6065 41 1 8.2541 3.4844 0.8776 42 1 3.0693 0.7959 -1.8747 43 1 2.1626 2.3692 -1.9341 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_15413834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:50 Heat of formation + Delta-G solvation = -104.276072 kcal Electronic energy + Delta-G solvation = -25412.096428 eV Core-core repulsion = 21653.506615 eV Total energy + Delta-G solvation = -3758.589814 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.161 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.92168 -40.62615 -39.21339 -38.04448 -37.23875 -36.71838 -34.41815 -33.18939 -32.73887 -28.89113 -27.47870 -27.34135 -26.89730 -25.43659 -24.30942 -23.37797 -21.61150 -20.22664 -19.34183 -19.06699 -18.65864 -18.07560 -17.86016 -17.00005 -16.88771 -16.35313 -16.30182 -16.15965 -15.85940 -15.66136 -15.41793 -15.19040 -15.09999 -14.80118 -14.26650 -14.03413 -13.95997 -13.76779 -13.52260 -13.13924 -13.00591 -12.90199 -12.78871 -12.54118 -12.09637 -11.97903 -11.92323 -11.83212 -11.77671 -11.23981 -11.19140 -10.63043 -10.57995 -10.15768 -10.08686 -8.44383 -4.95668 1.37696 1.45223 1.52019 1.72289 1.85986 2.09982 2.59361 2.77283 2.89455 3.15171 3.45361 3.53721 3.59952 3.67686 3.79181 3.83491 3.88616 4.00251 4.08632 4.23372 4.30406 4.32823 4.37576 4.39894 4.49231 4.55494 4.61899 4.64287 4.70115 4.71938 4.74319 4.82128 4.91486 4.94479 5.00172 5.22195 5.29283 5.41818 5.57173 6.13484 6.24186 6.44078 6.50628 6.79121 6.85347 7.13732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.062 3.938 4 H 0.092 0.908 5 C -0.125 4.125 6 C 0.158 3.842 7 C 0.084 3.916 8 O -0.566 6.566 9 N -0.701 5.701 10 C 0.519 3.481 11 O -0.531 6.531 12 C 0.138 3.862 13 C -0.128 4.128 14 C -0.051 4.051 15 C -0.281 4.281 16 C -0.042 4.042 17 O -0.548 6.548 18 Si 0.665 3.335 19 C 0.145 3.855 20 N -0.731 5.731 21 C -0.151 4.151 22 H 0.043 0.957 23 H 0.088 0.912 24 H 0.044 0.956 25 H 0.083 0.917 26 H 0.100 0.900 27 H 0.057 0.943 28 H 0.063 0.937 29 H 0.383 0.617 30 H 0.405 0.595 31 H 0.092 0.908 32 H 0.075 0.925 33 H 0.078 0.922 34 H 0.070 0.930 35 H 0.071 0.929 36 H 0.104 0.896 37 H 0.375 0.625 38 H -0.260 1.260 39 H -0.258 1.258 40 H 0.133 0.867 41 H 0.409 0.591 42 H 0.101 0.899 43 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.556 3.626 -2.289 6.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.003 3.997 4 H 0.110 0.890 5 C -0.163 4.163 6 C 0.071 3.929 7 C 0.005 3.995 8 O -0.371 6.371 9 N -0.352 5.352 10 C 0.304 3.696 11 O -0.406 6.406 12 C 0.029 3.971 13 C -0.167 4.167 14 C -0.088 4.088 15 C -0.291 4.291 16 C -0.154 4.154 17 O -0.353 6.353 18 Si 0.568 3.432 19 C 0.025 3.975 20 N -0.364 5.364 21 C -0.189 4.189 22 H 0.062 0.938 23 H 0.106 0.894 24 H 0.062 0.938 25 H 0.102 0.898 26 H 0.118 0.882 27 H 0.075 0.925 28 H 0.081 0.919 29 H 0.230 0.770 30 H 0.240 0.760 31 H 0.110 0.890 32 H 0.094 0.906 33 H 0.097 0.903 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.121 0.879 37 H 0.221 0.779 38 H -0.185 1.185 39 H -0.184 1.184 40 H 0.150 0.850 41 H 0.245 0.755 42 H 0.119 0.881 43 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -3.798 2.456 -1.029 4.639 hybrid contribution -0.720 0.312 -0.009 0.785 sum -4.518 2.769 -1.037 5.400 Atomic orbital electron populations 1.22844 0.80695 1.03188 1.00132 1.87963 1.20038 1.26617 1.94509 1.23600 0.94044 0.85917 0.96135 0.89034 1.23518 0.94536 0.99881 0.98372 1.21404 0.81665 0.93056 0.96790 1.22242 0.98192 0.88924 0.90136 1.86441 1.85720 1.21542 1.43400 1.45632 1.04722 1.68922 1.15957 1.20544 0.86521 0.76221 0.86289 1.90706 1.86118 1.47260 1.16558 1.20981 0.86505 0.95157 0.94497 1.21891 0.98317 0.93503 1.03017 1.19926 0.91473 0.98606 0.98791 1.20954 0.96240 1.00255 1.11641 1.24719 0.93327 1.05663 0.91721 1.86474 1.82851 1.34681 1.31263 0.95375 0.79859 0.89254 0.78668 1.20298 0.84777 0.94936 0.97497 1.44266 1.03025 1.47955 1.41121 1.23881 0.96190 1.01130 0.97697 0.93819 0.89362 0.93783 0.89797 0.88169 0.92525 0.91903 0.77014 0.75992 0.89030 0.90648 0.90313 0.91206 0.91020 0.87882 0.77855 1.18521 1.18352 0.85033 0.75461 0.88103 0.89844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.48 10.71 -35.23 -0.38 -0.85 16 3 C 0.06 -0.03 3.94 -25.92 -0.10 -0.14 16 4 H 0.09 -0.19 7.42 -51.93 -0.39 -0.57 16 5 C -0.12 -0.05 6.40 -25.92 -0.17 -0.22 16 6 C 0.16 -0.08 0.91 -130.87 -0.12 -0.20 16 7 C 0.08 -0.06 6.17 37.16 0.23 0.17 16 8 O -0.57 0.33 13.39 -35.23 -0.47 -0.15 16 9 N -0.70 0.51 4.97 -46.72 -0.23 0.28 16 10 C 0.52 0.51 6.75 -10.98 -0.07 0.44 16 11 O -0.53 -2.16 14.62 5.55 0.08 -2.08 16 12 C 0.14 -0.05 3.36 -68.51 -0.23 -0.28 16 13 C -0.13 0.05 5.48 -26.43 -0.14 -0.09 16 14 C -0.05 -0.01 5.85 -28.10 -0.16 -0.17 16 15 C -0.28 -0.13 5.37 -101.34 -0.54 -0.67 16 16 C -0.04 -0.03 2.81 36.01 0.10 0.07 16 17 O -0.55 -0.64 12.88 -35.23 -0.45 -1.09 16 18 Si 0.67 -0.03 29.72 -169.99 -5.05 -5.08 16 19 C 0.15 -0.02 9.61 -16.08 -0.15 -0.18 16 20 N -0.73 -0.18 5.47 -55.34 -0.30 -0.49 16 21 C -0.15 0.19 7.21 -25.78 -0.19 0.01 16 22 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 23 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 24 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 26 H 0.10 0.16 8.14 -51.93 -0.42 -0.26 16 27 H 0.06 -0.14 7.36 -51.93 -0.38 -0.52 16 28 H 0.06 0.04 7.41 -51.93 -0.38 -0.34 16 29 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 30 H 0.40 -1.07 8.71 -40.82 -0.36 -1.42 16 31 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 36 H 0.10 0.17 7.96 -51.92 -0.41 -0.24 16 37 H 0.37 -1.03 8.70 45.56 0.40 -0.63 16 38 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 39 H -0.26 -0.90 7.11 56.52 0.40 -0.50 16 40 H 0.13 -0.27 4.50 -52.49 -0.24 -0.50 16 41 H 0.41 0.17 8.10 -40.82 -0.33 -0.17 16 42 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.08 -0.14 8.11 -51.93 -0.42 -0.56 16 LS Contribution 347.58 15.07 5.24 5.24 Total: 0.00 -8.42 347.58 -7.97 -16.39 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -5.94 Total: -11.97 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -0.46 Total: -0.19 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.53 Total: -0.21 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -1.22 Total: -4.17 kcal Atomic # 14 Polarization: -0.03 SS G_CDS: -5.05 Total: -5.08 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -8.42 -7.97 -16.39 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_15413834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.886 kcal (2) G-P(sol) polarization free energy of solvation -8.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds