Wall clock time and date at job start Sun Mar 7 2021 09:05:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35974 * 116.99953 * 2 1 4 4 C 1.38676 * 120.00014 * 180.02562 * 3 2 1 5 5 C 1.38159 * 119.99839 * 179.74642 * 4 3 2 6 6 C 1.50706 * 120.00146 * 180.24787 * 5 4 3 7 7 O 1.42897 * 109.46839 * 105.25596 * 6 5 4 8 8 Si 1.86299 * 109.47014 * 345.25899 * 6 5 4 9 9 C 1.38676 * 120.00107 * 0.50697 * 5 4 3 10 10 O 1.35982 * 119.99933 * 179.74098 * 9 5 4 11 11 C 1.42900 * 116.99722 * 179.72727 * 10 9 5 12 12 C 1.50702 * 109.47015 * 180.02562 * 11 10 9 13 13 O 1.21278 * 119.99889 * 359.97438 * 12 11 10 14 14 N 1.34781 * 119.99862 * 179.97438 * 12 11 10 15 15 C 1.46492 * 119.99665 * 184.98983 * 14 12 11 16 16 C 1.53002 * 112.90897 * 292.34752 * 15 14 12 17 17 O 1.42901 * 109.47156 * 313.33904 * 16 15 14 18 18 C 1.53785 * 113.61843 * 63.60347 * 15 14 12 19 19 C 1.53777 * 87.17280 * 89.15650 * 18 15 14 20 20 H 1.08997 * 113.61306 * 139.94168 * 19 18 15 21 21 O 1.42903 * 113.61460 * 270.84477 * 19 18 15 22 22 C 1.42900 * 113.99988 * 210.00631 * 21 19 18 23 23 C 1.53775 * 87.08258 * 25.39342 * 19 18 15 24 24 C 1.38715 * 119.99564 * 359.47188 * 9 5 4 25 25 C 1.38102 * 120.00558 * 0.27444 * 24 9 5 26 26 H 1.08999 * 109.47483 * 60.00444 * 1 2 3 27 27 H 1.09004 * 109.47322 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.47501 * 299.99608 * 1 2 3 29 29 H 1.07994 * 120.00111 * 0.02562 * 4 3 2 30 30 H 1.08991 * 109.47308 * 225.25847 * 6 5 4 31 31 H 0.96705 * 114.00171 * 299.99769 * 7 6 5 32 32 H 1.48494 * 110.00231 * 179.97438 * 8 6 5 33 33 H 1.48500 * 110.00138 * 301.31662 * 8 6 5 34 34 H 1.09001 * 109.47458 * 60.00482 * 11 10 9 35 35 H 1.08998 * 109.47503 * 299.99924 * 11 10 9 36 36 H 0.96997 * 120.00001 * 4.99308 * 14 12 11 37 37 H 1.09002 * 109.46944 * 73.33831 * 16 15 14 38 38 H 1.09002 * 109.47262 * 193.34171 * 16 15 14 39 39 H 0.96698 * 114.00314 * 179.97438 * 17 16 15 40 40 H 1.09001 * 113.61216 * 334.56316 * 18 15 14 41 41 H 1.08995 * 113.61194 * 203.74796 * 18 15 14 42 42 H 1.09002 * 109.47075 * 179.97438 * 22 21 19 43 43 H 1.09003 * 109.46782 * 299.99687 * 22 21 19 44 44 H 1.08996 * 109.47631 * 59.99223 * 22 21 19 45 45 H 1.08996 * 113.62029 * 89.11902 * 23 19 18 46 46 H 1.09005 * 113.61254 * 219.93390 * 23 19 18 47 47 H 1.08006 * 119.99866 * 180.25678 * 24 9 5 48 48 H 1.08003 * 120.00321 * 179.97438 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4311 1.2841 -0.0005 5 6 4.0583 2.5151 -0.0058 6 6 5.5633 2.5941 -0.0121 7 8 6.0151 2.9701 -1.3145 8 14 6.2742 0.9313 0.4358 9 6 3.3031 3.6782 0.0000 10 8 3.9204 4.8898 0.0001 11 6 3.0804 6.0458 0.0003 12 6 3.9346 7.2874 -0.0003 13 8 5.1436 7.1916 -0.0002 14 7 3.3549 8.5042 -0.0008 15 6 4.1810 9.7089 -0.1116 16 6 5.0597 9.9438 1.1187 17 8 4.2759 9.7800 2.3022 18 6 4.9443 9.8123 -1.4427 19 6 3.7131 10.5426 -2.0044 20 1 3.9619 11.3819 -2.6537 21 8 2.7393 9.6667 -2.5759 22 6 1.9870 10.2502 -3.6416 23 6 3.3960 10.9560 -0.5576 24 6 1.9178 3.6055 0.0001 25 6 1.2908 2.3750 0.0001 26 1 -0.3634 0.5137 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 4.0193 0.3784 -0.0014 30 1 5.8912 3.3371 0.7148 31 1 5.7589 2.3526 -2.0133 32 1 7.7577 0.9957 0.4326 33 1 5.7864 0.5143 1.7749 34 1 2.4512 6.0377 0.8903 35 1 2.4511 6.0379 -0.8897 36 1 2.3909 8.5821 0.0723 37 1 5.8788 9.2246 1.1228 38 1 5.4646 10.9554 1.0882 39 1 4.7697 9.9142 3.1227 40 1 5.1325 8.8477 -1.9140 41 1 5.8354 10.4375 -1.3875 42 1 1.2704 9.5221 -4.0216 43 1 1.4542 11.1267 -3.2728 44 1 2.6629 10.5469 -4.4436 45 1 3.8634 11.8944 -0.2591 46 1 2.3341 10.9162 -0.3148 47 1 1.3295 4.5113 0.0005 48 1 0.2122 2.3185 0.0006 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_4974302.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:45 Heat of formation + Delta-G solvation = -162.992594 kcal Electronic energy + Delta-G solvation = -32684.299814 eV Core-core repulsion = 28094.773107 eV Total energy + Delta-G solvation = -4589.526707 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.165 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.97213 -41.56968 -40.26222 -39.43790 -38.23284 -37.84740 -36.90830 -36.58757 -34.21418 -32.81454 -31.05453 -29.69202 -28.60689 -27.91993 -27.30930 -26.88862 -26.63124 -24.13336 -23.22019 -22.43204 -21.73982 -20.39566 -19.58549 -18.72802 -18.57236 -18.29673 -17.74072 -17.70038 -17.36671 -17.17713 -16.81996 -16.64921 -16.57864 -16.13793 -16.09282 -15.86910 -15.69185 -15.51786 -15.23108 -14.95030 -14.73511 -14.56685 -14.29148 -14.09227 -13.70720 -13.52870 -13.47502 -13.36001 -13.28855 -12.99893 -12.76391 -12.51298 -12.34099 -12.21223 -12.09438 -11.96985 -11.83474 -11.56564 -11.42983 -11.18452 -10.66490 -10.55794 -10.41360 -10.12916 -10.05108 -8.80610 -5.04789 0.05436 0.34784 1.25869 1.46551 1.51249 1.61747 1.92384 2.34457 2.53551 2.55563 2.72164 3.04425 3.42199 3.45382 3.50178 3.57395 3.68982 3.74837 3.76699 3.90580 4.04320 4.08691 4.11300 4.12752 4.25193 4.32531 4.39449 4.40783 4.44771 4.45674 4.49115 4.55477 4.59948 4.61579 4.67020 4.68374 4.79649 4.80091 4.88186 4.96721 4.97900 5.01228 5.14756 5.20907 5.41775 5.51627 6.17577 6.25800 6.42458 6.49971 6.74722 6.79345 7.16701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.330 6.330 3 C 0.089 3.911 4 C -0.114 4.114 5 C -0.124 4.124 6 C -0.069 4.069 7 O -0.552 6.552 8 Si 0.786 3.214 9 C 0.095 3.905 10 O -0.309 6.309 11 C 0.040 3.960 12 C 0.518 3.482 13 O -0.564 6.564 14 N -0.675 5.675 15 C 0.152 3.848 16 C 0.076 3.924 17 O -0.581 6.581 18 C -0.145 4.145 19 C 0.065 3.935 20 H 0.099 0.901 21 O -0.386 6.386 22 C 0.026 3.974 23 C -0.137 4.137 24 C -0.167 4.167 25 C -0.158 4.158 26 H 0.067 0.933 27 H 0.115 0.885 28 H 0.064 0.936 29 H 0.158 0.842 30 H 0.087 0.913 31 H 0.391 0.609 32 H -0.295 1.295 33 H -0.283 1.283 34 H 0.114 0.886 35 H 0.115 0.885 36 H 0.415 0.585 37 H 0.031 0.969 38 H 0.079 0.921 39 H 0.393 0.607 40 H 0.054 0.946 41 H 0.119 0.881 42 H 0.092 0.908 43 H 0.055 0.945 44 H 0.046 0.954 45 H 0.125 0.875 46 H 0.087 0.913 47 H 0.158 0.842 48 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.393 2.916 -2.258 9.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.245 6.245 3 C 0.044 3.956 4 C -0.132 4.132 5 C -0.125 4.125 6 C -0.178 4.178 7 O -0.359 6.359 8 Si 0.691 3.309 9 C 0.050 3.950 10 O -0.222 6.222 11 C -0.038 4.038 12 C 0.304 3.696 13 O -0.442 6.442 14 N -0.328 5.328 15 C 0.065 3.935 16 C -0.003 4.003 17 O -0.389 6.389 18 C -0.183 4.183 19 C 0.007 3.993 20 H 0.116 0.884 21 O -0.305 6.305 22 C -0.070 4.070 23 C -0.174 4.174 24 C -0.186 4.186 25 C -0.177 4.177 26 H 0.086 0.914 27 H 0.134 0.866 28 H 0.082 0.918 29 H 0.175 0.825 30 H 0.104 0.896 31 H 0.240 0.760 32 H -0.223 1.223 33 H -0.210 1.210 34 H 0.132 0.868 35 H 0.133 0.867 36 H 0.251 0.749 37 H 0.050 0.950 38 H 0.097 0.903 39 H 0.242 0.758 40 H 0.073 0.927 41 H 0.137 0.863 42 H 0.111 0.889 43 H 0.073 0.927 44 H 0.064 0.936 45 H 0.144 0.856 46 H 0.106 0.894 47 H 0.175 0.825 48 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -7.031 2.455 -1.769 7.654 hybrid contribution -0.285 1.182 0.630 1.369 sum -7.316 3.637 -1.139 8.249 Atomic orbital electron populations 1.23347 0.76482 1.05605 1.02288 1.86079 1.23283 1.26115 1.88979 1.18937 0.92036 0.85173 0.99441 1.20176 0.92292 0.96549 1.04199 1.19521 0.96324 0.90667 1.05996 1.25140 0.91930 1.11880 0.88803 1.86552 1.78357 1.54437 1.16595 0.93959 0.76424 0.77464 0.83092 1.18931 0.91628 0.84661 0.99765 1.86201 1.35091 1.11883 1.89038 1.22603 0.92762 0.82670 1.05768 1.20332 0.88387 0.85124 0.75752 1.90723 1.16235 1.87252 1.50011 1.45062 1.10858 1.03298 1.73567 1.21411 0.92863 0.86097 0.93108 1.22496 0.92840 1.00298 0.84678 1.86390 1.41071 1.94742 1.16648 1.23606 0.98181 1.01761 0.94740 1.23109 0.88840 0.92811 0.94525 0.88356 1.87869 1.51308 1.39905 1.51391 1.22964 0.95536 0.99658 0.88854 1.23816 1.01985 0.96713 0.94925 1.21343 0.92194 0.99994 1.05049 1.21388 1.01536 0.90867 1.03906 0.91442 0.86633 0.91763 0.82452 0.89575 0.75956 1.22256 1.20997 0.86811 0.86708 0.74852 0.95027 0.90263 0.75812 0.92723 0.86311 0.88912 0.92677 0.93580 0.85640 0.89408 0.82453 0.82256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.69 10.50 -93.26 -0.98 -1.67 16 3 C 0.09 0.28 6.69 22.49 0.15 0.43 16 4 C -0.11 -0.44 8.59 22.36 0.19 -0.25 16 5 C -0.12 -0.90 5.27 -19.78 -0.10 -1.00 16 6 C -0.07 -0.60 2.37 71.24 0.17 -0.43 16 7 O -0.55 -5.41 12.88 -148.98 -1.92 -7.33 16 8 Si 0.79 3.00 29.91 68.60 2.05 5.06 16 9 C 0.10 0.74 6.66 22.49 0.15 0.89 16 10 O -0.31 -3.60 9.00 -74.31 -0.67 -4.27 16 11 C 0.04 0.15 5.22 71.24 0.37 0.53 16 12 C 0.52 4.82 7.39 87.66 0.65 5.46 16 13 O -0.56 -10.74 14.61 16.01 0.23 -10.51 16 14 N -0.68 -2.19 4.38 -420.27 -1.84 -4.03 16 15 C 0.15 0.35 0.81 4.19 0.00 0.35 16 16 C 0.08 0.23 6.28 71.98 0.45 0.68 16 17 O -0.58 -1.88 13.38 -148.98 -1.99 -3.87 16 18 C -0.14 -0.42 6.81 31.12 0.21 -0.21 16 19 C 0.07 -0.09 4.37 31.12 0.14 0.04 16 20 H 0.10 -0.50 7.87 -2.39 -0.02 -0.52 16 21 O -0.39 -0.46 10.14 -148.98 -1.51 -1.97 16 22 C 0.03 -0.10 10.85 113.37 1.23 1.13 16 23 C -0.14 0.48 7.21 31.18 0.22 0.70 16 24 C -0.17 -0.27 9.03 22.35 0.20 -0.07 16 25 C -0.16 -0.03 9.03 22.35 0.20 0.17 16 26 H 0.07 -0.51 7.66 -2.39 -0.02 -0.52 16 27 H 0.12 -0.95 8.14 -2.38 -0.02 -0.97 16 28 H 0.06 -0.45 7.66 -2.39 -0.02 -0.47 16 29 H 0.16 -0.05 5.12 -2.91 -0.01 -0.06 16 30 H 0.09 1.21 7.82 -2.39 -0.02 1.19 16 31 H 0.39 0.02 8.70 -74.05 -0.64 -0.63 16 32 H -0.29 -3.11 7.11 99.48 0.71 -2.40 16 33 H -0.28 -2.31 7.11 99.48 0.71 -1.60 16 34 H 0.11 -0.22 7.66 -2.39 -0.02 -0.24 16 35 H 0.12 -0.16 7.66 -2.39 -0.02 -0.18 16 36 H 0.41 -0.71 8.68 -92.71 -0.81 -1.52 16 37 H 0.03 0.29 7.22 -2.39 -0.02 0.27 16 38 H 0.08 -0.19 7.90 -2.39 -0.02 -0.21 16 39 H 0.39 -1.48 9.12 -74.06 -0.68 -2.15 16 40 H 0.05 0.57 7.36 -2.39 -0.02 0.55 16 41 H 0.12 -0.10 8.10 -2.39 -0.02 -0.12 16 42 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 43 H 0.05 -0.34 8.14 -2.39 -0.02 -0.36 16 44 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 45 H 0.13 -0.92 7.93 -2.39 -0.02 -0.94 16 46 H 0.09 -0.34 8.10 -2.38 -0.02 -0.36 16 47 H 0.16 -0.69 6.29 -2.91 -0.02 -0.71 16 48 H 0.16 -0.88 6.29 -2.91 -0.02 -0.90 16 Total: 0.00 -30.37 395.15 -2.33 -32.71 By element: Atomic # 1 Polarization: -12.51 SS G_CDS: -1.06 Total: -13.57 kcal Atomic # 6 Polarization: 4.10 SS G_CDS: 5.35 Total: 9.46 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: -1.84 Total: -4.03 kcal Atomic # 8 Polarization: -22.78 SS G_CDS: -6.84 Total: -29.62 kcal Atomic # 14 Polarization: 3.00 SS G_CDS: 2.05 Total: 5.06 kcal Total: -30.37 -2.33 -32.71 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_4974302.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.288 kcal (2) G-P(sol) polarization free energy of solvation -30.371 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.658 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.705 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds