Wall clock time and date at job start Sun Mar 7 2021 09:05:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42900 * 114.00128 * 2 1 4 4 H 1.09006 * 112.90603 * 18.75471 * 3 2 1 5 5 C 1.53779 * 113.61631 * 149.99830 * 3 2 1 6 6 C 1.53784 * 87.07927 * 89.12002 * 5 3 2 7 7 C 1.52995 * 113.61417 * 140.06782 * 6 5 3 8 8 O 1.42905 * 109.47210 * 186.55698 * 7 6 5 9 9 N 1.46495 * 113.61520 * 270.88714 * 6 5 3 10 10 C 1.34774 * 120.00321 * 304.26311 * 9 6 5 11 11 O 1.21283 * 119.99844 * 354.63485 * 10 9 6 12 12 C 1.50701 * 120.00210 * 174.90766 * 10 9 6 13 13 O 1.42901 * 109.47025 * 179.72732 * 12 10 9 14 14 C 1.35903 * 117.00156 * 180.02562 * 13 12 10 15 15 C 1.38714 * 120.05813 * 179.72380 * 14 13 12 16 16 N 1.47998 * 120.02532 * 0.02562 * 15 14 13 17 17 O 1.21809 * 120.00035 * 180.02562 * 16 15 14 18 18 O 1.21800 * 120.00467 * 359.97438 * 16 15 14 19 19 C 1.38167 * 119.94160 * 179.74596 * 15 14 13 20 20 C 1.38238 * 120.05554 * 0.52670 * 19 15 14 21 21 C 1.50699 * 119.94512 * 179.76820 * 20 19 15 22 22 O 1.42903 * 109.47151 * 299.98012 * 21 20 19 23 23 Si 1.86297 * 109.47624 * 179.97438 * 21 20 19 24 24 C 1.38281 * 120.11462 * 359.74963 * 20 19 15 25 25 C 1.38130 * 120.05699 * 359.97296 * 24 20 19 26 26 C 1.53779 * 113.61968 * 247.49998 * 3 2 1 27 27 H 1.09003 * 109.46934 * 299.99569 * 1 2 3 28 28 H 1.09002 * 109.47169 * 59.99035 * 1 2 3 29 29 H 1.08998 * 109.47093 * 179.97438 * 1 2 3 30 30 H 1.09004 * 113.61249 * 334.57753 * 5 3 2 31 31 H 1.08995 * 113.69758 * 203.68248 * 5 3 2 32 32 H 1.09002 * 109.47389 * 306.55215 * 7 6 5 33 33 H 1.09002 * 109.47524 * 66.55694 * 7 6 5 34 34 H 0.96700 * 114.00157 * 180.02562 * 8 7 6 35 35 H 0.97008 * 120.00063 * 124.26577 * 9 6 5 36 36 H 1.09003 * 109.47053 * 299.72542 * 12 10 9 37 37 H 1.09000 * 109.47030 * 59.73026 * 12 10 9 38 38 H 1.08001 * 119.96559 * 180.27609 * 19 15 14 39 39 H 1.09007 * 109.47115 * 59.97607 * 21 20 19 40 40 H 0.96701 * 114.00176 * 300.00107 * 22 21 20 41 41 H 1.48495 * 110.00533 * 180.02562 * 23 21 20 42 42 H 1.48503 * 109.99561 * 301.31909 * 23 21 20 43 43 H 1.08001 * 119.97801 * 180.02562 * 24 20 19 44 44 H 1.08002 * 120.03007 * 180.02562 * 25 24 20 45 45 H 1.09004 * 113.61449 * 156.33453 * 26 3 2 46 46 H 1.08998 * 113.61141 * 25.43723 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0798 0.3228 5 6 3.3756 1.3719 0.7045 6 6 4.0062 1.0331 -0.6565 7 6 5.2920 1.8098 -0.9466 8 8 5.7171 1.5446 -2.2849 9 7 4.1437 -0.4053 -0.8979 10 6 4.8164 -1.1747 -0.0194 11 8 5.3905 -0.6637 0.9189 12 6 4.8606 -2.6694 -0.2064 13 8 5.6337 -3.2579 0.8415 14 6 5.7740 -4.6095 0.8205 15 6 6.5163 -5.2464 1.8041 16 7 7.1562 -4.4546 2.8783 17 8 7.8083 -5.0143 3.7415 18 8 7.0315 -3.2432 2.8987 19 6 6.6530 -6.6211 1.7833 20 6 6.0598 -7.3608 0.7772 21 6 6.2149 -8.8596 0.7540 22 8 7.6010 -9.1936 0.6572 23 14 5.3043 -9.5556 -0.7147 24 6 5.3241 -6.7277 -0.2077 25 6 5.1796 -5.3541 -0.1883 26 6 2.7535 1.6490 -1.3017 27 1 -0.3633 0.5138 0.8901 28 1 -0.3633 0.5140 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 3.5171 0.5956 1.4566 31 1 3.6323 2.3664 1.0693 32 1 5.1060 2.8774 -0.8294 33 1 6.0700 1.4978 -0.2497 34 1 6.5289 2.0049 -2.5382 35 1 3.7505 -0.8040 -1.6900 36 1 3.8469 -3.0692 -0.1785 37 1 5.3166 -2.9019 -1.1687 38 1 7.2272 -7.1178 2.5514 39 1 5.8026 -9.2817 1.6706 40 1 8.0340 -8.8496 -0.1360 41 1 5.4490 -11.0331 -0.7486 42 1 3.8673 -9.1880 -0.6420 43 1 4.8612 -7.3077 -0.9924 44 1 4.6045 -4.8602 -0.9575 45 1 2.8389 2.7199 -1.4861 46 1 2.3926 1.0966 -2.1693 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_4549638.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:31 Heat of formation + Delta-G solvation = -124.913793 kcal Electronic energy + Delta-G solvation = -34531.109281 eV Core-core repulsion = 29586.437170 eV Total energy + Delta-G solvation = -4944.672111 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.144 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.30529 -41.99167 -41.49268 -40.03496 -39.13507 -37.89055 -37.60017 -37.35393 -36.53268 -34.23019 -33.46406 -32.24450 -30.06796 -28.67343 -27.83242 -27.30138 -26.86702 -26.55051 -24.33028 -23.43070 -22.81154 -21.81625 -20.60940 -20.26303 -19.78617 -19.13744 -18.65179 -18.57629 -18.22914 -18.08806 -17.74123 -17.42735 -17.09554 -16.87154 -16.60100 -16.32486 -16.11371 -16.03437 -15.73266 -15.66973 -15.34099 -14.92650 -14.74237 -14.62655 -14.02283 -13.91882 -13.75852 -13.63653 -13.33797 -13.28569 -13.19945 -12.73698 -12.71562 -12.38112 -12.28497 -12.26421 -12.21196 -12.19428 -11.95204 -11.89787 -11.57478 -11.12430 -10.85275 -10.68361 -10.57078 -10.53356 -10.01784 -9.80085 -4.99904 -1.32350 -0.25708 0.14600 0.34101 1.20198 1.26867 1.52342 1.63738 2.00985 2.04132 2.30804 2.70146 3.04859 3.10545 3.23666 3.37638 3.47925 3.49878 3.56010 3.62599 3.69818 3.77094 3.79198 3.90530 4.00245 4.14095 4.27717 4.34923 4.35538 4.43111 4.49899 4.51316 4.56135 4.62056 4.63309 4.63978 4.71715 4.82164 4.84247 4.89667 5.02320 5.05347 5.06212 5.18250 5.53777 5.74616 6.26800 6.41419 6.50103 6.72993 6.79867 7.20457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.384 6.384 3 C 0.063 3.937 4 H 0.094 0.906 5 C -0.146 4.146 6 C 0.155 3.845 7 C 0.077 3.923 8 O -0.579 6.579 9 N -0.675 5.675 10 C 0.513 3.487 11 O -0.559 6.559 12 C 0.028 3.972 13 O -0.289 6.289 14 C 0.192 3.808 15 C -0.104 4.104 16 N 0.035 4.965 17 O -0.201 6.201 18 O -0.175 6.175 19 C -0.003 4.003 20 C -0.150 4.150 21 C -0.081 4.081 22 O -0.557 6.557 23 Si 0.798 3.202 24 C -0.004 4.004 25 C -0.190 4.190 26 C -0.133 4.133 27 H 0.042 0.958 28 H 0.055 0.945 29 H 0.093 0.907 30 H 0.058 0.942 31 H 0.116 0.884 32 H 0.076 0.924 33 H 0.029 0.971 34 H 0.394 0.606 35 H 0.417 0.583 36 H 0.135 0.865 37 H 0.140 0.860 38 H 0.152 0.848 39 H 0.110 0.890 40 H 0.398 0.602 41 H -0.304 1.304 42 H -0.265 1.265 43 H 0.189 0.811 44 H 0.202 0.798 45 H 0.122 0.878 46 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.912 0.119 -13.414 15.574 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.302 6.302 3 C 0.005 3.995 4 H 0.112 0.888 5 C -0.184 4.184 6 C 0.068 3.932 7 C -0.002 4.002 8 O -0.386 6.386 9 N -0.329 5.329 10 C 0.299 3.701 11 O -0.436 6.436 12 C -0.049 4.049 13 O -0.199 6.199 14 C 0.142 3.858 15 C -0.189 4.189 16 N 0.545 4.455 17 O -0.408 6.408 18 O -0.388 6.388 19 C -0.022 4.022 20 C -0.151 4.151 21 C -0.189 4.189 22 O -0.365 6.365 23 Si 0.701 3.299 24 C -0.022 4.022 25 C -0.209 4.209 26 C -0.171 4.171 27 H 0.061 0.939 28 H 0.073 0.927 29 H 0.112 0.888 30 H 0.077 0.923 31 H 0.134 0.866 32 H 0.094 0.906 33 H 0.048 0.952 34 H 0.244 0.756 35 H 0.255 0.745 36 H 0.153 0.847 37 H 0.157 0.843 38 H 0.169 0.831 39 H 0.128 0.872 40 H 0.248 0.752 41 H -0.232 1.232 42 H -0.191 1.191 43 H 0.205 0.795 44 H 0.219 0.781 45 H 0.140 0.860 46 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -8.903 -1.065 -12.773 15.606 hybrid contribution 0.790 0.801 1.434 1.822 sum -8.113 -0.264 -11.339 13.945 Atomic orbital electron populations 1.22955 0.79647 1.03648 1.00746 1.87854 1.20958 1.26830 1.94605 1.23135 0.94210 0.85786 0.96363 0.88773 1.23586 0.95063 1.03467 0.96325 1.21298 0.93981 0.80627 0.97288 1.22444 0.95424 0.98739 0.83643 1.86376 1.48249 1.74502 1.29510 1.45045 1.55375 1.06847 1.25593 1.20316 0.78484 0.88917 0.82422 1.90803 1.44588 1.75362 1.32849 1.23037 0.99264 0.90795 0.91843 1.86467 1.67740 1.16410 1.49268 1.19002 0.90943 0.83755 0.92063 1.20849 1.11300 0.92541 0.94242 1.43881 0.98763 1.01520 1.01340 1.94498 1.39868 1.73447 1.33035 1.94682 1.65981 0.96382 1.81804 1.20842 0.94617 0.88422 0.98286 1.20459 1.01350 0.97577 0.95737 1.25467 0.89714 0.91144 1.12598 1.86527 1.21479 1.78420 1.50123 0.93786 0.77297 0.77776 0.81007 1.21710 0.90932 0.93957 0.95551 1.21788 1.04717 0.94782 0.99587 1.23711 0.92589 1.02915 0.97899 0.93899 0.92651 0.88813 0.92340 0.86576 0.90628 0.95229 0.75637 0.74507 0.84709 0.84272 0.83085 0.87214 0.75181 1.23233 1.19071 0.79473 0.78141 0.86002 0.89221 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.13 10.85 113.37 1.23 1.10 16 2 O -0.38 0.15 10.13 -148.98 -1.51 -1.36 16 3 C 0.06 -0.15 4.37 31.12 0.14 -0.02 16 4 H 0.09 -0.51 7.87 -2.38 -0.02 -0.53 16 5 C -0.15 -0.28 6.71 31.12 0.21 -0.08 16 6 C 0.16 0.00 0.76 4.13 0.00 0.00 16 7 C 0.08 0.05 6.42 71.98 0.46 0.52 16 8 O -0.58 0.26 13.54 -148.98 -2.02 -1.75 16 9 N -0.68 0.52 4.50 -420.56 -1.89 -1.37 16 10 C 0.51 2.51 7.41 87.66 0.65 3.16 16 11 O -0.56 -9.11 14.42 16.00 0.23 -8.88 16 12 C 0.03 -0.09 5.22 71.24 0.37 0.28 16 13 O -0.29 -2.05 7.68 -63.43 -0.49 -2.54 16 14 C 0.19 0.51 6.67 22.51 0.15 0.66 16 15 C -0.10 -0.88 6.87 36.48 0.25 -0.63 16 16 N 0.03 0.63 4.45 -46.25 -0.21 0.42 16 17 O -0.20 -3.93 18.45 18.87 0.35 -3.58 16 18 O -0.18 -4.03 17.24 25.61 0.44 -3.59 16 19 C 0.00 -0.01 9.11 22.25 0.20 0.20 16 20 C -0.15 0.69 5.39 -19.85 -0.11 0.58 16 21 C -0.08 0.44 2.82 71.24 0.20 0.64 16 22 O -0.56 1.65 12.77 -148.98 -1.90 -0.25 16 23 Si 0.80 -7.55 29.78 68.60 2.04 -5.50 16 24 C 0.00 0.04 8.66 22.25 0.19 0.24 16 25 C -0.19 1.63 9.04 22.37 0.20 1.83 16 26 C -0.13 0.67 7.23 31.12 0.22 0.89 16 27 H 0.04 -0.20 8.14 -2.39 -0.02 -0.22 16 28 H 0.05 -0.40 8.14 -2.39 -0.02 -0.42 16 29 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 30 H 0.06 0.57 6.72 -2.39 -0.02 0.56 16 31 H 0.12 -0.15 8.10 -2.39 -0.02 -0.17 16 32 H 0.08 -0.27 8.09 -2.39 -0.02 -0.29 16 33 H 0.03 0.20 7.52 -2.39 -0.02 0.18 16 34 H 0.39 -2.85 9.12 -74.06 -0.68 -3.52 16 35 H 0.42 -2.80 8.75 -92.70 -0.81 -3.61 16 36 H 0.14 -1.39 7.66 -2.39 -0.02 -1.41 16 37 H 0.14 -1.61 7.66 -2.39 -0.02 -1.63 16 38 H 0.15 0.72 7.61 -2.91 -0.02 0.70 16 39 H 0.11 -0.39 7.96 -2.38 -0.02 -0.41 16 40 H 0.40 -4.62 8.70 -74.06 -0.64 -5.26 16 41 H -0.30 -0.03 7.11 99.48 0.71 0.68 16 42 H -0.26 1.93 7.11 99.48 0.71 2.64 16 43 H 0.19 -3.37 4.88 -2.91 -0.01 -3.38 16 44 H 0.20 -3.55 6.30 -2.91 -0.02 -3.57 16 45 H 0.12 -0.98 8.06 -2.38 -0.02 -1.00 16 46 H 0.09 -0.53 8.13 -2.39 -0.02 -0.55 16 Total: 0.00 -39.30 392.26 -1.59 -40.88 By element: Atomic # 1 Polarization: -20.84 SS G_CDS: -1.02 Total: -21.85 kcal Atomic # 6 Polarization: 5.00 SS G_CDS: 4.38 Total: 9.38 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -2.10 Total: -0.95 kcal Atomic # 8 Polarization: -17.06 SS G_CDS: -4.89 Total: -21.96 kcal Atomic # 14 Polarization: -7.55 SS G_CDS: 2.04 Total: -5.50 kcal Total: -39.30 -1.59 -40.88 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_4549638.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.029 kcal (2) G-P(sol) polarization free energy of solvation -39.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds