Wall clock time and date at job start Sun Mar 7 2021 09:05:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42903 * 114.00012 * 2 1 4 4 H 1.09001 * 112.84575 * 339.67150 * 3 2 1 5 5 C 1.53778 * 113.68745 * 110.93147 * 3 2 1 6 6 C 1.53781 * 87.07778 * 89.13228 * 5 3 2 7 7 C 1.52999 * 113.61713 * 139.97932 * 6 5 3 8 8 O 1.42902 * 109.47401 * 84.58811 * 7 6 5 9 9 N 1.46495 * 113.61369 * 270.87990 * 6 5 3 10 10 C 1.34780 * 120.00215 * 161.09563 * 9 6 5 11 11 O 1.21282 * 119.99728 * 4.99070 * 10 9 6 12 12 C 1.50700 * 119.99977 * 184.98843 * 10 9 6 13 13 C 1.53000 * 109.46970 * 179.97438 * 12 10 9 14 14 O 1.42901 * 109.47160 * 180.02562 * 13 12 10 15 15 C 1.35901 * 117.00080 * 180.02562 * 14 13 12 16 16 C 1.38708 * 120.05752 * 180.02562 * 15 14 13 17 17 C 1.38165 * 119.94693 * 180.02562 * 16 15 14 18 18 C 1.50701 * 119.97362 * 180.02562 * 17 16 15 19 19 O 1.42894 * 109.47037 * 299.99404 * 18 17 16 20 20 Si 1.86306 * 109.47190 * 179.97438 * 18 17 16 21 21 C 1.38244 * 120.05439 * 359.97438 * 17 16 15 22 22 C 1.38289 * 120.11069 * 359.97438 * 21 17 16 23 23 C 1.38117 * 120.05629 * 359.75920 * 22 21 17 24 24 C 1.53773 * 113.61586 * 208.46977 * 3 2 1 25 25 H 1.09005 * 109.47169 * 179.97438 * 1 2 3 26 26 H 1.09006 * 109.47632 * 299.99873 * 1 2 3 27 27 H 1.09003 * 109.47586 * 59.99926 * 1 2 3 28 28 H 1.09006 * 113.61416 * 203.67406 * 5 3 2 29 29 H 1.08993 * 113.62231 * 334.58138 * 5 3 2 30 30 H 1.08999 * 109.47617 * 204.58624 * 7 6 5 31 31 H 1.09002 * 109.47026 * 324.59360 * 7 6 5 32 32 H 0.96701 * 114.00435 * 180.02562 * 8 7 6 33 33 H 0.97009 * 120.00127 * 341.09942 * 9 6 5 34 34 H 1.08997 * 109.47704 * 299.99946 * 12 10 9 35 35 H 1.09005 * 109.47027 * 60.00777 * 12 10 9 36 36 H 1.09007 * 109.47370 * 300.00303 * 13 12 10 37 37 H 1.09004 * 109.47316 * 60.00303 * 13 12 10 38 38 H 1.08005 * 120.02790 * 0.02562 * 16 15 14 39 39 H 1.09002 * 109.47284 * 59.99811 * 18 17 16 40 40 H 0.96699 * 114.00430 * 180.02562 * 19 18 17 41 41 H 1.48503 * 109.99674 * 298.68136 * 20 18 17 42 42 H 1.48497 * 109.99888 * 59.99497 * 20 18 17 43 43 H 1.07998 * 119.94836 * 180.02562 * 21 17 16 44 44 H 1.07997 * 119.97109 * 180.02562 * 22 21 17 45 45 H 1.07998 * 120.02757 * 180.27929 * 23 22 21 46 46 H 1.08999 * 113.61318 * 25.35435 * 24 3 2 47 47 H 1.08998 * 113.61436 * 156.24929 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3218 2.0752 -0.3490 5 6 2.7211 1.6652 1.3153 6 6 3.9895 1.0427 0.7084 7 6 5.2664 1.8254 1.0211 8 8 5.7704 1.4246 2.2969 9 7 4.1219 -0.3925 0.9703 10 6 4.9438 -1.1433 0.2105 11 8 5.6415 -0.6170 -0.6304 12 6 4.9957 -2.6367 0.4057 13 6 5.9998 -3.2447 -0.5757 14 8 6.0486 -4.6609 -0.3910 15 6 6.8983 -5.3584 -1.1900 16 6 6.9959 -6.7363 -1.0650 17 6 7.8609 -7.4431 -1.8782 18 6 7.9670 -8.9403 -1.7433 19 8 8.3903 -9.2705 -0.4190 20 14 9.2083 -9.5882 -2.9722 21 6 8.6285 -6.7781 -2.8161 22 6 8.5323 -5.4044 -2.9434 23 6 7.6650 -4.6940 -2.1367 24 6 3.3923 1.3645 -0.6716 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 2.8015 2.7384 1.4888 29 1 2.3396 1.1231 2.1804 30 1 6.0144 1.6218 0.2548 31 1 5.0438 2.8923 1.0373 32 1 6.5808 1.8815 2.5609 33 1 3.6180 -0.8026 1.6907 34 1 5.3049 -2.8592 1.4269 35 1 4.0083 -3.0614 0.2243 36 1 5.6901 -3.0223 -1.5969 37 1 6.9873 -2.8201 -0.3948 38 1 6.3962 -7.2564 -0.3327 39 1 6.9943 -9.3924 -1.9372 40 1 8.4806 -10.2200 -0.2602 41 1 8.7630 -9.2791 -4.3548 42 1 10.5389 -8.9794 -2.7192 43 1 9.3038 -7.3323 -3.4511 44 1 9.1326 -4.8872 -3.6772 45 1 7.5869 -3.6218 -2.2396 46 1 3.5524 0.5794 -1.4106 47 1 3.6561 2.3553 -1.0414 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_4549614.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:08 Heat of formation + Delta-G solvation = -132.232477 kcal Electronic energy + Delta-G solvation = -29378.694729 eV Core-core repulsion = 25109.184073 eV Total energy + Delta-G solvation = -4269.510656 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.81766 -41.15609 -39.77858 -38.89131 -37.91026 -37.24495 -36.58608 -34.10022 -32.97261 -32.49849 -30.74232 -28.97732 -27.44381 -26.99416 -26.89634 -25.44071 -23.58910 -23.38999 -21.95517 -21.29581 -20.27492 -19.05699 -18.36682 -18.28079 -17.87524 -17.67232 -17.31298 -17.21797 -17.15989 -16.70903 -16.58670 -16.15243 -15.84592 -15.75240 -15.40045 -15.19388 -14.96907 -14.54471 -14.44070 -14.26068 -14.03553 -13.92938 -13.73560 -13.44240 -13.36297 -13.21583 -12.88297 -12.77972 -12.68486 -12.26281 -12.23492 -12.02432 -11.99693 -11.71825 -11.64812 -11.56429 -11.10219 -10.63623 -10.56127 -10.35715 -9.91517 -9.78235 -9.15035 -4.93205 0.29824 0.48720 1.30646 1.68421 1.71545 1.79092 2.02714 2.45879 2.64774 2.73291 3.01391 3.38453 3.42537 3.50382 3.61686 3.69407 3.85412 3.92389 3.95598 3.98292 4.03862 4.10727 4.27044 4.29929 4.31535 4.35976 4.36768 4.39124 4.43802 4.51572 4.54427 4.60658 4.64633 4.66993 4.71774 4.73320 4.73866 4.80746 4.96583 5.00246 5.05883 5.33788 5.45099 5.52538 5.60425 5.75353 6.14342 6.46233 6.57895 6.65518 6.65766 7.29960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.365 6.365 3 C 0.062 3.938 4 H 0.080 0.920 5 C -0.154 4.154 6 C 0.164 3.836 7 C 0.075 3.925 8 O -0.567 6.567 9 N -0.686 5.686 10 C 0.530 3.470 11 O -0.544 6.544 12 C -0.140 4.140 13 C 0.076 3.924 14 O -0.315 6.315 15 C 0.136 3.864 16 C -0.122 4.122 17 C -0.038 4.038 18 C -0.073 4.073 19 O -0.544 6.544 20 Si 0.687 3.313 21 C -0.164 4.164 22 C -0.072 4.072 23 C -0.203 4.203 24 C -0.137 4.137 25 H 0.088 0.912 26 H 0.043 0.957 27 H 0.043 0.957 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.061 0.939 31 H 0.053 0.947 32 H 0.379 0.621 33 H 0.406 0.594 34 H 0.105 0.895 35 H 0.107 0.893 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.136 0.864 39 H 0.077 0.923 40 H 0.383 0.617 41 H -0.255 1.255 42 H -0.251 1.251 43 H 0.119 0.881 44 H 0.130 0.870 45 H 0.134 0.866 46 H 0.088 0.912 47 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.488 0.260 0.923 3.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.283 6.283 3 C 0.004 3.996 4 H 0.098 0.902 5 C -0.192 4.192 6 C 0.077 3.923 7 C -0.004 4.004 8 O -0.372 6.372 9 N -0.337 5.337 10 C 0.317 3.683 11 O -0.421 6.421 12 C -0.180 4.180 13 C 0.001 3.999 14 O -0.229 6.229 15 C 0.091 3.909 16 C -0.141 4.141 17 C -0.038 4.038 18 C -0.183 4.183 19 O -0.351 6.351 20 Si 0.589 3.411 21 C -0.181 4.181 22 C -0.090 4.090 23 C -0.221 4.221 24 C -0.176 4.176 25 H 0.106 0.894 26 H 0.062 0.938 27 H 0.062 0.938 28 H 0.123 0.877 29 H 0.102 0.898 30 H 0.079 0.921 31 H 0.072 0.928 32 H 0.226 0.774 33 H 0.241 0.759 34 H 0.124 0.876 35 H 0.125 0.875 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.154 0.846 39 H 0.094 0.906 40 H 0.230 0.770 41 H -0.180 1.180 42 H -0.175 1.175 43 H 0.136 0.864 44 H 0.148 0.852 45 H 0.152 0.848 46 H 0.107 0.893 47 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -3.010 0.869 -0.139 3.136 hybrid contribution -0.299 1.116 0.419 1.229 sum -3.309 1.986 0.280 3.869 Atomic orbital electron populations 1.22851 0.80577 1.03089 1.00184 1.87904 1.19864 1.26033 1.94491 1.23069 0.94635 0.85751 0.96141 0.90194 1.23826 0.94824 1.01983 0.98595 1.21144 0.93274 0.81305 0.96566 1.22492 0.95540 0.96486 0.85884 1.86453 1.46323 1.68496 1.35975 1.45251 1.45824 1.07110 1.35513 1.20117 0.78983 0.88477 0.80762 1.90700 1.42041 1.74271 1.35099 1.21441 1.02205 0.92120 1.02247 1.22417 1.00000 0.77782 0.99726 1.85980 1.59082 1.20590 1.57231 1.18938 0.90182 0.91447 0.90370 1.20213 1.01640 0.90618 1.01623 1.19111 0.95620 0.93548 0.95525 1.24721 1.06311 0.94299 0.92994 1.86500 1.90483 1.29374 1.28696 0.95440 0.78726 0.90022 0.76958 1.20766 1.01434 0.95018 1.00906 1.20862 0.96852 0.93354 0.97896 1.21374 1.00662 1.00906 0.99200 1.23522 0.93624 1.03715 0.96712 0.89358 0.93826 0.93811 0.87667 0.89833 0.92088 0.92845 0.77375 0.75884 0.87628 0.87464 0.90994 0.91004 0.84626 0.90552 0.76977 1.18004 1.17520 0.86371 0.85222 0.84805 0.89318 0.87745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.36 -0.23 10.14 -35.23 -0.36 -0.59 16 3 C 0.06 -0.04 4.36 -25.92 -0.11 -0.15 16 4 H 0.08 -0.16 7.88 -51.93 -0.41 -0.57 16 5 C -0.15 0.19 7.20 -25.92 -0.19 0.00 16 6 C 0.16 0.08 0.81 -131.01 -0.11 -0.03 16 7 C 0.08 0.05 6.28 37.16 0.23 0.28 16 8 O -0.57 -0.65 13.38 -35.23 -0.47 -1.12 16 9 N -0.69 -0.59 4.37 -46.86 -0.20 -0.80 16 10 C 0.53 1.25 7.31 -10.98 -0.08 1.17 16 11 O -0.54 -2.87 14.10 5.56 0.08 -2.79 16 12 C -0.14 -0.08 6.07 -27.88 -0.17 -0.25 16 13 C 0.08 0.17 4.03 37.16 0.15 0.32 16 14 O -0.32 -1.21 10.14 -19.43 -0.20 -1.40 16 15 C 0.14 0.60 6.69 -39.22 -0.26 0.34 16 16 C -0.12 -0.53 9.55 -39.43 -0.38 -0.91 16 17 C -0.04 -0.15 5.42 -104.65 -0.57 -0.71 16 18 C -0.07 -0.08 2.81 36.01 0.10 0.03 16 19 O -0.54 -0.63 12.74 -35.23 -0.45 -1.08 16 20 Si 0.69 -0.18 29.79 -169.99 -5.06 -5.24 16 21 C -0.16 -0.62 8.67 -39.56 -0.34 -0.97 16 22 C -0.07 -0.23 10.04 -39.61 -0.40 -0.63 16 23 C -0.20 -0.72 9.04 -39.43 -0.36 -1.07 16 24 C -0.14 -0.04 6.82 -25.93 -0.18 -0.21 16 25 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 26 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.11 -0.27 7.93 -51.93 -0.41 -0.68 16 29 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 30 H 0.06 0.14 7.22 -51.93 -0.38 -0.24 16 31 H 0.05 -0.07 7.90 -51.93 -0.41 -0.48 16 32 H 0.38 -0.93 9.12 45.56 0.42 -0.52 16 33 H 0.41 -0.23 8.68 -40.82 -0.35 -0.58 16 34 H 0.11 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.11 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 0.17 7.61 -51.93 -0.40 -0.22 16 37 H 0.07 0.19 7.63 -51.93 -0.40 -0.21 16 38 H 0.14 0.48 8.06 -52.48 -0.42 0.06 16 39 H 0.08 -0.05 7.96 -51.93 -0.41 -0.47 16 40 H 0.38 -1.58 8.74 45.56 0.40 -1.18 16 41 H -0.25 -0.54 7.11 56.52 0.40 -0.13 16 42 H -0.25 -0.76 7.11 56.52 0.40 -0.35 16 43 H 0.12 0.35 4.87 -52.49 -0.26 0.10 16 44 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 45 H 0.13 0.30 6.30 -52.49 -0.33 -0.03 16 46 H 0.09 0.24 7.36 -51.93 -0.38 -0.14 16 47 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 LS Contribution 387.05 15.07 5.83 5.83 Total: 0.00 -9.87 387.05 -8.70 -18.57 By element: Atomic # 1 Polarization: -3.31 SS G_CDS: -6.32 Total: -9.63 kcal Atomic # 6 Polarization: -0.19 SS G_CDS: -1.55 Total: -1.75 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -0.20 Total: -0.80 kcal Atomic # 8 Polarization: -5.59 SS G_CDS: -1.40 Total: -6.99 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.06 Total: -5.24 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.87 -8.70 -18.57 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_4549614.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.658 kcal (2) G-P(sol) polarization free energy of solvation -9.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.704 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds