Wall clock time and date at job start Sun Mar 7 2021 10:18:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35538 * 125.67371 * 2 1 4 4 C 1.35457 * 108.86886 * 179.97438 * 3 2 1 5 5 C 1.50692 * 126.06862 * 179.97438 * 4 3 2 6 6 O 1.42907 * 109.47509 * 119.96876 * 5 4 3 7 7 Si 1.86301 * 109.47192 * 359.97284 * 5 4 3 8 8 H 1.48500 * 109.47360 * 59.99852 * 7 5 4 9 9 H 1.48499 * 109.47311 * 180.02562 * 7 5 4 10 10 H 1.48509 * 109.46969 * 299.99993 * 7 5 4 11 11 C 1.39840 * 107.86231 * 359.73656 * 4 3 2 12 12 C 1.37648 * 125.67868 * 179.97438 * 2 1 3 13 13 C 1.46672 * 126.23186 * 0.02562 * 12 2 1 14 14 O 1.21687 * 120.00679 * 6.00978 * 13 12 2 15 15 N 1.34781 * 119.99671 * 186.00830 * 13 12 2 16 16 C 1.47583 * 134.48923 * 175.71410 * 15 13 12 17 17 C 1.53950 * 86.11554 * 204.63449 * 16 15 13 18 18 O 1.42897 * 113.74262 * 222.04675 * 17 16 15 19 19 Si 1.63100 * 113.99966 * 209.99918 * 18 17 16 20 20 C 1.86305 * 109.46960 * 299.99772 * 19 18 17 21 21 C 1.86299 * 109.47408 * 59.99593 * 19 18 17 22 22 C 1.86302 * 109.47170 * 179.97438 * 19 18 17 23 23 C 1.53005 * 109.47057 * 59.99955 * 22 19 18 24 24 C 1.53001 * 109.46987 * 179.97438 * 22 19 18 25 25 C 1.53001 * 109.46784 * 299.99769 * 22 19 18 26 26 C 1.47579 * 134.49681 * 355.70046 * 15 13 12 27 27 H 1.09006 * 109.47163 * 274.79647 * 1 2 3 28 28 H 1.09001 * 109.46928 * 34.79309 * 1 2 3 29 29 H 1.09001 * 109.47315 * 154.79967 * 1 2 3 30 30 H 1.07994 * 125.56697 * 359.97438 * 3 2 1 31 31 H 1.08998 * 109.47645 * 239.97332 * 5 4 3 32 32 H 0.96700 * 113.99803 * 300.00418 * 6 5 4 33 33 H 1.07995 * 126.45484 * 180.27103 * 11 4 3 34 34 H 1.08998 * 113.77729 * 90.33327 * 16 15 13 35 35 H 1.09002 * 113.76876 * 318.93037 * 16 15 13 36 36 H 1.09002 * 113.74463 * 90.73108 * 17 16 15 37 37 H 1.08997 * 109.47033 * 60.00370 * 20 19 18 38 38 H 1.08997 * 109.46830 * 180.02562 * 20 19 18 39 39 H 1.08999 * 109.47212 * 299.99890 * 20 19 18 40 40 H 1.09000 * 109.46745 * 60.00090 * 21 19 18 41 41 H 1.08997 * 109.47420 * 179.97438 * 21 19 18 42 42 H 1.09000 * 109.47466 * 300.00695 * 21 19 18 43 43 H 1.09000 * 109.47146 * 60.00055 * 23 22 19 44 44 H 1.08997 * 109.46568 * 180.02562 * 23 22 19 45 45 H 1.09003 * 109.46780 * 299.99611 * 23 22 19 46 46 H 1.08999 * 109.46984 * 59.99999 * 24 22 19 47 47 H 1.09004 * 109.46823 * 179.97438 * 24 22 19 48 48 H 1.09000 * 109.47361 * 300.00033 * 24 22 19 49 49 H 1.08997 * 109.46948 * 60.00111 * 25 22 19 50 50 H 1.09007 * 109.46635 * 180.02562 * 25 22 19 51 51 H 1.08998 * 109.47037 * 299.99690 * 25 22 19 52 52 H 1.09000 * 113.76370 * 41.06636 * 26 15 13 53 53 H 1.09003 * 113.77357 * 269.66991 * 26 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5522 0.7094 0.0006 5 6 4.7536 1.6190 0.0002 6 8 5.5395 1.3707 1.1677 7 14 4.1886 3.3942 -0.0020 8 1 3.3708 3.6550 1.2098 9 1 5.3726 4.2906 -0.0029 10 1 3.3720 3.6523 -1.2152 11 6 3.5780 -0.6887 0.0071 12 6 2.2678 -1.1181 0.0005 13 6 1.8124 -2.5123 0.0006 14 8 0.6273 -2.7654 -0.1101 15 7 2.7066 -3.5133 0.1233 16 6 2.6064 -4.9810 0.2406 17 6 3.9768 -4.9139 0.9389 18 8 4.8807 -5.9434 0.5324 19 14 5.9403 -6.3905 1.6889 20 6 6.9701 -4.9208 2.1893 21 6 5.0093 -7.0298 3.1706 22 6 7.0513 -7.7320 1.0281 23 6 7.8160 -7.2075 -0.1889 24 6 8.0457 -8.1510 2.1128 25 6 6.2051 -8.9388 0.6176 26 6 4.1791 -3.5819 0.1940 27 1 -0.3634 0.0859 1.0241 28 1 -0.3633 0.8440 -0.5864 29 1 -0.3634 -0.9298 -0.4376 30 1 1.9081 2.1236 -0.0004 31 1 5.3540 1.4277 -0.8892 32 1 5.0679 1.5211 1.9985 33 1 4.4583 -1.3143 0.0132 34 1 2.6264 -5.5008 -0.7173 35 1 1.7980 -5.3156 0.8908 36 1 3.9129 -4.8059 2.0216 37 1 6.3198 -4.1363 2.5761 38 1 7.6785 -5.2197 2.9619 39 1 7.5148 -4.5468 1.3225 40 1 4.4068 -7.8896 2.8778 41 1 5.7174 -7.3290 3.9433 42 1 4.3589 -6.2452 3.5574 43 1 8.4188 -6.3478 0.1035 44 1 8.4657 -7.9926 -0.5757 45 1 7.1078 -6.9088 -0.9618 46 1 7.5013 -8.5245 2.9801 47 1 8.6955 -8.9362 1.7263 48 1 8.6485 -7.2911 2.4049 49 1 5.4970 -8.6400 -0.1552 50 1 6.8553 -9.7239 0.2314 51 1 5.6605 -9.3124 1.4847 52 1 4.6264 -2.7994 0.8070 53 1 4.6611 -3.6906 -0.7775 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18362370_10803934.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:18:56 Heat of formation + Delta-G solvation = -72.092207 kcal Electronic energy + Delta-G solvation = -30550.684395 eV Core-core repulsion = 26548.201890 eV Total energy + Delta-G solvation = -4002.482506 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 354.193 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.59013 -41.16123 -38.98315 -37.68057 -36.88594 -36.51892 -33.97350 -31.65789 -29.64630 -29.25837 -29.14850 -28.39778 -27.90692 -27.47385 -27.18551 -25.69490 -23.94001 -21.97510 -21.09523 -20.43920 -19.89147 -18.75294 -18.36278 -17.92842 -17.13674 -16.80619 -16.57739 -16.07650 -16.04943 -15.72104 -15.64619 -15.30650 -15.08369 -14.89623 -14.77029 -14.62043 -14.51234 -14.15406 -14.05856 -13.89455 -13.68574 -13.53122 -13.47325 -13.32152 -13.26946 -13.25078 -13.12450 -12.97742 -12.96367 -12.85427 -12.44199 -12.36672 -12.13747 -11.85147 -11.76538 -11.74899 -11.58404 -11.42108 -10.97578 -10.43892 -10.34351 -10.13202 -9.87307 -9.67466 -9.24708 0.43671 1.11376 1.20148 1.43413 1.48567 1.52379 1.60702 1.65437 1.94784 1.95746 2.06245 2.30920 2.41347 3.17698 3.32104 3.57756 3.67186 3.78480 3.86542 3.92198 4.07650 4.07787 4.15500 4.18424 4.25953 4.38754 4.42961 4.43999 4.48766 4.53179 4.61198 4.62108 4.67910 4.68151 4.68952 4.72085 4.73983 4.77658 4.81822 4.82437 4.96168 5.06684 5.07098 5.15351 5.18656 5.30020 5.35756 5.37876 5.45393 5.49407 5.55688 5.69152 5.90330 6.11123 6.52774 6.65448 7.08932 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.404 5.404 3 C 0.021 3.979 4 C -0.209 4.209 5 C -0.043 4.043 6 O -0.541 6.541 7 Si 0.943 3.057 8 H -0.253 1.253 9 H -0.252 1.252 10 H -0.252 1.252 11 C -0.114 4.114 12 C -0.049 4.049 13 C 0.618 3.382 14 O -0.545 6.545 15 N -0.634 5.634 16 C 0.113 3.887 17 C 0.079 3.921 18 O -0.607 6.607 19 Si 1.285 2.715 20 C -0.510 4.510 21 C -0.512 4.512 22 C -0.374 4.374 23 C -0.135 4.135 24 C -0.137 4.137 25 C -0.135 4.135 26 C 0.078 3.922 27 H 0.078 0.922 28 H 0.085 0.915 29 H 0.110 0.890 30 H 0.168 0.832 31 H 0.115 0.885 32 H 0.374 0.626 33 H 0.152 0.848 34 H 0.102 0.898 35 H 0.090 0.910 36 H 0.100 0.900 37 H 0.067 0.933 38 H 0.075 0.925 39 H 0.075 0.925 40 H 0.073 0.927 41 H 0.075 0.925 42 H 0.066 0.934 43 H 0.055 0.945 44 H 0.053 0.947 45 H 0.060 0.940 46 H 0.056 0.944 47 H 0.056 0.944 48 H 0.057 0.943 49 H 0.060 0.940 50 H 0.053 0.947 51 H 0.054 0.946 52 H 0.097 0.903 53 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.442 0.672 1.491 2.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.076 5.076 3 C -0.116 4.116 4 C -0.215 4.215 5 C -0.155 4.155 6 O -0.346 6.346 7 Si 0.766 3.234 8 H -0.177 1.177 9 H -0.176 1.176 10 H -0.176 1.176 11 C -0.140 4.140 12 C -0.162 4.162 13 C 0.410 3.590 14 O -0.424 6.424 15 N -0.371 5.371 16 C -0.009 4.009 17 C 0.021 3.979 18 O -0.564 6.564 19 Si 1.417 2.583 20 C -0.612 4.612 21 C -0.614 4.614 22 C -0.418 4.418 23 C -0.192 4.192 24 C -0.194 4.194 25 C -0.192 4.192 26 C -0.044 4.044 27 H 0.097 0.903 28 H 0.104 0.896 29 H 0.129 0.871 30 H 0.185 0.815 31 H 0.132 0.868 32 H 0.221 0.779 33 H 0.170 0.830 34 H 0.120 0.880 35 H 0.109 0.891 36 H 0.118 0.882 37 H 0.086 0.914 38 H 0.094 0.906 39 H 0.094 0.906 40 H 0.093 0.907 41 H 0.094 0.906 42 H 0.085 0.915 43 H 0.074 0.926 44 H 0.072 0.928 45 H 0.079 0.921 46 H 0.075 0.925 47 H 0.075 0.925 48 H 0.076 0.924 49 H 0.079 0.921 50 H 0.072 0.928 51 H 0.073 0.927 52 H 0.115 0.885 53 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 0.336 1.323 0.687 1.528 hybrid contribution -0.068 -0.309 0.770 0.833 sum 0.267 1.014 1.457 1.795 Atomic orbital electron populations 1.22442 0.75555 1.06251 1.04063 1.43801 1.07016 1.04623 1.52167 1.21852 0.90303 0.91670 1.07779 1.19817 0.93609 0.95061 1.13051 1.24240 0.92692 1.07066 0.91456 1.86491 1.40608 1.92108 1.15381 0.85833 0.80516 0.75640 0.81441 1.17653 1.17562 1.17562 1.21481 0.94594 0.94493 1.03452 1.19870 0.90366 0.87167 1.18804 1.16428 0.84263 0.82566 0.75728 1.90795 1.15961 1.84296 1.51357 1.49122 1.07705 1.06974 1.73274 1.23486 0.96512 0.79142 1.01794 1.23582 0.89791 0.86464 0.98042 1.85452 1.53847 1.54514 1.62583 0.76799 0.60062 0.64729 0.56757 1.27053 1.11169 1.16571 1.06433 1.27059 1.09490 1.07153 1.17685 1.25787 1.05727 1.09395 1.00896 1.21521 0.99948 1.00811 0.96892 1.21561 0.98666 1.01524 0.97696 1.21521 0.99373 0.97027 1.01268 1.24072 0.80970 0.97102 1.02302 0.90298 0.89634 0.87120 0.81476 0.86764 0.77868 0.83042 0.88003 0.89121 0.88236 0.91359 0.90631 0.90632 0.90744 0.90578 0.91491 0.92600 0.92793 0.92125 0.92533 0.92476 0.92447 0.92110 0.92778 0.92699 0.88517 0.87691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.00 10.78 59.85 0.65 0.64 16 2 N -0.40 -0.71 3.16 -120.23 -0.38 -1.09 16 3 C 0.02 0.01 9.94 -16.91 -0.17 -0.16 16 4 C -0.21 -0.13 5.44 -105.02 -0.57 -0.70 16 5 C -0.04 0.03 3.02 36.00 0.11 0.13 16 6 O -0.54 0.00 12.88 -35.23 -0.45 -0.45 16 7 Si 0.94 -0.95 25.87 -169.99 -4.40 -5.34 16 8 H -0.25 0.22 7.11 56.52 0.40 0.62 16 9 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 10 H -0.25 0.11 7.11 56.52 0.40 0.51 16 11 C -0.11 -0.14 9.83 -39.12 -0.38 -0.52 16 12 C -0.05 -0.13 6.88 -81.98 -0.56 -0.69 16 13 C 0.62 2.28 8.01 -12.85 -0.10 2.18 16 14 O -0.54 -3.51 15.29 5.20 0.08 -3.43 16 15 N -0.63 -0.65 3.61 -180.17 -0.65 -1.30 16 16 C 0.11 -0.06 8.67 -2.97 -0.03 -0.08 16 17 C 0.08 -0.15 3.74 -25.80 -0.10 -0.25 16 18 O -0.61 0.99 8.58 -35.23 -0.30 0.68 16 19 Si 1.28 -3.12 8.25 -169.99 -1.40 -4.52 16 20 C -0.51 1.07 8.65 101.05 0.87 1.95 16 21 C -0.51 0.90 8.63 101.05 0.87 1.77 16 22 C -0.37 0.50 0.53 -90.62 -0.05 0.45 16 23 C -0.13 0.13 7.85 37.16 0.29 0.42 16 24 C -0.14 0.19 7.85 37.16 0.29 0.48 16 25 C -0.13 0.11 7.85 37.16 0.29 0.40 16 26 C 0.08 -0.13 7.00 -2.98 -0.02 -0.15 16 27 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 29 H 0.11 0.20 5.96 -51.93 -0.31 -0.11 16 30 H 0.17 -0.31 6.19 -52.49 -0.32 -0.63 16 31 H 0.11 -0.13 7.96 -51.93 -0.41 -0.55 16 32 H 0.37 -1.12 8.70 45.56 0.40 -0.72 16 33 H 0.15 -0.06 5.14 -52.49 -0.27 -0.33 16 34 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 35 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.10 -0.33 6.45 -51.93 -0.34 -0.67 16 37 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 38 H 0.07 -0.15 7.79 -51.93 -0.40 -0.56 16 39 H 0.07 -0.15 7.79 -51.93 -0.40 -0.55 16 40 H 0.07 -0.11 7.79 -51.93 -0.40 -0.51 16 41 H 0.08 -0.14 7.79 -51.93 -0.40 -0.54 16 42 H 0.07 -0.13 7.28 -51.93 -0.38 -0.51 16 43 H 0.05 -0.09 7.80 -51.93 -0.40 -0.49 16 44 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 45 H 0.06 -0.06 7.97 -51.93 -0.41 -0.47 16 46 H 0.06 -0.11 7.79 -51.93 -0.40 -0.51 16 47 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 48 H 0.06 -0.11 7.79 -51.93 -0.40 -0.52 16 49 H 0.06 -0.05 7.96 -51.93 -0.41 -0.46 16 50 H 0.05 -0.02 8.14 -51.92 -0.42 -0.44 16 51 H 0.05 -0.07 7.79 -51.93 -0.40 -0.48 16 52 H 0.10 -0.28 6.20 -51.93 -0.32 -0.60 16 53 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 LS Contribution 418.84 15.07 6.31 6.31 Total: 0.00 -7.44 418.84 -8.41 -15.85 By element: Atomic # 1 Polarization: -3.95 SS G_CDS: -8.61 Total: -12.56 kcal Atomic # 6 Polarization: 4.47 SS G_CDS: 1.39 Total: 5.86 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -1.03 Total: -2.39 kcal Atomic # 8 Polarization: -2.53 SS G_CDS: -0.68 Total: -3.20 kcal Atomic # 14 Polarization: -4.06 SS G_CDS: -5.80 Total: -9.86 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -7.44 -8.41 -15.85 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_10803934.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.243 kcal (2) G-P(sol) polarization free energy of solvation -7.437 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.680 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.413 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.849 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds