Wall clock time and date at job start Sun Mar 7 2021 09:04:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42901 * 113.99995 * 2 1 4 4 H 1.08997 * 112.84654 * 341.19800 * 3 2 1 5 5 C 1.53781 * 113.61052 * 112.50385 * 3 2 1 6 6 C 1.53777 * 87.07881 * 139.98251 * 5 3 2 7 7 C 1.53001 * 113.61799 * 89.11647 * 6 5 3 8 8 O 1.42892 * 109.46931 * 82.73133 * 7 6 5 9 9 N 1.46507 * 113.68995 * 220.00612 * 6 5 3 10 10 C 1.34771 * 120.00152 * 173.16329 * 9 6 5 11 11 O 1.21282 * 120.00162 * 5.52843 * 10 9 6 12 12 C 1.50707 * 120.00083 * 185.52933 * 10 9 6 13 13 C 1.53038 * 109.32868 * 180.86524 * 12 10 9 14 14 C 1.53568 * 108.54697 * 190.15848 * 13 12 10 15 15 N 1.47032 * 107.64366 * 60.97444 * 14 13 12 16 16 C 1.38920 * 118.88503 * 316.31785 * 15 14 13 17 17 C 1.31116 * 121.84626 * 13.30521 * 16 15 14 18 18 C 1.50701 * 118.54586 * 179.61502 * 17 16 15 19 19 O 1.42901 * 109.47584 * 120.01574 * 18 17 16 20 20 Si 1.86304 * 109.47143 * 0.02562 * 18 17 16 21 21 C 1.53780 * 87.08436 * 334.56483 * 6 5 3 22 22 H 1.08999 * 109.47535 * 300.00036 * 1 2 3 23 23 H 1.09001 * 109.47317 * 59.99987 * 1 2 3 24 24 H 1.09000 * 109.47105 * 179.97438 * 1 2 3 25 25 H 1.08998 * 113.61775 * 25.42937 * 5 3 2 26 26 H 1.09001 * 113.61283 * 254.52958 * 5 3 2 27 27 H 1.08999 * 109.46555 * 322.73281 * 7 6 5 28 28 H 1.09001 * 109.47045 * 202.73037 * 7 6 5 29 29 H 0.96708 * 113.99646 * 180.02562 * 8 7 6 30 30 H 0.97005 * 119.99589 * 353.16936 * 9 6 5 31 31 H 1.09001 * 109.32172 * 300.34870 * 12 10 9 32 32 H 1.08998 * 109.62000 * 309.89122 * 13 12 10 33 33 H 1.08994 * 109.62378 * 70.44572 * 13 12 10 34 34 H 1.08991 * 109.83292 * 301.43132 * 14 13 12 35 35 H 1.08996 * 109.86700 * 180.52911 * 14 13 12 36 36 H 0.96998 * 120.55751 * 136.35228 * 15 14 13 37 37 H 1.07995 * 119.07811 * 193.31920 * 16 15 14 38 38 H 1.09004 * 109.47174 * 240.01834 * 18 17 16 39 39 H 0.96698 * 114.00096 * 179.97438 * 19 18 17 40 40 H 1.48503 * 109.99749 * 60.00300 * 20 18 17 41 41 H 1.48504 * 110.00039 * 181.31865 * 20 18 17 42 42 H 1.08998 * 113.61560 * 139.98254 * 21 6 5 43 43 H 1.09000 * 113.61622 * 270.80412 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 -0.3237 5 6 2.7535 1.6488 1.3018 6 6 3.8227 2.3181 0.4223 7 6 3.5413 3.7936 0.1314 8 8 3.9945 4.5900 1.2278 9 7 5.1942 2.0798 0.8790 10 6 6.2354 2.4895 0.1279 11 8 6.0397 3.1429 -0.8750 12 6 7.6430 2.1359 0.5340 13 6 8.6268 2.7379 -0.4717 14 6 10.0230 2.1618 -0.1941 15 7 9.9478 0.7046 -0.3750 16 6 8.8613 0.0181 0.1525 17 6 7.7879 0.6415 0.5749 18 6 6.6492 -0.1778 1.1256 19 8 6.4014 0.2012 2.4809 20 14 7.0951 -1.9854 1.0581 21 6 3.3756 1.3719 -0.7045 22 1 -0.3634 0.5138 0.8899 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 3.1166 0.7739 1.8410 26 1 2.2141 2.3476 1.9412 27 1 2.4697 3.9390 -0.0050 28 1 4.0669 4.0916 -0.7759 29 1 3.8475 5.5388 1.1119 30 1 5.3528 1.6270 1.7222 31 1 7.8465 2.5454 1.5235 32 1 8.3186 2.4795 -1.4848 33 1 8.6489 3.8217 -0.3583 34 1 10.3216 2.3925 0.8284 35 1 10.7439 2.5843 -0.8940 36 1 10.6453 0.2304 -0.8541 37 1 8.9020 -1.0592 0.2166 38 1 5.7536 -0.0019 0.5296 39 1 5.6791 -0.2864 2.8999 40 1 8.3146 -2.2382 1.8670 41 1 5.9678 -2.8061 1.5688 42 1 3.3384 1.8471 -1.6848 43 1 3.9098 0.4218 -0.7147 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_15608500.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:53 Heat of formation + Delta-G solvation = -93.913969 kcal Electronic energy + Delta-G solvation = -26798.241486 eV Core-core repulsion = 23040.101007 eV Total energy + Delta-G solvation = -3758.140479 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.161 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.86665 -40.52781 -38.88841 -37.93575 -37.70703 -36.54554 -34.07107 -33.06769 -32.79393 -28.67884 -27.34191 -27.18606 -26.82877 -25.81134 -23.88341 -23.02509 -21.39281 -20.04807 -19.07743 -18.73884 -18.56065 -18.46202 -17.97061 -17.57319 -16.87494 -16.55122 -16.14776 -15.96292 -15.63520 -15.42993 -15.17656 -14.93679 -14.80347 -14.62743 -14.41782 -13.74901 -13.69734 -13.63947 -13.57100 -13.38848 -13.01688 -12.81421 -12.58075 -12.39088 -12.15582 -11.86497 -11.75826 -11.61560 -11.60555 -11.34558 -11.04792 -10.51314 -10.48182 -10.17782 -9.66071 -8.42626 -4.94952 1.23697 1.37427 1.61109 1.95854 2.04988 2.36307 2.57373 2.90066 3.08763 3.32373 3.39391 3.57637 3.70395 3.75073 3.85733 3.97708 4.06266 4.23342 4.25784 4.35915 4.39791 4.42387 4.45021 4.49091 4.52793 4.66063 4.69130 4.69868 4.75672 4.80117 4.83493 4.94003 4.97968 5.02092 5.08697 5.25834 5.39230 5.47059 5.79660 6.19494 6.30122 6.42279 6.73413 6.83345 6.87926 7.59558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.374 6.374 3 C 0.063 3.937 4 H 0.092 0.908 5 C -0.152 4.152 6 C 0.157 3.843 7 C 0.084 3.916 8 O -0.565 6.565 9 N -0.704 5.704 10 C 0.536 3.464 11 O -0.544 6.544 12 C -0.038 4.038 13 C -0.119 4.119 14 C 0.119 3.881 15 N -0.747 5.747 16 C 0.156 3.844 17 C -0.233 4.233 18 C -0.065 4.065 19 O -0.539 6.539 20 Si 0.667 3.333 21 C -0.134 4.134 22 H 0.042 0.958 23 H 0.043 0.957 24 H 0.087 0.913 25 H 0.095 0.905 26 H 0.081 0.919 27 H 0.048 0.952 28 H 0.074 0.926 29 H 0.380 0.620 30 H 0.409 0.591 31 H 0.095 0.905 32 H 0.082 0.918 33 H 0.079 0.921 34 H 0.061 0.939 35 H 0.083 0.917 36 H 0.404 0.596 37 H 0.132 0.868 38 H 0.077 0.923 39 H 0.376 0.624 40 H -0.256 1.256 41 H -0.261 1.261 42 H 0.082 0.918 43 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.595 -1.095 -1.229 1.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.292 6.292 3 C 0.005 3.995 4 H 0.110 0.890 5 C -0.190 4.190 6 C 0.070 3.930 7 C 0.005 3.995 8 O -0.370 6.370 9 N -0.364 5.364 10 C 0.323 3.677 11 O -0.422 6.422 12 C -0.059 4.059 13 C -0.158 4.158 14 C -0.005 4.005 15 N -0.377 5.377 16 C 0.034 3.966 17 C -0.244 4.244 18 C -0.175 4.175 19 O -0.345 6.345 20 Si 0.569 3.431 21 C -0.173 4.173 22 H 0.061 0.939 23 H 0.062 0.938 24 H 0.106 0.894 25 H 0.114 0.886 26 H 0.100 0.900 27 H 0.066 0.934 28 H 0.092 0.908 29 H 0.226 0.774 30 H 0.252 0.748 31 H 0.112 0.888 32 H 0.100 0.900 33 H 0.098 0.902 34 H 0.079 0.921 35 H 0.102 0.898 36 H 0.238 0.762 37 H 0.149 0.851 38 H 0.095 0.905 39 H 0.224 0.776 40 H -0.181 1.181 41 H -0.186 1.186 42 H 0.101 0.899 43 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 0.174 -1.611 -1.312 2.085 hybrid contribution -0.911 0.634 1.106 1.567 sum -0.737 -0.977 -0.206 1.240 Atomic orbital electron populations 1.22836 0.80789 1.03089 1.00124 1.87948 1.19957 1.26767 1.94529 1.23572 0.93927 0.85771 0.96255 0.89035 1.23813 0.96602 1.00962 0.97633 1.21297 0.82408 0.93152 0.96165 1.22283 0.97486 0.89110 0.90637 1.86446 1.85659 1.21674 1.43193 1.46275 1.03883 1.60575 1.25654 1.20391 0.86614 0.77800 0.82940 1.90621 1.85948 1.38834 1.26771 1.19644 0.92144 0.93341 1.00748 1.21733 0.93629 1.00426 0.99981 1.21661 0.97308 0.80223 1.01329 1.44533 1.24059 1.07032 1.62074 1.20242 0.86857 0.95502 0.94021 1.19515 0.96120 0.93821 1.14943 1.24799 0.99996 1.08876 0.83872 1.86520 1.57626 1.64087 1.26289 0.95294 0.80825 0.75299 0.91711 1.23647 0.94861 1.00187 0.98594 0.93884 0.93791 0.89430 0.88610 0.90015 0.93380 0.90813 0.77356 0.74772 0.88765 0.89970 0.90228 0.92095 0.89850 0.76177 0.85092 0.90542 0.77594 1.18117 1.18619 0.89929 0.88180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.57 10.71 -35.23 -0.38 -0.95 16 3 C 0.06 0.01 3.96 -25.92 -0.10 -0.09 16 4 H 0.09 -0.10 7.39 -51.93 -0.38 -0.49 16 5 C -0.15 -0.03 7.17 -25.92 -0.19 -0.21 16 6 C 0.16 0.22 0.95 -131.00 -0.12 0.10 16 7 C 0.08 0.14 5.82 37.16 0.22 0.35 16 8 O -0.56 -1.30 13.41 -35.23 -0.47 -1.77 16 9 N -0.70 -1.47 3.30 -46.85 -0.15 -1.62 16 10 C 0.54 1.99 6.57 -10.98 -0.07 1.92 16 11 O -0.54 -3.38 13.83 5.56 0.08 -3.30 16 12 C -0.04 -0.08 2.63 -93.14 -0.24 -0.33 16 13 C -0.12 -0.15 4.92 -26.42 -0.13 -0.28 16 14 C 0.12 -0.10 7.16 -3.46 -0.02 -0.12 16 15 N -0.75 0.73 5.83 -60.67 -0.35 0.38 16 16 C 0.16 0.01 9.63 -16.08 -0.15 -0.15 16 17 C -0.23 -0.28 5.14 -101.34 -0.52 -0.80 16 18 C -0.07 -0.01 1.69 36.01 0.06 0.05 16 19 O -0.54 -0.11 10.38 -35.23 -0.37 -0.48 16 20 Si 0.67 -0.36 29.68 -169.99 -5.04 -5.41 16 21 C -0.13 -0.14 7.23 -25.92 -0.19 -0.32 16 22 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 25 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.08 0.01 8.10 -51.93 -0.42 -0.41 16 27 H 0.05 -0.02 7.34 -51.93 -0.38 -0.40 16 28 H 0.07 0.24 6.52 -51.93 -0.34 -0.10 16 29 H 0.38 -0.57 9.12 45.56 0.42 -0.16 16 30 H 0.41 0.57 5.03 -40.82 -0.21 0.36 16 31 H 0.09 0.25 8.14 -51.93 -0.42 -0.18 16 32 H 0.08 0.23 7.75 -51.93 -0.40 -0.18 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.40 -1.26 8.96 -40.82 -0.37 -1.63 16 37 H 0.13 -0.21 4.37 -52.49 -0.23 -0.44 16 38 H 0.08 0.01 5.69 -51.93 -0.30 -0.29 16 39 H 0.38 -1.18 8.74 45.56 0.40 -0.78 16 40 H -0.26 -0.58 7.11 56.52 0.40 -0.17 16 41 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 42 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 43 H 0.10 0.13 7.63 -51.93 -0.40 -0.27 16 LS Contribution 334.93 15.07 5.05 5.05 Total: 0.00 -8.20 334.93 -7.62 -15.83 By element: Atomic # 1 Polarization: -3.31 SS G_CDS: -5.60 Total: -8.91 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -0.37 Total: 1.19 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.51 Total: -1.25 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -1.14 Total: -6.50 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.04 Total: -5.41 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -8.20 -7.62 -15.83 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_15608500.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.087 kcal (2) G-P(sol) polarization free energy of solvation -8.203 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds