Wall clock time and date at job start Sun Mar 7 2021 09:06:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35959 * 117.00438 * 2 1 4 4 C 1.39445 * 120.12724 * 180.02562 * 3 2 1 5 5 O 1.34777 * 133.24262 * 359.95162 * 4 3 2 6 6 C 1.34921 * 110.84590 * 180.02562 * 5 4 3 7 7 C 1.46995 * 125.14010 * 179.97438 * 6 5 4 8 8 O 1.21652 * 120.00224 * 180.02562 * 7 6 5 9 9 N 1.34775 * 119.99993 * 0.02734 * 7 6 5 10 10 C 1.46506 * 119.99790 * 175.01354 * 9 7 6 11 11 C 1.53002 * 112.85167 * 293.64475 * 10 9 7 12 12 O 1.42907 * 109.46995 * 305.09710 * 11 10 9 13 13 C 1.53772 * 113.61412 * 64.84365 * 10 9 7 14 14 C 1.53781 * 87.08323 * 139.98143 * 13 10 9 15 15 H 1.08997 * 113.61942 * 89.19941 * 14 13 10 16 16 O 1.42906 * 113.61212 * 220.02155 * 14 13 10 17 17 C 1.42904 * 113.99552 * 209.99731 * 16 14 13 18 18 C 1.53784 * 87.08041 * 334.56612 * 14 13 10 19 19 C 1.35804 * 109.72188 * 0.02562 * 6 5 4 20 20 C 1.40609 * 119.14499 * 179.97438 * 4 3 2 21 21 C 1.39784 * 120.11427 * 0.02562 * 20 4 3 22 22 C 1.50693 * 120.09326 * 180.02562 * 21 20 4 23 23 O 1.42894 * 109.47358 * 74.99825 * 22 21 20 24 24 Si 1.86304 * 109.47297 * 194.99980 * 22 21 20 25 25 C 1.36633 * 119.80976 * 359.71926 * 21 20 4 26 26 C 1.38261 * 120.11988 * 0.02562 * 3 2 1 27 27 H 1.08996 * 109.47369 * 180.02562 * 1 2 3 28 28 H 1.09008 * 109.47117 * 300.00089 * 1 2 3 29 29 H 1.08999 * 109.47484 * 59.99920 * 1 2 3 30 30 H 0.97000 * 120.00438 * 355.01982 * 9 7 6 31 31 H 1.09005 * 109.46894 * 65.09121 * 11 10 9 32 32 H 1.08993 * 109.46833 * 185.09785 * 11 10 9 33 33 H 0.96700 * 113.99438 * 179.97438 * 12 11 10 34 34 H 1.09004 * 113.61682 * 254.52904 * 13 10 9 35 35 H 1.09001 * 113.61888 * 25.34568 * 13 10 9 36 36 H 1.09003 * 109.46665 * 299.99617 * 17 16 14 37 37 H 1.08992 * 109.47401 * 59.99973 * 17 16 14 38 38 H 1.09000 * 109.47163 * 180.02562 * 17 16 14 39 39 H 1.09003 * 113.61495 * 270.88877 * 18 14 13 40 40 H 1.08994 * 113.61718 * 139.98378 * 18 14 13 41 41 H 1.08000 * 126.96125 * 179.97438 * 19 6 5 42 42 H 1.09006 * 109.47162 * 314.99937 * 22 21 20 43 43 H 0.96705 * 114.00115 * 179.97438 * 23 22 21 44 44 H 1.48493 * 110.00281 * 178.67980 * 24 22 21 45 45 H 1.48503 * 109.99707 * 300.00195 * 24 22 21 46 46 H 1.08003 * 119.74957 * 180.27130 * 25 21 20 47 47 H 1.08001 * 119.66324 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4386 1.2873 -0.0005 5 8 4.4141 0.3573 -0.0003 6 6 5.6317 0.9385 -0.0005 7 6 6.9131 0.2183 0.0002 8 8 7.9596 0.8386 0.0004 9 7 6.9286 -1.1294 0.0006 10 6 8.2010 -1.8473 -0.1090 11 6 8.8813 -1.6472 -1.4648 12 8 7.9769 -2.0111 -2.5098 13 6 9.1386 -1.6254 1.0894 14 6 9.4923 -3.1186 0.9888 15 1 10.3312 -3.3249 0.3242 16 8 9.6178 -3.7638 2.2577 17 6 10.5444 -4.8517 2.2674 18 6 8.1176 -3.3190 0.3292 19 6 5.4945 2.2896 -0.0004 20 6 4.0555 2.5509 -0.0011 21 6 3.2766 3.7116 -0.0005 22 6 3.9382 5.0655 -0.0017 23 8 4.4592 5.3400 -1.3037 24 14 2.6871 6.3685 0.4540 25 6 1.9137 3.6150 -0.0053 26 6 1.2958 2.3725 0.0005 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 6.0974 -1.6240 0.0734 31 1 9.1651 -0.6009 -1.5779 32 1 9.7717 -2.2734 -1.5203 33 1 8.3422 -1.9088 -3.3992 34 1 9.9763 -0.9627 0.8716 35 1 8.6169 -1.3598 2.0088 36 1 10.2232 -5.6088 1.5519 37 1 11.5344 -4.4883 1.9920 38 1 10.5819 -5.2883 3.2654 39 1 7.3165 -3.5179 1.0412 40 1 8.1308 -4.0237 -0.5022 41 1 6.2875 3.0229 -0.0001 42 1 4.7515 5.0731 0.7241 43 1 4.8998 6.1976 -1.3783 44 1 3.3343 7.7046 0.4875 45 1 1.5730 6.3683 -0.5280 46 1 1.3129 4.5124 -0.0093 47 1 0.2174 2.3120 0.0014 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_6672420.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:06:09 Heat of formation + Delta-G solvation = -115.977859 kcal Electronic energy + Delta-G solvation = -33353.945156 eV Core-core repulsion = 28665.542499 eV Total energy + Delta-G solvation = -4688.402657 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.149 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -43.57178 -41.71670 -40.61853 -39.62579 -38.94106 -37.97724 -37.14253 -36.67459 -34.28011 -33.48611 -31.90450 -30.92343 -28.92270 -28.45058 -27.33529 -26.85730 -26.28794 -25.40649 -23.86660 -23.50262 -21.75453 -21.47344 -20.13070 -19.65671 -18.77992 -18.60338 -18.53527 -18.38732 -17.96549 -17.54039 -17.00703 -16.82783 -16.58948 -16.37557 -16.22914 -16.11717 -15.75715 -15.64469 -15.60703 -15.05413 -14.93909 -14.54259 -14.41064 -14.06664 -13.97065 -13.86832 -13.70872 -13.45329 -13.36071 -13.18296 -13.09427 -12.72595 -12.62188 -12.52099 -12.38624 -12.03750 -11.94352 -11.76390 -11.69103 -11.40176 -10.86848 -10.83119 -10.51863 -10.47377 -10.18294 -9.67240 -8.90024 -4.99128 -0.49531 0.21690 0.80245 1.23287 1.38360 1.55765 1.90313 1.96822 2.12197 2.16274 2.45514 2.81140 2.92379 3.21989 3.28588 3.43434 3.52715 3.63274 3.66281 3.72055 3.90266 3.92374 4.01678 4.03232 4.14432 4.16115 4.19008 4.23159 4.29034 4.38560 4.39119 4.43150 4.52013 4.53518 4.56045 4.62785 4.71269 4.75889 4.88130 4.91778 4.96782 4.97123 5.00847 5.14864 5.33366 5.36424 5.43918 5.72463 6.19356 6.24514 6.43934 6.45301 6.59317 7.03387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.046 3.954 5 O -0.172 6.172 6 C -0.020 4.020 7 C 0.607 3.393 8 O -0.511 6.511 9 N -0.693 5.693 10 C 0.155 3.845 11 C 0.082 3.918 12 O -0.566 6.566 13 C -0.126 4.126 14 C 0.063 3.937 15 H 0.093 0.907 16 O -0.373 6.373 17 C 0.028 3.972 18 C -0.149 4.149 19 C -0.106 4.106 20 C -0.082 4.082 21 C -0.051 4.051 22 C -0.074 4.074 23 O -0.533 6.533 24 Si 0.688 3.312 25 C -0.091 4.091 26 C -0.178 4.178 27 H 0.105 0.895 28 H 0.061 0.939 29 H 0.060 0.940 30 H 0.411 0.589 31 H 0.065 0.935 32 H 0.060 0.940 33 H 0.383 0.617 34 H 0.086 0.914 35 H 0.102 0.898 36 H 0.043 0.957 37 H 0.044 0.956 38 H 0.088 0.912 39 H 0.101 0.899 40 H 0.085 0.915 41 H 0.172 0.828 42 H 0.077 0.923 43 H 0.380 0.620 44 H -0.259 1.259 45 H -0.253 1.253 46 H 0.140 0.860 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.604 -1.053 1.320 2.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.074 6.074 6 C -0.071 4.071 7 C 0.392 3.608 8 O -0.388 6.388 9 N -0.343 5.343 10 C 0.069 3.931 11 C 0.003 3.997 12 O -0.371 6.371 13 C -0.165 4.165 14 C 0.004 3.996 15 H 0.111 0.889 16 O -0.291 6.291 17 C -0.069 4.069 18 C -0.187 4.187 19 C -0.127 4.127 20 C -0.083 4.083 21 C -0.052 4.052 22 C -0.184 4.184 23 O -0.340 6.340 24 Si 0.589 3.411 25 C -0.108 4.108 26 C -0.197 4.197 27 H 0.123 0.877 28 H 0.080 0.920 29 H 0.078 0.922 30 H 0.247 0.753 31 H 0.083 0.917 32 H 0.078 0.922 33 H 0.231 0.769 34 H 0.105 0.895 35 H 0.120 0.880 36 H 0.062 0.938 37 H 0.062 0.938 38 H 0.106 0.894 39 H 0.120 0.880 40 H 0.104 0.896 41 H 0.189 0.811 42 H 0.095 0.905 43 H 0.228 0.772 44 H -0.184 1.184 45 H -0.178 1.178 46 H 0.157 0.843 47 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -1.965 -1.060 1.610 2.753 hybrid contribution 0.740 0.324 -1.536 1.736 sum -1.225 -0.737 0.074 1.431 Atomic orbital electron populations 1.23186 0.77375 1.04714 1.01786 1.86173 1.22113 1.25671 1.88375 1.17730 0.86495 0.85863 0.99416 1.18742 0.87465 0.86882 1.07134 1.84062 1.12644 1.34673 1.76009 1.21969 0.83947 0.92539 1.08617 1.16603 0.85415 0.82050 0.76728 1.90880 1.30237 1.67507 1.50133 1.45651 1.10020 1.05372 1.73291 1.21436 0.84729 0.93044 0.93913 1.22251 0.91193 1.00347 0.85892 1.86460 1.42971 1.90163 1.17553 1.23549 0.99581 0.95464 0.97872 1.23583 0.96574 0.93382 0.86037 0.88885 1.87968 1.63082 1.47399 1.30622 1.22846 0.92011 0.89034 1.02970 1.23805 0.99333 0.94479 1.01076 1.22665 0.94649 0.94266 1.01120 1.19398 0.92656 0.92090 1.04153 1.18332 0.92354 0.91983 1.02509 1.24779 1.04872 1.00608 0.88127 1.86625 1.76850 1.41049 1.29498 0.94966 0.79632 0.76897 0.89564 1.20521 0.93360 0.97782 0.99169 1.20943 1.00356 0.90437 1.07941 0.87671 0.92030 0.92165 0.75296 0.91680 0.92227 0.76943 0.89534 0.87956 0.93823 0.93774 0.89381 0.88035 0.89619 0.81060 0.90536 0.77238 1.18437 1.17765 0.84286 0.83426 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.75 10.50 -19.61 -0.21 -0.95 16 3 C 0.15 0.43 6.70 -39.12 -0.26 0.17 16 4 C 0.05 0.20 7.35 -38.24 -0.28 -0.08 16 5 O -0.17 -0.80 10.29 2.67 0.03 -0.77 16 6 C -0.02 -0.09 7.07 -36.91 -0.26 -0.35 16 7 C 0.61 2.47 7.45 -12.71 -0.09 2.37 16 8 O -0.51 -2.99 15.24 5.23 0.08 -2.91 16 9 N -0.69 -1.49 5.12 -48.05 -0.25 -1.73 16 10 C 0.16 0.17 0.85 -131.00 -0.11 0.06 16 11 C 0.08 0.05 6.20 37.16 0.23 0.28 16 12 O -0.57 -0.62 13.53 -35.23 -0.48 -1.10 16 13 C -0.13 -0.15 6.40 -25.92 -0.17 -0.31 16 14 C 0.06 0.01 3.96 -25.92 -0.10 -0.09 16 15 H 0.09 -0.14 7.34 -51.93 -0.38 -0.52 16 16 O -0.37 -0.69 10.71 -35.23 -0.38 -1.07 16 17 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 18 C -0.15 -0.01 7.22 -25.91 -0.19 -0.20 16 19 C -0.11 -0.41 10.68 -37.24 -0.40 -0.80 16 20 C -0.08 -0.32 6.16 -105.21 -0.65 -0.97 16 21 C -0.05 -0.12 5.29 -104.63 -0.55 -0.67 16 22 C -0.07 -0.04 2.70 36.00 0.10 0.05 16 23 O -0.53 -0.98 12.86 -35.23 -0.45 -1.43 16 24 Si 0.69 -0.70 30.21 -169.99 -5.14 -5.84 16 25 C -0.09 -0.08 8.62 -39.97 -0.34 -0.43 16 26 C -0.18 -0.11 9.03 -39.38 -0.36 -0.47 16 27 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 28 H 0.06 -0.20 7.66 -51.92 -0.40 -0.60 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.41 0.49 8.43 -40.82 -0.34 0.15 16 31 H 0.07 0.12 7.21 -51.93 -0.37 -0.25 16 32 H 0.06 -0.09 7.32 -51.93 -0.38 -0.47 16 33 H 0.38 -1.06 9.12 45.56 0.42 -0.65 16 34 H 0.09 0.10 8.10 -51.93 -0.42 -0.32 16 35 H 0.10 0.23 8.14 -51.93 -0.42 -0.19 16 36 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.10 0.03 8.14 -51.93 -0.42 -0.40 16 40 H 0.09 -0.03 8.10 -51.93 -0.42 -0.45 16 41 H 0.17 0.45 8.06 -52.49 -0.42 0.03 16 42 H 0.08 -0.06 7.96 -51.93 -0.41 -0.47 16 43 H 0.38 -0.87 8.74 45.56 0.40 -0.47 16 44 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 45 H -0.25 -0.35 6.74 56.52 0.38 0.03 16 46 H 0.14 -0.14 4.85 -52.48 -0.25 -0.40 16 47 H 0.15 -0.35 6.26 -52.49 -0.33 -0.68 16 LS Contribution 394.30 15.07 5.94 5.94 Total: 0.00 -9.99 394.30 -7.67 -17.67 By element: Atomic # 1 Polarization: -2.92 SS G_CDS: -5.48 Total: -8.40 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -1.35 Total: 0.59 kcal Atomic # 7 Polarization: -1.49 SS G_CDS: -0.25 Total: -1.73 kcal Atomic # 8 Polarization: -6.82 SS G_CDS: -1.41 Total: -8.23 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.14 Total: -5.84 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.99 -7.67 -17.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_6672420.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.313 kcal (2) G-P(sol) polarization free energy of solvation -9.992 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.305 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.673 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.978 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds