Wall clock time and date at job start Sun Mar 7 2021 09:05:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42901 * 113.99655 * 2 1 4 4 H 1.08992 * 112.85296 * 341.19433 * 3 2 1 5 5 C 1.53776 * 113.68964 * 112.46827 * 3 2 1 6 6 C 1.53785 * 87.08306 * 139.98839 * 5 3 2 7 7 C 1.52997 * 113.69066 * 89.12613 * 6 5 3 8 8 O 1.42900 * 109.47009 * 76.36267 * 7 6 5 9 9 N 1.46503 * 113.61475 * 220.01873 * 6 5 3 10 10 C 1.34773 * 119.99952 * 162.40344 * 9 6 5 11 11 O 1.21555 * 119.99889 * 354.96027 * 10 9 6 12 12 C 1.47839 * 120.00305 * 174.97030 * 10 9 6 13 13 C 1.39553 * 120.14898 * 180.02562 * 12 10 9 14 14 C 1.50704 * 120.07331 * 359.97438 * 13 12 10 15 15 O 1.42892 * 109.47384 * 180.02562 * 14 13 12 16 16 C 1.35900 * 117.00311 * 180.02562 * 15 14 13 17 17 C 1.38708 * 120.05965 * 179.97438 * 16 15 14 18 18 C 1.38167 * 119.94664 * 180.02562 * 17 16 15 19 19 C 1.50700 * 119.97476 * 180.02562 * 18 17 16 20 20 O 1.42906 * 109.47024 * 64.99840 * 19 18 17 21 21 Si 1.86296 * 109.47289 * 184.99914 * 19 18 17 22 22 C 1.38244 * 120.05431 * 0.02562 * 18 17 16 23 23 C 1.38289 * 120.11096 * 0.02562 * 22 18 17 24 24 C 1.38122 * 120.05472 * 359.68592 * 23 22 18 25 25 C 1.37974 * 119.85723 * 179.97438 * 13 12 10 26 26 C 1.38336 * 120.14559 * 0.02562 * 25 13 12 27 27 C 1.38387 * 120.29090 * 359.70994 * 26 25 13 28 28 C 1.37934 * 120.14164 * 0.54573 * 27 26 25 29 29 C 1.53781 * 87.08131 * 334.56626 * 6 5 3 30 30 H 1.08998 * 109.47296 * 60.00317 * 1 2 3 31 31 H 1.09001 * 109.47173 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47325 * 299.99471 * 1 2 3 33 33 H 1.09006 * 113.61624 * 25.43994 * 5 3 2 34 34 H 1.09005 * 113.61440 * 254.53787 * 5 3 2 35 35 H 1.08997 * 109.47599 * 196.36804 * 7 6 5 36 36 H 1.09001 * 109.47147 * 316.36499 * 7 6 5 37 37 H 0.96708 * 113.99953 * 179.97438 * 8 7 6 38 38 H 0.96995 * 119.99952 * 342.39704 * 9 6 5 39 39 H 1.09003 * 109.46938 * 300.00718 * 14 13 12 40 40 H 1.08999 * 109.46788 * 60.00148 * 14 13 12 41 41 H 1.08000 * 120.02737 * 359.97438 * 17 16 15 42 42 H 1.08995 * 109.47132 * 305.00202 * 19 18 17 43 43 H 0.96703 * 113.99981 * 59.99998 * 20 19 18 44 44 H 1.48495 * 109.99939 * 58.68009 * 21 19 18 45 45 H 1.48500 * 110.00233 * 180.02562 * 21 19 18 46 46 H 1.07999 * 119.94586 * 180.02562 * 22 18 17 47 47 H 1.08003 * 119.97000 * 179.97438 * 23 22 18 48 48 H 1.08001 * 120.02763 * 180.31955 * 24 23 22 49 49 H 1.07998 * 119.93066 * 180.02562 * 25 13 12 50 50 H 1.07992 * 119.85971 * 179.97438 * 26 25 13 51 51 H 1.07996 * 119.93383 * 180.27782 * 27 26 25 52 52 H 1.08002 * 120.07196 * 179.74863 * 28 27 26 53 53 H 1.08994 * 113.61207 * 139.97941 * 29 6 5 54 54 H 1.09000 * 113.61482 * 270.88457 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7531 1.6511 1.3013 6 6 3.8220 2.3200 0.4209 7 6 3.5414 3.7950 0.1272 8 8 3.8571 4.5786 1.2797 9 7 5.1929 2.0819 0.8794 10 6 6.2289 2.2895 0.0428 11 8 6.0227 2.5854 -1.1181 12 6 7.6160 2.1572 0.5367 13 6 8.6910 2.3720 -0.3269 14 6 8.4411 2.7393 -1.7670 15 8 9.6907 2.9043 -2.4402 16 6 9.6429 3.2396 -3.7563 17 6 10.8182 3.4162 -4.4714 18 6 10.7670 3.7577 -5.8092 19 6 12.0435 3.9491 -6.5869 20 8 12.7433 2.7057 -6.6674 21 14 11.6406 4.5473 -8.3046 22 6 9.5455 3.9238 -6.4350 23 6 8.3723 3.7494 -5.7241 24 6 8.4182 3.4022 -4.3880 25 6 9.9831 2.2474 0.1406 26 6 10.2143 1.9098 1.4621 27 6 9.1529 1.7008 2.3251 28 6 7.8563 1.8170 1.8691 29 6 3.3755 1.3720 -0.7046 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3634 0.5137 0.8900 33 1 3.1169 0.7771 1.8417 34 1 2.2132 2.3504 1.9398 35 1 4.1543 4.1212 -0.7130 36 1 2.4877 3.9221 -0.1210 37 1 3.7036 5.5265 1.1650 38 1 5.3549 1.7750 1.7852 39 1 7.8702 1.9464 -2.2503 40 1 7.8780 3.6715 -1.8117 41 1 11.7727 3.2878 -3.9826 42 1 12.6689 4.6860 -6.0830 43 1 12.2453 2.0018 -7.1052 44 1 10.8849 5.8236 -8.2337 45 1 12.8911 4.7394 -9.0820 46 1 9.5075 4.1903 -7.4809 47 1 7.4193 3.8801 -6.2151 48 1 7.5017 3.2610 -3.8344 49 1 10.8160 2.4138 -0.5266 50 1 11.2275 1.8131 1.8230 51 1 9.3400 1.4418 3.3567 52 1 7.0287 1.6496 2.5426 53 1 3.3381 1.8459 -1.6854 54 1 3.9094 0.4217 -0.7126 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_4557126.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:38 Heat of formation + Delta-G solvation = -101.892031 kcal Electronic energy + Delta-G solvation = -37910.986271 eV Core-core repulsion = 32974.349094 eV Total energy + Delta-G solvation = -4936.637177 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -42.06307 -41.39214 -40.62794 -39.31239 -38.89701 -37.97126 -37.26774 -36.69558 -34.62174 -33.31736 -32.49821 -32.03472 -31.02559 -28.73335 -27.87365 -27.30627 -26.87182 -26.66434 -25.26586 -24.02040 -23.58482 -22.97127 -21.81060 -21.54058 -20.13412 -19.14702 -19.05386 -18.58480 -18.01765 -17.90140 -17.40470 -17.19387 -17.10786 -16.94876 -16.66266 -16.38422 -16.20449 -16.11677 -16.01417 -15.82895 -15.60522 -15.36728 -15.22986 -15.02365 -14.86624 -14.55556 -14.37765 -14.20872 -14.03009 -13.74698 -13.68605 -13.50378 -13.34596 -13.09835 -12.96212 -12.80778 -12.70440 -12.55620 -12.41348 -12.23830 -12.21130 -12.03962 -11.89310 -11.75520 -11.68349 -11.18564 -10.69506 -10.52744 -10.49694 -10.29056 -10.00871 -9.97960 -9.83595 -9.29351 -4.98914 -0.27069 0.17084 0.24549 0.36215 1.29128 1.65458 1.75987 1.91408 1.95296 2.04618 2.63741 2.71848 2.84639 2.95628 3.24355 3.45348 3.53097 3.56997 3.59553 3.65840 3.66845 3.79838 3.83215 3.96182 4.02406 4.08593 4.14757 4.17793 4.21302 4.24505 4.31787 4.35209 4.39273 4.42711 4.46268 4.50012 4.54059 4.55369 4.62506 4.64026 4.66078 4.72669 4.84152 4.88160 4.90538 4.91561 4.94189 5.00960 5.17392 5.22869 5.32267 5.35802 5.40812 5.41020 5.43601 5.70008 5.80485 6.22535 6.31336 6.41687 6.74483 6.74713 7.07738 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.398 6.398 3 C 0.064 3.936 4 H 0.110 0.890 5 C -0.140 4.140 6 C 0.154 3.846 7 C 0.086 3.914 8 O -0.580 6.580 9 N -0.693 5.693 10 C 0.560 3.440 11 O -0.560 6.560 12 C -0.147 4.147 13 C -0.052 4.052 14 C 0.120 3.880 15 O -0.329 6.329 16 C 0.116 3.884 17 C -0.142 4.142 18 C -0.084 4.084 19 C -0.080 4.080 20 O -0.555 6.555 21 Si 0.788 3.212 22 C -0.154 4.154 23 C -0.074 4.074 24 C -0.210 4.210 25 C -0.123 4.123 26 C -0.090 4.090 27 C -0.124 4.124 28 C -0.079 4.079 29 C -0.127 4.127 30 H 0.052 0.948 31 H 0.091 0.909 32 H 0.053 0.947 33 H 0.099 0.901 34 H 0.093 0.907 35 H 0.046 0.954 36 H 0.077 0.923 37 H 0.397 0.603 38 H 0.412 0.588 39 H 0.079 0.921 40 H 0.077 0.923 41 H 0.125 0.875 42 H 0.105 0.895 43 H 0.396 0.604 44 H -0.284 1.284 45 H -0.297 1.297 46 H 0.153 0.847 47 H 0.154 0.846 48 H 0.133 0.867 49 H 0.133 0.867 50 H 0.152 0.848 51 H 0.160 0.840 52 H 0.154 0.846 53 H 0.078 0.922 54 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.133 -0.604 2.510 6.654 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.316 6.316 3 C 0.006 3.994 4 H 0.127 0.873 5 C -0.178 4.178 6 C 0.068 3.932 7 C 0.007 3.993 8 O -0.388 6.388 9 N -0.344 5.344 10 C 0.349 3.651 11 O -0.441 6.441 12 C -0.150 4.150 13 C -0.053 4.053 14 C 0.046 3.954 15 O -0.243 6.243 16 C 0.071 3.929 17 C -0.161 4.161 18 C -0.085 4.085 19 C -0.189 4.189 20 O -0.363 6.363 21 Si 0.693 3.307 22 C -0.171 4.171 23 C -0.092 4.092 24 C -0.228 4.228 25 C -0.141 4.141 26 C -0.108 4.108 27 C -0.141 4.141 28 C -0.098 4.098 29 C -0.166 4.166 30 H 0.070 0.930 31 H 0.110 0.890 32 H 0.072 0.928 33 H 0.117 0.883 34 H 0.111 0.889 35 H 0.064 0.936 36 H 0.095 0.905 37 H 0.247 0.753 38 H 0.249 0.751 39 H 0.097 0.903 40 H 0.095 0.905 41 H 0.143 0.857 42 H 0.123 0.877 43 H 0.246 0.754 44 H -0.211 1.211 45 H -0.225 1.225 46 H 0.170 0.830 47 H 0.172 0.828 48 H 0.151 0.849 49 H 0.151 0.849 50 H 0.170 0.830 51 H 0.178 0.822 52 H 0.171 0.829 53 H 0.097 0.903 54 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -5.349 -0.200 1.817 5.653 hybrid contribution -0.109 0.790 0.853 1.168 sum -5.458 0.590 2.671 6.105 Atomic orbital electron populations 1.22987 0.79557 1.03797 1.01019 1.87928 1.21436 1.27637 1.94634 1.23672 0.93751 0.85847 0.96118 0.87272 1.23729 0.95653 1.00966 0.97465 1.21440 0.81186 0.93397 0.97223 1.22190 1.00051 0.88998 0.88015 1.86395 1.90521 1.23876 1.37962 1.45591 1.04740 1.67662 1.16440 1.18378 0.85136 0.76261 0.85323 1.90703 1.86063 1.49288 1.18041 1.19701 0.91812 1.07926 0.95585 1.19706 0.93774 0.98229 0.93553 1.21486 0.82909 1.01819 0.89183 1.85931 1.33353 1.84412 1.20621 1.19168 0.94668 0.96021 0.83037 1.20316 0.96436 1.05290 0.94077 1.20252 0.95944 0.98837 0.93459 1.25344 0.92376 0.90837 1.10306 1.86472 1.45096 1.21520 1.83236 0.93541 0.79628 0.82714 0.74847 1.21170 0.91499 1.03765 1.00681 1.21249 0.99640 0.95450 0.92814 1.21548 0.96752 1.07123 0.97412 1.21122 0.96026 1.00016 0.96952 1.21754 1.01173 0.95278 0.92595 1.21553 0.91693 0.99345 1.01550 1.21564 0.98925 0.96088 0.93206 1.23469 0.95489 0.99256 0.98386 0.92963 0.89004 0.92828 0.88259 0.88889 0.93605 0.90496 0.75318 0.75053 0.90331 0.90537 0.85718 0.87737 0.75442 1.21098 1.22521 0.83022 0.82801 0.84886 0.84907 0.83049 0.82225 0.82863 0.90328 0.89807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -1.07 10.72 -148.98 -1.60 -2.66 16 3 C 0.06 -0.07 3.96 31.12 0.12 0.05 16 4 H 0.11 -0.54 7.34 -2.39 -0.02 -0.55 16 5 C -0.14 0.33 7.22 31.12 0.22 0.55 16 6 C 0.15 0.01 0.85 4.13 0.00 0.02 16 7 C 0.09 -0.05 6.20 71.98 0.45 0.39 16 8 O -0.58 0.26 13.53 -148.98 -2.02 -1.75 16 9 N -0.69 -0.58 5.07 -423.37 -2.15 -2.73 16 10 C 0.56 3.14 7.41 86.79 0.64 3.79 16 11 O -0.56 -5.56 11.82 -3.89 -0.05 -5.60 16 12 C -0.15 -0.67 5.87 -20.09 -0.12 -0.78 16 13 C -0.05 -0.36 5.91 -19.61 -0.12 -0.48 16 14 C 0.12 1.04 3.38 71.24 0.24 1.28 16 15 O -0.33 -3.33 8.62 -92.42 -0.80 -4.13 16 16 C 0.12 1.06 6.69 22.51 0.15 1.21 16 17 C -0.14 -1.13 9.62 22.37 0.22 -0.92 16 18 C -0.08 -0.35 5.35 -19.88 -0.11 -0.45 16 19 C -0.08 -0.18 2.80 71.24 0.20 0.02 16 20 O -0.56 -1.68 12.83 -148.98 -1.91 -3.59 16 21 Si 0.79 -0.72 29.80 68.60 2.04 1.32 16 22 C -0.15 -0.20 8.67 22.28 0.19 0.00 16 23 C -0.07 -0.17 10.04 22.25 0.22 0.06 16 24 C -0.21 -1.35 9.04 22.37 0.20 -1.15 16 25 C -0.12 -0.60 9.37 22.23 0.21 -0.39 16 26 C -0.09 0.00 10.04 22.33 0.22 0.22 16 27 C -0.12 0.29 10.03 22.23 0.22 0.51 16 28 C -0.08 0.08 9.54 22.53 0.21 0.29 16 29 C -0.13 -0.23 6.40 31.12 0.20 -0.03 16 30 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 31 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 32 H 0.05 -0.27 8.14 -2.39 -0.02 -0.29 16 33 H 0.10 -0.21 8.14 -2.38 -0.02 -0.23 16 34 H 0.09 -0.35 8.10 -2.38 -0.02 -0.37 16 35 H 0.05 0.15 7.20 -2.39 -0.02 0.13 16 36 H 0.08 -0.38 7.32 -2.39 -0.02 -0.40 16 37 H 0.40 -3.05 9.12 -74.05 -0.68 -3.73 16 38 H 0.41 -1.41 6.76 -92.71 -0.63 -2.04 16 39 H 0.08 0.78 6.85 -2.39 -0.02 0.77 16 40 H 0.08 0.77 6.87 -2.39 -0.02 0.75 16 41 H 0.12 1.06 8.06 -2.91 -0.02 1.03 16 42 H 0.11 0.39 7.96 -2.39 -0.02 0.37 16 43 H 0.40 -2.06 8.70 -74.06 -0.64 -2.70 16 44 H -0.28 -1.02 7.11 99.48 0.71 -0.31 16 45 H -0.30 -1.84 7.11 99.48 0.71 -1.13 16 46 H 0.15 -0.65 4.90 -2.91 -0.01 -0.67 16 47 H 0.15 -0.47 8.06 -2.91 -0.02 -0.50 16 48 H 0.13 0.84 6.30 -2.91 -0.02 0.82 16 49 H 0.13 0.72 7.00 -2.91 -0.02 0.70 16 50 H 0.15 -0.71 8.06 -2.91 -0.02 -0.73 16 51 H 0.16 -1.28 8.06 -2.91 -0.02 -1.31 16 52 H 0.15 -1.05 6.42 -2.91 -0.02 -1.06 16 53 H 0.08 0.21 8.10 -2.39 -0.02 0.19 16 54 H 0.08 0.43 8.14 -2.39 -0.02 0.41 16 Total: 0.00 -22.69 437.72 -2.58 -25.27 By element: Atomic # 1 Polarization: -10.55 SS G_CDS: -0.94 Total: -11.49 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: 4.82 Total: 5.35 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -2.15 Total: -2.73 kcal Atomic # 8 Polarization: -11.37 SS G_CDS: -6.37 Total: -17.74 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: 2.04 Total: 1.32 kcal Total: -22.69 -2.58 -25.27 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_4557126.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.619 kcal (2) G-P(sol) polarization free energy of solvation -22.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds