Wall clock time and date at job start Sun Mar 7 2021 09:06:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42899 * 114.00587 * 2 1 4 4 H 1.09000 * 112.90550 * 341.25381 * 3 2 1 5 5 C 1.53786 * 113.61348 * 112.50011 * 3 2 1 6 6 C 1.53781 * 87.07973 * 139.98751 * 5 3 2 7 7 C 1.52997 * 113.69275 * 89.12610 * 6 5 3 8 8 O 1.42901 * 109.47164 * 76.35907 * 7 6 5 9 9 N 1.46499 * 113.60965 * 220.02021 * 6 5 3 10 10 C 1.34784 * 119.99844 * 162.32394 * 9 6 5 11 11 O 1.21286 * 119.99547 * 355.01500 * 10 9 6 12 12 C 1.50692 * 120.00028 * 175.02144 * 10 9 6 13 13 N 1.46501 * 109.47277 * 179.97438 * 12 10 9 14 14 C 1.36829 * 125.06254 * 264.97642 * 13 12 10 15 15 C 1.34239 * 109.94242 * 179.97438 * 14 13 12 16 16 C 1.50695 * 126.50170 * 179.97438 * 15 14 13 17 17 O 1.42904 * 109.47130 * 255.02072 * 16 15 14 18 18 Si 1.86300 * 109.47121 * 15.02547 * 16 15 14 19 19 C 1.46495 * 106.99317 * 0.24003 * 15 14 13 20 20 C 1.39590 * 134.03086 * 180.47513 * 19 15 14 21 21 C 1.36668 * 119.76329 * 179.63791 * 20 19 15 22 22 C 1.38786 * 120.52554 * 359.67994 * 21 20 19 23 23 C 1.37783 * 120.66954 * 0.02562 * 22 21 20 24 24 C 1.37690 * 125.06521 * 84.96826 * 13 12 10 25 25 C 1.53777 * 113.61968 * 209.99938 * 3 2 1 26 26 H 1.09002 * 109.47304 * 300.00548 * 1 2 3 27 27 H 1.08999 * 109.46867 * 59.99942 * 1 2 3 28 28 H 1.08997 * 109.47730 * 179.97438 * 1 2 3 29 29 H 1.08997 * 113.61279 * 25.43779 * 5 3 2 30 30 H 1.09003 * 113.60976 * 254.53244 * 5 3 2 31 31 H 1.08994 * 109.47093 * 196.35629 * 7 6 5 32 32 H 1.08996 * 109.47147 * 316.36330 * 7 6 5 33 33 H 0.96694 * 113.99990 * 180.02562 * 8 7 6 34 34 H 0.96996 * 120.00824 * 342.32066 * 9 6 5 35 35 H 1.08998 * 109.47557 * 59.99435 * 12 10 9 36 36 H 1.09001 * 109.47054 * 299.99229 * 12 10 9 37 37 H 1.08002 * 125.03288 * 359.97049 * 14 13 12 38 38 H 1.09005 * 109.46976 * 135.02696 * 16 15 14 39 39 H 0.96702 * 113.99625 * 60.00489 * 17 16 15 40 40 H 1.48490 * 110.00228 * 58.68209 * 18 16 15 41 41 H 1.48503 * 109.99695 * 179.97438 * 18 16 15 42 42 H 1.08001 * 120.12360 * 359.34650 * 20 19 15 43 43 H 1.07997 * 119.73443 * 179.70071 * 21 20 19 44 44 H 1.08000 * 119.66565 * 179.97438 * 22 21 20 45 45 H 1.08003 * 120.11624 * 180.02562 * 23 22 21 46 46 H 1.08998 * 113.61666 * 105.46971 * 25 3 2 47 47 H 1.08999 * 113.68585 * 334.57851 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0797 -0.3227 5 6 2.7535 1.6487 1.3018 6 6 3.8228 2.3180 0.4223 7 6 3.5433 3.7937 0.1305 8 8 3.8595 4.5756 1.2840 9 7 5.1935 2.0784 0.8805 10 6 6.2296 2.2848 0.0435 11 8 6.0239 2.5813 -1.1144 12 6 7.6434 2.1471 0.5464 13 7 8.5795 2.4190 -0.5473 14 6 9.1497 1.4678 -1.3487 15 6 9.9560 2.0514 -2.2494 16 6 10.7678 1.3541 -3.3103 17 8 12.1441 1.3419 -2.9257 18 14 10.1619 -0.3968 -3.5054 19 6 9.9019 3.4941 -2.0011 20 6 10.5013 4.6044 -2.5981 21 6 10.2334 5.8575 -2.1228 22 6 9.3647 6.0357 -1.0552 23 6 8.7575 4.9542 -0.4552 24 6 9.0163 3.6698 -0.9220 25 6 3.3756 1.3718 -0.7045 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 3.1166 0.7738 1.8410 30 1 2.2140 2.3476 1.9412 31 1 4.1566 4.1205 -0.7092 32 1 2.4896 3.9218 -0.1175 33 1 3.7059 5.5235 1.1708 34 1 5.3555 1.7712 1.7862 35 1 7.8008 1.1336 0.9153 36 1 7.8124 2.8584 1.3549 37 1 8.9768 0.4047 -1.2684 38 1 10.6599 1.8836 -4.2570 39 1 12.3149 0.8860 -2.0902 40 1 8.7235 -0.3983 -3.8743 41 1 10.9542 -1.0950 -4.5495 42 1 11.1780 4.4735 -3.4295 43 1 10.7012 6.7159 -2.5819 44 1 9.1632 7.0321 -0.6906 45 1 8.0826 5.1032 0.3748 46 1 3.3385 1.8470 -1.6847 47 1 3.9098 0.4217 -0.7146 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_9818708.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:06:25 Heat of formation + Delta-G solvation = -51.489384 kcal Electronic energy + Delta-G solvation = -31240.229359 eV Core-core repulsion = 26971.023986 eV Total energy + Delta-G solvation = -4269.205373 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.161 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.48311 -41.71036 -39.81043 -38.13387 -37.93083 -37.45381 -36.74051 -34.47010 -33.80802 -31.33136 -30.09740 -29.26575 -28.41144 -27.41202 -26.93041 -25.79833 -24.22253 -23.49763 -22.51648 -21.57737 -20.56765 -20.20471 -18.73789 -18.67784 -18.33227 -18.02851 -17.57906 -17.17536 -16.87472 -16.40746 -16.30458 -16.18643 -16.08069 -15.84191 -15.59374 -15.28134 -15.26314 -14.98299 -14.63078 -14.53869 -14.29675 -13.89894 -13.82677 -13.63379 -13.54671 -13.38784 -13.09939 -12.79223 -12.57438 -12.55562 -12.42716 -12.09213 -12.01190 -11.97471 -11.83741 -11.65179 -11.30335 -10.82105 -10.59662 -10.38677 -10.20212 -10.19940 -8.99852 -8.49794 -5.00160 0.30236 0.81741 1.39787 1.43223 1.49299 1.69199 1.80838 2.08861 2.10424 2.73683 2.84388 3.13209 3.16784 3.42203 3.52163 3.54449 3.60620 3.67918 3.78172 3.83741 3.87217 3.89543 4.06656 4.10182 4.21067 4.31598 4.33050 4.36081 4.40213 4.47830 4.54589 4.60660 4.61388 4.68710 4.73554 4.79913 4.82166 4.89254 4.92461 4.92894 5.00723 5.27715 5.36291 5.66810 5.83302 5.88896 5.92266 6.11374 6.21071 6.35734 6.41062 6.47786 6.77917 7.07454 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.062 3.938 4 H 0.092 0.908 5 C -0.149 4.149 6 C 0.159 3.841 7 C 0.083 3.917 8 O -0.567 6.567 9 N -0.705 5.705 10 C 0.495 3.505 11 O -0.513 6.513 12 C 0.091 3.909 13 N -0.465 5.465 14 C 0.070 3.930 15 C -0.198 4.198 16 C -0.028 4.028 17 O -0.542 6.542 18 Si 0.682 3.318 19 C -0.087 4.087 20 C -0.066 4.066 21 C -0.146 4.146 22 C -0.098 4.098 23 C -0.127 4.127 24 C 0.110 3.890 25 C -0.125 4.125 26 H 0.043 0.957 27 H 0.043 0.957 28 H 0.088 0.912 29 H 0.100 0.900 30 H 0.084 0.916 31 H 0.063 0.937 32 H 0.057 0.943 33 H 0.383 0.617 34 H 0.404 0.596 35 H 0.122 0.878 36 H 0.118 0.882 37 H 0.171 0.829 38 H 0.110 0.890 39 H 0.376 0.624 40 H -0.256 1.256 41 H -0.255 1.255 42 H 0.122 0.878 43 H 0.122 0.878 44 H 0.124 0.876 45 H 0.115 0.885 46 H 0.082 0.918 47 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.538 -1.131 6.157 7.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.003 3.997 4 H 0.110 0.890 5 C -0.187 4.187 6 C 0.072 3.928 7 C 0.004 3.996 8 O -0.372 6.372 9 N -0.358 5.358 10 C 0.279 3.721 11 O -0.387 6.387 12 C -0.035 4.035 13 N -0.148 5.148 14 C -0.055 4.055 15 C -0.206 4.206 16 C -0.139 4.139 17 O -0.347 6.347 18 Si 0.583 3.417 19 C -0.091 4.091 20 C -0.085 4.085 21 C -0.165 4.165 22 C -0.117 4.117 23 C -0.147 4.147 24 C 0.005 3.995 25 C -0.164 4.164 26 H 0.062 0.938 27 H 0.062 0.938 28 H 0.107 0.893 29 H 0.119 0.881 30 H 0.102 0.898 31 H 0.081 0.919 32 H 0.075 0.925 33 H 0.230 0.770 34 H 0.239 0.761 35 H 0.140 0.860 36 H 0.136 0.864 37 H 0.188 0.812 38 H 0.128 0.872 39 H 0.223 0.777 40 H -0.181 1.181 41 H -0.179 1.179 42 H 0.140 0.860 43 H 0.140 0.860 44 H 0.142 0.858 45 H 0.133 0.867 46 H 0.101 0.899 47 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.922 -2.020 4.683 6.434 hybrid contribution -0.576 1.287 0.135 1.416 sum -4.497 -0.733 4.818 6.631 Atomic orbital electron populations 1.22847 0.80665 1.03199 1.00152 1.87955 1.20067 1.26599 1.94502 1.23592 0.93974 0.85939 0.96166 0.89030 1.23794 0.96197 1.01022 0.97643 1.21322 0.81280 0.93036 0.97125 1.22226 0.99326 0.89398 0.88613 1.86417 1.90297 1.22626 1.37906 1.45703 1.04924 1.68908 1.16270 1.20974 0.87062 0.77455 0.86594 1.90788 1.85306 1.45605 1.17017 1.21594 0.86507 1.05756 0.89624 1.43206 1.37938 1.04744 1.28895 1.21504 0.97048 0.94023 0.92938 1.20621 1.05512 0.92400 1.02080 1.24319 0.83878 1.08758 0.96996 1.86501 1.23006 1.80894 1.44310 0.95398 0.79864 0.77774 0.88646 1.18943 1.00009 0.92847 0.97298 1.20304 0.98312 0.90930 0.98947 1.20662 1.00505 0.97002 0.98359 1.20811 0.96843 0.97849 0.96203 1.19965 1.03232 0.89320 1.02221 1.18154 0.98150 0.85795 0.97370 1.23513 0.94673 0.99900 0.98283 0.93796 0.93789 0.89336 0.88145 0.89767 0.91882 0.92509 0.76960 0.76058 0.85962 0.86362 0.81249 0.87222 0.77722 1.18058 1.17923 0.86024 0.85992 0.85801 0.86718 0.89887 0.88182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.45 10.71 -35.23 -0.38 -0.83 16 3 C 0.06 -0.03 3.96 -25.92 -0.10 -0.13 16 4 H 0.09 -0.16 7.34 -51.93 -0.38 -0.55 16 5 C -0.15 0.21 7.22 -25.92 -0.19 0.02 16 6 C 0.16 -0.09 0.86 -131.01 -0.11 -0.20 16 7 C 0.08 -0.03 6.20 37.16 0.23 0.20 16 8 O -0.57 0.29 13.53 -35.23 -0.48 -0.18 16 9 N -0.71 1.01 5.12 -46.86 -0.24 0.77 16 10 C 0.50 0.26 7.56 -10.99 -0.08 0.18 16 11 O -0.51 -2.52 14.84 5.55 0.08 -2.44 16 12 C 0.09 -0.18 6.48 -5.20 -0.03 -0.21 16 13 N -0.46 -0.67 2.27 -115.71 -0.26 -0.93 16 14 C 0.07 0.06 9.89 -16.73 -0.17 -0.10 16 15 C -0.20 -0.53 5.58 -102.71 -0.57 -1.10 16 16 C -0.03 -0.05 3.06 36.00 0.11 0.06 16 17 O -0.54 -1.00 12.88 -35.23 -0.45 -1.45 16 18 Si 0.68 0.07 30.75 -169.99 -5.23 -5.16 16 19 C -0.09 -0.39 6.35 -105.14 -0.67 -1.06 16 20 C -0.07 -0.27 10.05 -39.64 -0.40 -0.67 16 21 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 22 C -0.10 -0.24 10.01 -39.55 -0.40 -0.64 16 23 C -0.13 -0.37 10.00 -39.43 -0.39 -0.76 16 24 C 0.11 0.41 6.80 -83.99 -0.57 -0.16 16 25 C -0.13 -0.06 6.40 -25.92 -0.17 -0.23 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 31 H 0.06 0.11 7.21 -51.93 -0.37 -0.27 16 32 H 0.06 -0.10 7.32 -51.93 -0.38 -0.48 16 33 H 0.38 -1.51 9.12 45.56 0.42 -1.10 16 34 H 0.40 -1.61 8.71 -40.82 -0.36 -1.97 16 35 H 0.12 -0.67 8.12 -51.93 -0.42 -1.09 16 36 H 0.12 -0.43 8.14 -51.93 -0.42 -0.85 16 37 H 0.17 -0.44 6.35 -52.49 -0.33 -0.77 16 38 H 0.11 0.30 7.96 -51.93 -0.41 -0.11 16 39 H 0.38 -0.85 8.70 45.56 0.40 -0.45 16 40 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 41 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 42 H 0.12 0.39 8.06 -52.49 -0.42 -0.03 16 43 H 0.12 0.13 8.06 -52.49 -0.42 -0.30 16 44 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 45 H 0.11 0.14 8.06 -52.48 -0.42 -0.28 16 46 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 47 H 0.10 0.14 8.14 -51.93 -0.42 -0.28 16 LS Contribution 393.64 15.07 5.93 5.93 Total: 0.00 -11.71 393.64 -9.95 -21.66 By element: Atomic # 1 Polarization: -6.67 SS G_CDS: -6.11 Total: -12.79 kcal Atomic # 6 Polarization: -1.77 SS G_CDS: -2.81 Total: -4.58 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.50 Total: -0.16 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -1.23 Total: -4.90 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.23 Total: -5.16 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -11.71 -9.95 -21.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_9818708.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.831 kcal (2) G-P(sol) polarization free energy of solvation -11.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.659 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.489 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds