Wall clock time and date at job start Sun Mar 7 2021 09:05:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35974 * 116.99953 * 2 1 4 4 C 1.38676 * 120.00014 * 180.02562 * 3 2 1 5 5 C 1.38159 * 119.99839 * 179.74642 * 4 3 2 6 6 C 1.50706 * 120.00146 * 180.24787 * 5 4 3 7 7 O 1.42897 * 109.46839 * 105.25596 * 6 5 4 8 8 Si 1.86299 * 109.47014 * 345.25899 * 6 5 4 9 9 C 1.38676 * 120.00107 * 0.50697 * 5 4 3 10 10 O 1.35982 * 119.99933 * 179.74098 * 9 5 4 11 11 C 1.42900 * 116.99722 * 179.72727 * 10 9 5 12 12 C 1.50702 * 109.47015 * 180.02562 * 11 10 9 13 13 O 1.21278 * 119.99889 * 359.97438 * 12 11 10 14 14 N 1.34781 * 119.99862 * 179.97438 * 12 11 10 15 15 C 1.46492 * 119.99665 * 184.98983 * 14 12 11 16 16 C 1.53002 * 112.90897 * 292.34752 * 15 14 12 17 17 O 1.42901 * 109.47156 * 313.33904 * 16 15 14 18 18 C 1.53785 * 113.61843 * 63.60347 * 15 14 12 19 19 C 1.53777 * 87.17280 * 89.15650 * 18 15 14 20 20 H 1.08997 * 113.61306 * 139.94168 * 19 18 15 21 21 O 1.42903 * 113.61460 * 270.84477 * 19 18 15 22 22 C 1.42900 * 113.99988 * 210.00631 * 21 19 18 23 23 C 1.53775 * 87.08258 * 25.39342 * 19 18 15 24 24 C 1.38715 * 119.99564 * 359.47188 * 9 5 4 25 25 C 1.38102 * 120.00558 * 0.27444 * 24 9 5 26 26 H 1.08999 * 109.47483 * 60.00444 * 1 2 3 27 27 H 1.09004 * 109.47322 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.47501 * 299.99608 * 1 2 3 29 29 H 1.07994 * 120.00111 * 0.02562 * 4 3 2 30 30 H 1.08991 * 109.47308 * 225.25847 * 6 5 4 31 31 H 0.96705 * 114.00171 * 299.99769 * 7 6 5 32 32 H 1.48494 * 110.00231 * 179.97438 * 8 6 5 33 33 H 1.48500 * 110.00138 * 301.31662 * 8 6 5 34 34 H 1.09001 * 109.47458 * 60.00482 * 11 10 9 35 35 H 1.08998 * 109.47503 * 299.99924 * 11 10 9 36 36 H 0.96997 * 120.00001 * 4.99308 * 14 12 11 37 37 H 1.09002 * 109.46944 * 73.33831 * 16 15 14 38 38 H 1.09002 * 109.47262 * 193.34171 * 16 15 14 39 39 H 0.96698 * 114.00314 * 179.97438 * 17 16 15 40 40 H 1.09001 * 113.61216 * 334.56316 * 18 15 14 41 41 H 1.08995 * 113.61194 * 203.74796 * 18 15 14 42 42 H 1.09002 * 109.47075 * 179.97438 * 22 21 19 43 43 H 1.09003 * 109.46782 * 299.99687 * 22 21 19 44 44 H 1.08996 * 109.47631 * 59.99223 * 22 21 19 45 45 H 1.08996 * 113.62029 * 89.11902 * 23 19 18 46 46 H 1.09005 * 113.61254 * 219.93390 * 23 19 18 47 47 H 1.08006 * 119.99866 * 180.25678 * 24 9 5 48 48 H 1.08003 * 120.00321 * 179.97438 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4311 1.2841 -0.0005 5 6 4.0583 2.5151 -0.0058 6 6 5.5633 2.5941 -0.0121 7 8 6.0151 2.9701 -1.3145 8 14 6.2742 0.9313 0.4358 9 6 3.3031 3.6782 0.0000 10 8 3.9204 4.8898 0.0001 11 6 3.0804 6.0458 0.0003 12 6 3.9346 7.2874 -0.0003 13 8 5.1436 7.1916 -0.0002 14 7 3.3549 8.5042 -0.0008 15 6 4.1810 9.7089 -0.1116 16 6 5.0597 9.9438 1.1187 17 8 4.2759 9.7800 2.3022 18 6 4.9443 9.8123 -1.4427 19 6 3.7131 10.5426 -2.0044 20 1 3.9619 11.3819 -2.6537 21 8 2.7393 9.6667 -2.5759 22 6 1.9870 10.2502 -3.6416 23 6 3.3960 10.9560 -0.5576 24 6 1.9178 3.6055 0.0001 25 6 1.2908 2.3750 0.0001 26 1 -0.3634 0.5137 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 4.0193 0.3784 -0.0014 30 1 5.8912 3.3371 0.7148 31 1 5.7589 2.3526 -2.0133 32 1 7.7577 0.9957 0.4326 33 1 5.7864 0.5143 1.7749 34 1 2.4512 6.0377 0.8903 35 1 2.4511 6.0379 -0.8897 36 1 2.3909 8.5821 0.0723 37 1 5.8788 9.2246 1.1228 38 1 5.4646 10.9554 1.0882 39 1 4.7697 9.9142 3.1227 40 1 5.1325 8.8477 -1.9140 41 1 5.8354 10.4375 -1.3875 42 1 1.2704 9.5221 -4.0216 43 1 1.4542 11.1267 -3.2728 44 1 2.6629 10.5469 -4.4436 45 1 3.8634 11.8944 -0.2591 46 1 2.3341 10.9162 -0.3148 47 1 1.3295 4.5113 0.0005 48 1 0.2122 2.3185 0.0006 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_4974302.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:46 Heat of formation + Delta-G solvation = -155.846802 kcal Electronic energy + Delta-G solvation = -32683.989949 eV Core-core repulsion = 28094.773107 eV Total energy + Delta-G solvation = -4589.216842 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.165 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.86546 -41.50319 -40.17797 -39.30089 -38.09779 -37.72416 -36.76818 -36.53563 -34.03108 -32.71048 -30.99209 -29.62744 -28.58524 -27.96817 -27.40028 -26.90970 -26.48741 -24.04140 -23.18764 -22.33127 -21.63451 -20.28469 -19.46849 -18.65060 -18.44558 -18.23080 -17.71128 -17.56349 -17.26499 -17.05237 -16.74108 -16.66137 -16.58166 -16.15411 -15.95890 -15.78366 -15.59016 -15.36805 -15.08139 -14.85957 -14.65911 -14.50261 -14.11734 -13.91980 -13.74178 -13.53951 -13.45054 -13.36728 -13.27327 -12.94492 -12.78383 -12.50870 -12.25082 -12.20143 -11.99609 -11.88090 -11.70398 -11.53731 -11.38884 -11.02962 -10.61633 -10.47000 -10.19570 -10.04128 -9.90395 -8.70350 -4.88425 0.13350 0.45830 1.44474 1.57867 1.73096 1.80042 2.13250 2.30920 2.53263 2.63793 2.73823 3.03494 3.39381 3.50845 3.55779 3.61345 3.70635 3.80121 3.84798 3.95003 4.03164 4.07695 4.10198 4.13876 4.21112 4.21701 4.28892 4.36829 4.38198 4.40452 4.42863 4.53849 4.55404 4.61370 4.65207 4.66065 4.71087 4.74375 4.76779 4.98868 5.05007 5.09185 5.21638 5.27056 5.48735 5.60635 6.15658 6.25209 6.45702 6.59799 6.67246 6.82502 7.33823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.097 3.903 4 C -0.107 4.107 5 C -0.110 4.110 6 C -0.055 4.055 7 O -0.529 6.529 8 Si 0.681 3.319 9 C 0.119 3.881 10 O -0.277 6.277 11 C 0.041 3.959 12 C 0.525 3.475 13 O -0.512 6.512 14 N -0.687 5.687 15 C 0.168 3.832 16 C 0.074 3.926 17 O -0.568 6.568 18 C -0.139 4.139 19 C 0.063 3.937 20 H 0.081 0.919 21 O -0.365 6.365 22 C 0.030 3.970 23 C -0.153 4.153 24 C -0.171 4.171 25 C -0.161 4.161 26 H 0.056 0.944 27 H 0.102 0.898 28 H 0.055 0.945 29 H 0.144 0.856 30 H 0.117 0.883 31 H 0.374 0.626 32 H -0.253 1.253 33 H -0.256 1.256 34 H 0.089 0.911 35 H 0.093 0.907 36 H 0.404 0.596 37 H 0.062 0.938 38 H 0.054 0.946 39 H 0.379 0.621 40 H 0.090 0.910 41 H 0.105 0.895 42 H 0.087 0.913 43 H 0.043 0.957 44 H 0.044 0.956 45 H 0.106 0.894 46 H 0.083 0.917 47 H 0.133 0.867 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.018 2.397 -2.019 6.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.052 3.948 4 C -0.125 4.125 5 C -0.111 4.111 6 C -0.166 4.166 7 O -0.334 6.334 8 Si 0.583 3.417 9 C 0.073 3.927 10 O -0.189 6.189 11 C -0.038 4.038 12 C 0.309 3.691 13 O -0.386 6.386 14 N -0.340 5.340 15 C 0.081 3.919 16 C -0.005 4.005 17 O -0.373 6.373 18 C -0.178 4.178 19 C 0.005 3.995 20 H 0.099 0.901 21 O -0.283 6.283 22 C -0.067 4.067 23 C -0.190 4.190 24 C -0.190 4.190 25 C -0.180 4.180 26 H 0.074 0.926 27 H 0.120 0.880 28 H 0.073 0.927 29 H 0.161 0.839 30 H 0.134 0.866 31 H 0.220 0.780 32 H -0.177 1.177 33 H -0.181 1.181 34 H 0.107 0.893 35 H 0.111 0.889 36 H 0.239 0.761 37 H 0.080 0.920 38 H 0.073 0.927 39 H 0.226 0.774 40 H 0.108 0.892 41 H 0.123 0.877 42 H 0.106 0.894 43 H 0.061 0.939 44 H 0.062 0.938 45 H 0.124 0.876 46 H 0.102 0.898 47 H 0.151 0.849 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.588 1.906 -1.513 5.193 hybrid contribution -0.991 1.316 0.550 1.737 sum -5.579 3.222 -0.962 6.514 Atomic orbital electron populations 1.23085 0.78155 1.04284 1.01322 1.86097 1.21468 1.26246 1.89057 1.18764 0.91887 0.84511 0.99620 1.20044 0.91689 0.96587 1.04208 1.19482 0.96680 0.89976 1.04975 1.24930 0.90934 1.11233 0.89497 1.86610 1.77987 1.53028 1.15737 0.95117 0.80570 0.80250 0.85797 1.18649 0.90482 0.85061 0.98507 1.86243 1.33320 1.10763 1.88554 1.22429 0.93256 0.84459 1.03640 1.19839 0.88752 0.83866 0.76601 1.90749 1.14040 1.86470 1.47375 1.45092 1.10262 1.03672 1.75011 1.21161 0.92209 0.85308 0.93265 1.22507 0.93601 0.99862 0.84529 1.86439 1.40410 1.94592 1.15857 1.23550 0.96685 1.03043 0.94482 1.23067 0.89831 0.92932 0.93717 0.90106 1.87900 1.50904 1.38827 1.50704 1.22849 0.95504 0.99087 0.89256 1.23846 1.01964 0.97208 0.96030 1.21076 0.93031 0.98700 1.06149 1.21083 1.00263 0.91522 1.05096 0.92570 0.87964 0.92656 0.83858 0.86588 0.78005 1.17749 1.18063 0.89290 0.88927 0.76099 0.91997 0.92740 0.77367 0.89175 0.87676 0.89416 0.93853 0.93767 0.87618 0.89845 0.84913 0.84797 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.47 10.50 -19.66 -0.21 -0.67 16 3 C 0.10 0.17 6.69 -39.24 -0.26 -0.09 16 4 C -0.11 -0.18 8.59 -39.45 -0.34 -0.52 16 5 C -0.11 -0.32 5.27 -104.49 -0.55 -0.87 16 6 C -0.06 -0.17 2.37 36.01 0.09 -0.09 16 7 O -0.53 -1.95 12.88 -35.23 -0.45 -2.40 16 8 Si 0.68 0.85 29.91 -169.99 -5.08 -4.24 16 9 C 0.12 0.39 6.66 -39.24 -0.26 0.13 16 10 O -0.28 -1.31 9.00 -39.59 -0.36 -1.67 16 11 C 0.04 0.06 5.22 36.01 0.19 0.25 16 12 C 0.52 1.92 7.39 -10.98 -0.08 1.84 16 13 O -0.51 -3.97 14.61 -14.35 -0.21 -4.17 16 14 N -0.69 -0.82 4.38 -46.77 -0.20 -1.03 16 15 C 0.17 0.14 0.81 -130.91 -0.11 0.04 16 16 C 0.07 0.08 6.28 37.16 0.23 0.31 16 17 O -0.57 -0.81 13.38 -35.23 -0.47 -1.28 16 18 C -0.14 -0.12 6.81 -25.92 -0.18 -0.29 16 19 C 0.06 -0.03 4.37 -25.92 -0.11 -0.15 16 20 H 0.08 -0.16 7.87 -51.93 -0.41 -0.56 16 21 O -0.37 -0.24 10.14 -35.23 -0.36 -0.60 16 22 C 0.03 -0.05 10.85 101.05 1.10 1.05 16 23 C -0.15 0.18 7.21 -25.83 -0.19 -0.01 16 24 C -0.17 -0.19 9.03 -39.45 -0.36 -0.54 16 25 C -0.16 -0.11 9.03 -39.45 -0.36 -0.47 16 26 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 27 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 28 H 0.05 -0.14 7.66 -51.93 -0.40 -0.54 16 29 H 0.14 -0.03 5.12 -52.49 -0.27 -0.30 16 30 H 0.12 0.58 7.82 -51.93 -0.41 0.17 16 31 H 0.37 -0.30 8.70 45.56 0.40 0.10 16 32 H -0.25 -1.07 7.11 56.52 0.40 -0.67 16 33 H -0.26 -0.90 7.11 56.52 0.40 -0.50 16 34 H 0.09 -0.08 7.66 -51.93 -0.40 -0.47 16 35 H 0.09 -0.06 7.66 -51.93 -0.40 -0.46 16 36 H 0.40 -0.33 8.68 -40.82 -0.35 -0.69 16 37 H 0.06 0.20 7.22 -51.93 -0.38 -0.18 16 38 H 0.05 -0.06 7.90 -51.93 -0.41 -0.47 16 39 H 0.38 -0.81 9.12 45.56 0.42 -0.39 16 40 H 0.09 0.33 7.36 -51.93 -0.38 -0.05 16 41 H 0.10 -0.09 8.10 -51.93 -0.42 -0.51 16 42 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 43 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 45 H 0.11 -0.27 7.93 -51.93 -0.41 -0.68 16 46 H 0.08 -0.09 8.10 -51.93 -0.42 -0.51 16 47 H 0.13 -0.18 6.29 -52.48 -0.33 -0.51 16 48 H 0.13 -0.21 6.29 -52.48 -0.33 -0.54 16 LS Contribution 395.15 15.07 5.95 5.95 Total: 0.00 -11.56 395.15 -7.77 -19.33 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -6.19 Total: -10.77 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -0.20 Total: 1.54 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -0.20 Total: -1.03 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -2.05 Total: -10.80 kcal Atomic # 14 Polarization: 0.85 SS G_CDS: -5.08 Total: -4.24 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -11.56 -7.77 -19.33 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_4974302.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.512 kcal (2) G-P(sol) polarization free energy of solvation -11.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.335 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds