Wall clock time and date at job start Sun Mar 7 2021 14:24:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 C 1.81404 * 102.99416 * 2 1 4 4 H 1.08995 * 112.85678 * 316.19436 * 3 2 1 5 5 C 1.53957 * 113.74400 * 87.40398 * 3 2 1 6 6 C 1.53777 * 87.02072 * 139.93987 * 5 3 2 7 7 H 1.08994 * 113.61542 * 89.23419 * 6 5 3 8 8 C 1.53002 * 113.61630 * 220.04956 * 6 5 3 9 9 N 1.46505 * 109.46958 * 274.13902 * 8 6 5 10 10 C 1.34777 * 120.00115 * 179.97438 * 9 8 6 11 11 O 1.21288 * 119.99593 * 359.97438 * 10 9 8 12 12 C 1.50697 * 120.00369 * 179.97438 * 10 9 8 13 13 C 1.53001 * 109.47291 * 179.97438 * 12 10 9 14 14 C 1.53000 * 109.46886 * 179.97438 * 13 12 10 15 15 O 1.42903 * 109.46726 * 180.02562 * 14 13 12 16 16 C 1.35904 * 116.99628 * 180.02562 * 15 14 13 17 17 C 1.38709 * 120.05185 * 180.02562 * 16 15 14 18 18 C 1.38173 * 119.94156 * 180.02562 * 17 16 15 19 19 C 1.50704 * 119.97170 * 180.02562 * 18 17 16 20 20 O 1.42891 * 109.47329 * 64.99493 * 19 18 17 21 21 Si 1.86295 * 109.47053 * 184.99878 * 19 18 17 22 22 C 1.38245 * 120.05607 * 359.97438 * 18 17 16 23 23 C 1.38284 * 120.11162 * 0.02881 * 22 18 17 24 24 C 1.38121 * 120.05670 * 359.67148 * 23 22 18 25 25 C 1.53775 * 87.17329 * 334.63702 * 6 5 3 26 26 H 1.09003 * 109.47725 * 60.00145 * 1 2 3 27 27 H 1.09007 * 109.46811 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47559 * 299.99804 * 1 2 3 29 29 H 1.09003 * 113.60991 * 25.42171 * 5 3 2 30 30 H 1.09001 * 113.66790 * 254.46957 * 5 3 2 31 31 H 1.08998 * 109.47844 * 154.13505 * 8 6 5 32 32 H 1.09002 * 109.46838 * 34.13234 * 8 6 5 33 33 H 0.97003 * 120.00244 * 359.97438 * 9 8 6 34 34 H 1.09001 * 109.46613 * 59.99889 * 12 10 9 35 35 H 1.09002 * 109.47120 * 300.00240 * 12 10 9 36 36 H 1.09001 * 109.46652 * 60.00253 * 13 12 10 37 37 H 1.08992 * 109.47514 * 300.00342 * 13 12 10 38 38 H 1.09002 * 109.47398 * 300.00496 * 14 13 12 39 39 H 1.09001 * 109.47194 * 60.00677 * 14 13 12 40 40 H 1.07998 * 120.03116 * 359.97438 * 17 16 15 41 41 H 1.09000 * 109.46586 * 304.99505 * 19 18 17 42 42 H 0.96699 * 114.00072 * 180.02562 * 20 19 18 43 43 H 1.48504 * 110.00112 * 299.99691 * 21 19 18 44 44 H 1.48503 * 110.00467 * 61.31383 * 21 19 18 45 45 H 1.08003 * 119.94344 * 180.02562 * 22 18 17 46 46 H 1.07998 * 119.97585 * 179.97438 * 23 22 18 47 47 H 1.08003 * 120.03435 * 180.31896 * 24 23 22 48 48 H 1.09006 * 113.61195 * 139.93878 * 25 6 5 49 49 H 1.08996 * 113.61811 * 270.83929 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2219 1.7676 0.0000 4 1 1.6108 2.3431 -0.6952 5 6 2.2991 2.3860 1.4078 6 6 3.5199 3.1754 0.9067 7 1 3.2651 4.1360 0.4593 8 6 4.6470 3.2798 1.9362 9 7 4.3996 4.4244 2.8166 10 6 5.2672 4.7127 3.8069 11 8 6.2524 4.0243 3.9694 12 6 5.0131 5.8903 4.7122 13 6 6.1394 5.9940 5.7425 14 6 5.8817 7.1900 6.6612 15 8 6.9340 7.2871 7.6232 16 6 6.8564 8.3037 8.5218 17 6 7.8442 8.4576 9.4834 18 6 7.7628 9.4916 10.3963 19 6 8.8359 9.6599 11.4409 20 8 10.0748 9.9784 10.8042 21 14 8.3620 11.0378 12.6017 22 6 6.6984 10.3726 10.3515 23 6 5.7123 10.2212 9.3939 24 6 5.7923 9.1929 8.4752 25 6 3.7281 2.0522 -0.1227 26 1 -0.3635 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 2.5366 1.6641 2.1893 30 1 1.4445 3.0151 1.6568 31 1 5.5980 3.4163 1.4213 32 1 4.6828 2.3662 2.5295 33 1 3.6114 4.9747 2.6868 34 1 4.0618 5.7544 5.2267 35 1 4.9779 6.8039 4.1187 36 1 7.0908 6.1297 5.2282 37 1 6.1742 5.0804 6.3359 38 1 5.8471 8.1035 6.0675 39 1 4.9302 7.0548 7.1755 40 1 8.6757 7.7694 9.5191 41 1 8.9442 8.7323 12.0031 42 1 10.8123 10.1006 11.4176 43 1 8.2111 12.3081 11.8474 44 1 7.0912 10.7043 13.2940 45 1 6.6368 11.1804 11.0657 46 1 4.8815 10.9105 9.3612 47 1 5.0246 9.0781 7.7242 48 1 4.0256 2.4122 -1.1076 49 1 4.3571 1.2390 0.2395 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:24:06 Heat of formation + Delta-G solvation = -62.352115 kcal Electronic energy + Delta-G solvation = -26856.820568 eV Core-core repulsion = 22877.555404 eV Total energy + Delta-G solvation = -3979.265164 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.154 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.27752 -40.95629 -39.86648 -39.06478 -37.31456 -35.56122 -34.91769 -32.57232 -31.34736 -30.18257 -29.77131 -27.96269 -26.90744 -26.72636 -24.38664 -23.68440 -23.13360 -21.76579 -21.56605 -20.60867 -18.91826 -18.40498 -18.28901 -17.61708 -17.52888 -17.39265 -16.99308 -16.86714 -16.62995 -16.39998 -15.82417 -15.41907 -15.33877 -15.20299 -14.80801 -14.61646 -14.53476 -14.25920 -14.21684 -14.16586 -13.95539 -13.65184 -13.59905 -13.49871 -13.32448 -13.24197 -12.87177 -12.58606 -12.43572 -12.19029 -12.05663 -12.03040 -11.89895 -11.70931 -11.65280 -11.53157 -10.92783 -10.80822 -10.35910 -10.12722 -9.87910 -9.21428 -8.68779 -4.96140 0.22523 0.42440 0.68652 1.27223 1.53977 1.62526 1.65247 1.87961 1.98569 2.32269 2.65953 3.23686 3.27172 3.40061 3.45037 3.57984 3.60270 3.75916 3.77883 3.83807 3.89620 3.98495 3.99454 4.12399 4.13667 4.15867 4.16378 4.19150 4.22341 4.26570 4.29973 4.40632 4.49701 4.52907 4.56698 4.61044 4.65332 4.69504 4.72459 4.81777 4.89419 4.95749 4.98808 5.14103 5.18644 5.27622 5.36631 5.38172 5.46276 5.69560 6.40143 6.42868 6.63335 7.18755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.253 6.253 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.123 4.123 6 C -0.121 4.121 7 H 0.101 0.899 8 C 0.130 3.870 9 N -0.732 5.732 10 C 0.513 3.487 11 O -0.534 6.534 12 C -0.138 4.138 13 C -0.105 4.105 14 C 0.059 3.941 15 O -0.310 6.310 16 C 0.134 3.866 17 C -0.122 4.122 18 C -0.036 4.036 19 C -0.074 4.074 20 O -0.544 6.544 21 Si 0.688 3.312 22 C -0.163 4.163 23 C -0.072 4.072 24 C -0.205 4.205 25 C -0.100 4.100 26 H 0.076 0.924 27 H 0.101 0.899 28 H 0.077 0.923 29 H 0.097 0.903 30 H 0.073 0.927 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.401 0.599 34 H 0.098 0.902 35 H 0.098 0.902 36 H 0.084 0.916 37 H 0.084 0.916 38 H 0.064 0.936 39 H 0.064 0.936 40 H 0.136 0.864 41 H 0.076 0.924 42 H 0.383 0.617 43 H -0.250 1.250 44 H -0.255 1.255 45 H 0.120 0.880 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.083 0.917 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.343 3.052 0.446 5.327 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.025 6.025 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.163 4.163 6 C -0.141 4.141 7 H 0.119 0.881 8 C 0.006 3.994 9 N -0.384 5.384 10 C 0.299 3.701 11 O -0.410 6.410 12 C -0.178 4.178 13 C -0.143 4.143 14 C -0.016 4.016 15 O -0.224 6.224 16 C 0.089 3.911 17 C -0.141 4.141 18 C -0.036 4.036 19 C -0.184 4.184 20 O -0.350 6.350 21 Si 0.589 3.411 22 C -0.181 4.181 23 C -0.090 4.090 24 C -0.224 4.224 25 C -0.140 4.140 26 H 0.095 0.905 27 H 0.120 0.880 28 H 0.096 0.904 29 H 0.116 0.884 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.091 0.909 33 H 0.235 0.765 34 H 0.116 0.884 35 H 0.116 0.884 36 H 0.103 0.897 37 H 0.102 0.898 38 H 0.082 0.918 39 H 0.082 0.918 40 H 0.154 0.846 41 H 0.094 0.906 42 H 0.231 0.769 43 H -0.175 1.175 44 H -0.180 1.180 45 H 0.137 0.863 46 H 0.147 0.853 47 H 0.149 0.851 48 H 0.101 0.899 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -3.809 2.019 0.175 4.314 hybrid contribution -1.859 0.988 -0.704 2.220 sum -5.668 3.007 -0.529 6.438 Atomic orbital electron populations 1.23373 0.94130 1.06655 1.04915 1.87011 1.07557 1.10281 1.97616 1.24709 1.01068 0.94353 1.01176 0.87626 1.23441 0.98069 0.99117 0.95658 1.22757 0.95704 0.98932 0.96739 0.88125 1.21367 0.97982 0.89155 0.90909 1.45995 1.27161 1.32156 1.33091 1.20569 0.82743 0.85958 0.80835 1.90764 1.28098 1.51244 1.70878 1.21525 1.01001 0.97728 0.97510 1.21231 0.99223 0.97942 0.95920 1.22838 0.89649 0.99397 0.89731 1.86087 1.47650 1.46779 1.41835 1.18993 0.94325 0.87790 0.90007 1.20258 0.98874 1.00127 0.94852 1.19122 0.94325 0.94477 0.95675 1.24735 0.86594 1.08171 0.98943 1.86504 1.18051 1.93300 1.37188 0.95349 0.85326 0.78086 0.82361 1.20800 0.96352 1.00015 1.00899 1.20853 0.97960 0.96789 0.93438 1.21294 0.99896 0.98152 1.03037 1.22760 0.93361 0.97922 0.99917 0.90495 0.88040 0.90438 0.88429 0.90851 0.91011 0.90924 0.76494 0.88402 0.88388 0.89745 0.89756 0.91759 0.91765 0.84614 0.90567 0.76944 1.17523 1.17960 0.86293 0.85251 0.85083 0.89851 0.88582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 10.76 101.05 1.09 1.25 16 2 S -0.25 -0.21 22.19 -107.50 -2.39 -2.59 16 3 C -0.08 0.13 4.27 -25.82 -0.11 0.02 16 4 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 5 C -0.12 0.31 7.24 -25.83 -0.19 0.12 16 6 C -0.12 0.37 3.75 -89.81 -0.34 0.03 16 7 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 8 C 0.13 -0.15 5.50 -4.04 -0.02 -0.17 16 9 N -0.73 1.37 5.56 -60.29 -0.33 1.03 16 10 C 0.51 0.35 7.83 -10.99 -0.09 0.26 16 11 O -0.53 -2.93 15.98 5.55 0.09 -2.84 16 12 C -0.14 0.34 5.70 -27.88 -0.16 0.18 16 13 C -0.11 -0.01 4.87 -26.73 -0.13 -0.14 16 14 C 0.06 -0.02 4.74 37.16 0.18 0.16 16 15 O -0.31 -1.01 10.14 -19.44 -0.20 -1.21 16 16 C 0.13 0.47 6.69 -39.22 -0.26 0.20 16 17 C -0.12 -0.48 9.62 -39.43 -0.38 -0.86 16 18 C -0.04 -0.12 5.38 -104.64 -0.56 -0.68 16 19 C -0.07 -0.06 2.79 36.01 0.10 0.04 16 20 O -0.54 -0.58 12.81 -35.23 -0.45 -1.03 16 21 Si 0.69 -0.42 29.85 -169.99 -5.07 -5.49 16 22 C -0.16 -0.50 8.67 -39.56 -0.34 -0.84 16 23 C -0.07 -0.14 10.04 -39.61 -0.40 -0.54 16 24 C -0.21 -0.38 9.04 -39.43 -0.36 -0.74 16 25 C -0.10 0.20 7.23 -25.92 -0.19 0.01 16 26 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 27 H 0.10 -0.17 8.14 -51.92 -0.42 -0.59 16 28 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 29 H 0.10 -0.13 7.88 -51.93 -0.41 -0.54 16 30 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.07 0.02 7.87 -51.93 -0.41 -0.39 16 33 H 0.40 -1.91 8.47 -40.82 -0.35 -2.25 16 34 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 35 H 0.10 -0.43 8.14 -51.93 -0.42 -0.86 16 36 H 0.08 0.14 8.10 -51.93 -0.42 -0.28 16 37 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 38 H 0.06 -0.10 7.65 -51.93 -0.40 -0.50 16 39 H 0.06 -0.11 7.67 -51.93 -0.40 -0.51 16 40 H 0.14 0.47 8.06 -52.49 -0.42 0.04 16 41 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 42 H 0.38 -1.60 8.74 45.56 0.40 -1.20 16 43 H -0.25 -0.62 7.05 56.52 0.40 -0.22 16 44 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 45 H 0.12 0.28 4.86 -52.48 -0.26 0.02 16 46 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 47 H 0.13 -0.09 6.30 -52.48 -0.33 -0.42 16 48 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 49 H 0.10 -0.09 8.06 -51.93 -0.42 -0.51 16 LS Contribution 414.00 15.07 6.24 6.24 Total: 0.00 -9.94 414.00 -12.37 -22.31 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -8.09 Total: -14.72 kcal Atomic # 6 Polarization: 0.47 SS G_CDS: -2.16 Total: -1.68 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.33 Total: 1.03 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -0.56 Total: -5.08 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.07 Total: -5.49 kcal Atomic # 16 Polarization: -0.21 SS G_CDS: -2.39 Total: -2.59 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -9.94 -12.37 -22.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.046 kcal (2) G-P(sol) polarization free energy of solvation -9.940 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds