Wall clock time and date at job start Sun Mar 7 2021 09:06:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35959 * 117.00438 * 2 1 4 4 C 1.39445 * 120.12724 * 180.02562 * 3 2 1 5 5 O 1.34777 * 133.24262 * 359.95162 * 4 3 2 6 6 C 1.34921 * 110.84590 * 180.02562 * 5 4 3 7 7 C 1.46995 * 125.14010 * 179.97438 * 6 5 4 8 8 O 1.21652 * 120.00224 * 180.02562 * 7 6 5 9 9 N 1.34775 * 119.99993 * 0.02734 * 7 6 5 10 10 C 1.46506 * 119.99790 * 175.01354 * 9 7 6 11 11 C 1.53002 * 112.85167 * 293.64475 * 10 9 7 12 12 O 1.42907 * 109.46995 * 305.09710 * 11 10 9 13 13 C 1.53772 * 113.61412 * 64.84365 * 10 9 7 14 14 C 1.53781 * 87.08323 * 139.98143 * 13 10 9 15 15 H 1.08997 * 113.61942 * 89.19941 * 14 13 10 16 16 O 1.42906 * 113.61212 * 220.02155 * 14 13 10 17 17 C 1.42904 * 113.99552 * 209.99731 * 16 14 13 18 18 C 1.53784 * 87.08041 * 334.56612 * 14 13 10 19 19 C 1.35804 * 109.72188 * 0.02562 * 6 5 4 20 20 C 1.40609 * 119.14499 * 179.97438 * 4 3 2 21 21 C 1.39784 * 120.11427 * 0.02562 * 20 4 3 22 22 C 1.50693 * 120.09326 * 180.02562 * 21 20 4 23 23 O 1.42894 * 109.47358 * 74.99825 * 22 21 20 24 24 Si 1.86304 * 109.47297 * 194.99980 * 22 21 20 25 25 C 1.36633 * 119.80976 * 359.71926 * 21 20 4 26 26 C 1.38261 * 120.11988 * 0.02562 * 3 2 1 27 27 H 1.08996 * 109.47369 * 180.02562 * 1 2 3 28 28 H 1.09008 * 109.47117 * 300.00089 * 1 2 3 29 29 H 1.08999 * 109.47484 * 59.99920 * 1 2 3 30 30 H 0.97000 * 120.00438 * 355.01982 * 9 7 6 31 31 H 1.09005 * 109.46894 * 65.09121 * 11 10 9 32 32 H 1.08993 * 109.46833 * 185.09785 * 11 10 9 33 33 H 0.96700 * 113.99438 * 179.97438 * 12 11 10 34 34 H 1.09004 * 113.61682 * 254.52904 * 13 10 9 35 35 H 1.09001 * 113.61888 * 25.34568 * 13 10 9 36 36 H 1.09003 * 109.46665 * 299.99617 * 17 16 14 37 37 H 1.08992 * 109.47401 * 59.99973 * 17 16 14 38 38 H 1.09000 * 109.47163 * 180.02562 * 17 16 14 39 39 H 1.09003 * 113.61495 * 270.88877 * 18 14 13 40 40 H 1.08994 * 113.61718 * 139.98378 * 18 14 13 41 41 H 1.08000 * 126.96125 * 179.97438 * 19 6 5 42 42 H 1.09006 * 109.47162 * 314.99937 * 22 21 20 43 43 H 0.96705 * 114.00115 * 179.97438 * 23 22 21 44 44 H 1.48493 * 110.00281 * 178.67980 * 24 22 21 45 45 H 1.48503 * 109.99707 * 300.00195 * 24 22 21 46 46 H 1.08003 * 119.74957 * 180.27130 * 25 21 20 47 47 H 1.08001 * 119.66324 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4386 1.2873 -0.0005 5 8 4.4141 0.3573 -0.0003 6 6 5.6317 0.9385 -0.0005 7 6 6.9131 0.2183 0.0002 8 8 7.9596 0.8386 0.0004 9 7 6.9286 -1.1294 0.0006 10 6 8.2010 -1.8473 -0.1090 11 6 8.8813 -1.6472 -1.4648 12 8 7.9769 -2.0111 -2.5098 13 6 9.1386 -1.6254 1.0894 14 6 9.4923 -3.1186 0.9888 15 1 10.3312 -3.3249 0.3242 16 8 9.6178 -3.7638 2.2577 17 6 10.5444 -4.8517 2.2674 18 6 8.1176 -3.3190 0.3292 19 6 5.4945 2.2896 -0.0004 20 6 4.0555 2.5509 -0.0011 21 6 3.2766 3.7116 -0.0005 22 6 3.9382 5.0655 -0.0017 23 8 4.4592 5.3400 -1.3037 24 14 2.6871 6.3685 0.4540 25 6 1.9137 3.6150 -0.0053 26 6 1.2958 2.3725 0.0005 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 6.0974 -1.6240 0.0734 31 1 9.1651 -0.6009 -1.5779 32 1 9.7717 -2.2734 -1.5203 33 1 8.3422 -1.9088 -3.3992 34 1 9.9763 -0.9627 0.8716 35 1 8.6169 -1.3598 2.0088 36 1 10.2232 -5.6088 1.5519 37 1 11.5344 -4.4883 1.9920 38 1 10.5819 -5.2883 3.2654 39 1 7.3165 -3.5179 1.0412 40 1 8.1308 -4.0237 -0.5022 41 1 6.2875 3.0229 -0.0001 42 1 4.7515 5.0731 0.7241 43 1 4.8998 6.1976 -1.3783 44 1 3.3343 7.7046 0.4875 45 1 1.5730 6.3683 -0.5280 46 1 1.3129 4.5124 -0.0093 47 1 0.2174 2.3120 0.0014 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_6672420.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:06:08 Heat of formation + Delta-G solvation = -121.722008 kcal Electronic energy + Delta-G solvation = -33354.194241 eV Core-core repulsion = 28665.542499 eV Total energy + Delta-G solvation = -4688.651742 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.149 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.78946 -41.84851 -40.70202 -39.82985 -39.02054 -38.04556 -37.22553 -36.74177 -34.48579 -33.69303 -32.02144 -31.07114 -28.91625 -28.41368 -27.32431 -26.90321 -26.33645 -25.55549 -24.03769 -23.58361 -21.87880 -21.69915 -20.25297 -19.82093 -18.92976 -18.66509 -18.59873 -18.46889 -18.02579 -17.76276 -17.08220 -16.94160 -16.65325 -16.45347 -16.31457 -16.13516 -15.89366 -15.74123 -15.62407 -15.14523 -15.04172 -14.65778 -14.54505 -14.23095 -14.01738 -13.95497 -13.74593 -13.53030 -13.40348 -13.24597 -13.15101 -12.74759 -12.56482 -12.53316 -12.38663 -12.08045 -12.00324 -11.82005 -11.74042 -11.58909 -11.04985 -10.93039 -10.54464 -10.49309 -10.38231 -9.86450 -9.03511 -4.90451 -0.70030 0.06417 0.58599 1.15344 1.28585 1.61537 1.79241 1.88400 1.93276 2.10829 2.33506 2.80024 2.90938 3.12338 3.22434 3.36464 3.50568 3.52945 3.61589 3.69121 3.79173 3.90061 3.94101 3.96141 4.10495 4.13490 4.30741 4.32080 4.35816 4.40586 4.41753 4.44523 4.52357 4.55393 4.58155 4.63212 4.74696 4.80087 4.81338 4.83393 4.88034 4.88069 4.96834 5.00943 5.18783 5.23235 5.34154 5.55677 6.15666 6.22077 6.26102 6.57857 6.72580 6.78990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.333 6.333 3 C 0.137 3.863 4 C 0.019 3.981 5 O -0.183 6.183 6 C -0.034 4.034 7 C 0.606 3.394 8 O -0.535 6.535 9 N -0.686 5.686 10 C 0.147 3.853 11 C 0.084 3.916 12 O -0.582 6.582 13 C -0.129 4.129 14 C 0.069 3.931 15 H 0.115 0.885 16 O -0.397 6.397 17 C 0.022 3.978 18 C -0.141 4.141 19 C -0.110 4.110 20 C -0.098 4.098 21 C -0.065 4.065 22 C -0.093 4.093 23 O -0.557 6.557 24 Si 0.779 3.221 25 C -0.090 4.090 26 C -0.165 4.165 27 H 0.116 0.884 28 H 0.078 0.922 29 H 0.072 0.928 30 H 0.414 0.586 31 H 0.048 0.952 32 H 0.086 0.914 33 H 0.398 0.602 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.053 0.947 37 H 0.054 0.946 38 H 0.092 0.908 39 H 0.096 0.904 40 H 0.095 0.905 41 H 0.176 0.824 42 H 0.086 0.914 43 H 0.395 0.605 44 H -0.286 1.286 45 H -0.280 1.280 46 H 0.162 0.838 47 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.640 -1.080 1.246 3.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.091 3.909 4 C -0.029 4.029 5 O -0.085 6.085 6 C -0.084 4.084 7 C 0.391 3.609 8 O -0.414 6.414 9 N -0.336 5.336 10 C 0.061 3.939 11 C 0.006 3.994 12 O -0.391 6.391 13 C -0.168 4.168 14 C 0.010 3.990 15 H 0.133 0.867 16 O -0.316 6.316 17 C -0.074 4.074 18 C -0.179 4.179 19 C -0.131 4.131 20 C -0.099 4.099 21 C -0.065 4.065 22 C -0.200 4.200 23 O -0.367 6.367 24 Si 0.682 3.318 25 C -0.107 4.107 26 C -0.184 4.184 27 H 0.135 0.865 28 H 0.097 0.903 29 H 0.091 0.909 30 H 0.251 0.749 31 H 0.066 0.934 32 H 0.104 0.896 33 H 0.249 0.751 34 H 0.103 0.897 35 H 0.104 0.896 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.110 0.890 39 H 0.115 0.885 40 H 0.113 0.887 41 H 0.194 0.806 42 H 0.104 0.896 43 H 0.245 0.755 44 H -0.213 1.213 45 H -0.207 1.207 46 H 0.179 0.821 47 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -2.988 -1.123 1.532 3.541 hybrid contribution 1.012 0.338 -1.536 1.870 sum -1.976 -0.785 -0.004 2.126 Atomic orbital electron populations 1.23496 0.75284 1.06059 1.03183 1.86145 1.24369 1.25735 1.88442 1.17966 0.86114 0.86840 0.99973 1.19218 0.88304 0.87121 1.08216 1.84021 1.12833 1.35136 1.76481 1.22032 0.84055 0.92834 1.09488 1.16643 0.85099 0.82544 0.76578 1.90851 1.30901 1.68054 1.51612 1.45684 1.10787 1.04856 1.72244 1.21658 0.84214 0.93607 0.94391 1.22241 0.91835 0.99930 0.85423 1.86417 1.43807 1.90128 1.18700 1.23508 0.99450 0.96573 0.97230 1.23642 0.97259 0.92159 0.85913 0.86727 1.87934 1.63891 1.48263 1.31508 1.23000 0.92074 0.88668 1.03652 1.23747 0.99274 0.93724 1.01146 1.22824 0.95181 0.94323 1.00786 1.19603 0.92583 0.92726 1.04962 1.18668 0.93089 0.92254 1.02501 1.25164 1.06222 1.00715 0.87913 1.86573 1.77381 1.42526 1.30262 0.93926 0.76601 0.73678 0.87562 1.20845 0.93002 0.98810 0.98062 1.21350 1.01848 0.89444 1.05751 0.86545 0.90319 0.90942 0.74924 0.93362 0.89628 0.75144 0.89729 0.89609 0.92836 0.92781 0.88991 0.88505 0.88661 0.80627 0.89640 0.75506 1.21287 1.20710 0.82102 0.80131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.33 -1.74 10.50 -93.08 -0.98 -2.71 16 3 C 0.14 0.85 6.70 22.57 0.15 1.01 16 4 C 0.02 0.21 7.35 23.14 0.17 0.38 16 5 O -0.18 -2.17 10.29 -13.36 -0.14 -2.30 16 6 C -0.03 -0.38 7.07 24.00 0.17 -0.21 16 7 C 0.61 6.45 7.45 86.54 0.64 7.09 16 8 O -0.54 -7.64 15.24 -4.20 -0.06 -7.71 16 9 N -0.69 -4.29 5.12 -424.16 -2.17 -6.46 16 10 C 0.15 0.48 0.85 4.13 0.00 0.48 16 11 C 0.08 0.14 6.20 71.98 0.45 0.59 16 12 O -0.58 -1.48 13.53 -148.98 -2.02 -3.50 16 13 C -0.13 -0.48 6.40 31.12 0.20 -0.28 16 14 C 0.07 0.03 3.96 31.12 0.12 0.15 16 15 H 0.12 -0.48 7.34 -2.39 -0.02 -0.50 16 16 O -0.40 -1.57 10.71 -148.98 -1.60 -3.17 16 17 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 18 C -0.14 -0.06 7.22 31.12 0.22 0.17 16 19 C -0.11 -1.11 10.68 23.79 0.25 -0.86 16 20 C -0.10 -0.92 6.16 -20.24 -0.12 -1.04 16 21 C -0.06 -0.33 5.29 -19.87 -0.11 -0.43 16 22 C -0.09 -0.13 2.70 71.23 0.19 0.07 16 23 O -0.56 -2.36 12.86 -148.98 -1.92 -4.28 16 24 Si 0.78 -2.28 30.21 68.60 2.07 -0.21 16 25 C -0.09 -0.09 8.62 22.02 0.19 0.10 16 26 C -0.17 -0.05 9.03 22.40 0.20 0.16 16 27 H 0.12 -0.86 8.14 -2.39 -0.02 -0.88 16 28 H 0.08 -0.65 7.66 -2.38 -0.02 -0.67 16 29 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 30 H 0.41 1.85 8.43 -92.71 -0.78 1.07 16 31 H 0.05 0.25 7.21 -2.38 -0.02 0.23 16 32 H 0.09 -0.33 7.32 -2.39 -0.02 -0.35 16 33 H 0.40 -2.15 9.12 -74.06 -0.68 -2.82 16 34 H 0.08 0.32 8.10 -2.38 -0.02 0.30 16 35 H 0.09 0.59 8.14 -2.39 -0.02 0.57 16 36 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 37 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 38 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 39 H 0.10 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.09 -0.13 8.10 -2.39 -0.02 -0.14 16 41 H 0.18 1.38 8.06 -2.91 -0.02 1.35 16 42 H 0.09 -0.09 7.96 -2.38 -0.02 -0.11 16 43 H 0.39 -1.61 8.74 -74.05 -0.65 -2.26 16 44 H -0.29 -0.41 7.11 99.48 0.71 0.29 16 45 H -0.28 -0.46 6.74 99.48 0.67 0.21 16 46 H 0.16 -0.62 4.85 -2.91 -0.01 -0.64 16 47 H 0.18 -1.30 6.26 -2.91 -0.02 -1.32 16 Total: 0.00 -24.83 394.30 -2.77 -27.60 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -1.04 Total: -6.86 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: 5.08 Total: 9.60 kcal Atomic # 7 Polarization: -4.29 SS G_CDS: -2.17 Total: -6.46 kcal Atomic # 8 Polarization: -16.96 SS G_CDS: -6.71 Total: -23.67 kcal Atomic # 14 Polarization: -2.28 SS G_CDS: 2.07 Total: -0.21 kcal Total: -24.83 -2.77 -27.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_6672420.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.126 kcal (2) G-P(sol) polarization free energy of solvation -24.829 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds