Wall clock time and date at job start Sun Mar 7 2021 10:32:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47450 * 2 1 4 4 C 1.52998 * 109.47215 * 239.99669 * 2 1 3 5 5 Si 1.86308 * 109.46928 * 120.00057 * 2 1 3 6 6 C 1.86298 * 109.46941 * 299.99699 * 5 2 1 7 7 C 1.86301 * 109.47105 * 179.97438 * 5 2 1 8 8 O 1.63095 * 109.46947 * 59.99656 * 5 2 1 9 9 C 1.42909 * 113.99823 * 180.02562 * 8 5 2 10 10 C 1.53945 * 113.74249 * 210.00138 * 9 8 5 11 11 N 1.47579 * 86.11783 * 222.04953 * 10 9 8 12 12 C 1.34767 * 134.49250 * 204.64521 * 11 10 9 13 13 O 1.21573 * 120.00377 * 355.73520 * 12 11 10 14 14 C 1.47696 * 120.00264 * 175.73357 * 12 11 10 15 15 C 1.39624 * 120.16023 * 32.80426 * 14 12 11 16 16 C 1.37899 * 119.87533 * 180.02562 * 15 14 12 17 17 C 1.50702 * 119.89247 * 179.97438 * 16 15 14 18 18 O 1.42900 * 109.47086 * 64.99525 * 17 16 15 19 19 Si 1.86294 * 109.47393 * 184.99798 * 17 16 15 20 20 H 1.48500 * 109.47180 * 59.99325 * 19 17 16 21 21 H 1.48496 * 109.47411 * 179.97438 * 19 17 16 22 22 H 1.48511 * 109.47039 * 299.99779 * 19 17 16 23 23 C 1.38420 * 120.21824 * 359.97333 * 16 15 14 24 24 C 1.38243 * 120.33810 * 0.02562 * 23 16 15 25 25 C 1.38281 * 120.11919 * 359.72397 * 24 23 16 26 26 F 1.35094 * 120.11072 * 180.27476 * 25 24 23 27 27 C 1.47576 * 91.01544 * 24.63727 * 11 10 9 28 28 H 1.09004 * 109.47143 * 300.00171 * 1 2 3 29 29 H 1.08993 * 109.47007 * 59.99894 * 1 2 3 30 30 H 1.08995 * 109.47746 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47250 * 179.97438 * 3 2 1 32 32 H 1.08999 * 109.47169 * 299.99636 * 3 2 1 33 33 H 1.09004 * 109.47087 * 59.99795 * 3 2 1 34 34 H 1.09004 * 109.47216 * 300.00628 * 4 2 1 35 35 H 1.08999 * 109.46681 * 59.99898 * 4 2 1 36 36 H 1.08993 * 109.47722 * 180.02562 * 4 2 1 37 37 H 1.08999 * 109.47165 * 179.97438 * 6 5 2 38 38 H 1.09004 * 109.47282 * 299.99808 * 6 5 2 39 39 H 1.09001 * 109.47028 * 60.00117 * 6 5 2 40 40 H 1.09004 * 109.47279 * 299.99962 * 7 5 2 41 41 H 1.09001 * 109.46781 * 59.99875 * 7 5 2 42 42 H 1.08999 * 109.46814 * 179.97438 * 7 5 2 43 43 H 1.08997 * 113.01508 * 341.66070 * 9 8 5 44 44 H 1.09001 * 113.76726 * 336.34650 * 10 9 8 45 45 H 1.09002 * 113.76899 * 107.74306 * 10 9 8 46 46 H 1.07997 * 120.06704 * 0.02562 * 15 14 12 47 47 H 1.08999 * 109.46725 * 304.99645 * 17 16 15 48 48 H 0.96694 * 114.00208 * 60.00242 * 18 17 16 49 49 H 1.08006 * 119.83079 * 180.02562 * 23 16 15 50 50 H 1.08010 * 119.94147 * 180.02562 * 24 23 16 51 51 H 1.09003 * 113.77221 * 221.05996 * 27 11 10 52 52 H 1.09001 * 113.77051 * 89.66570 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 14 2.1509 -0.8783 1.5212 6 6 1.5300 0.0000 3.0423 7 6 4.0140 -0.8790 1.5209 8 8 1.6072 -2.4159 1.5212 9 6 2.0283 -3.1814 2.6521 10 6 2.1810 -4.6853 2.3606 11 7 1.5332 -4.9023 3.6688 12 6 1.5386 -5.9035 4.5709 13 8 2.1297 -6.9377 4.3277 14 6 0.8265 -5.7445 5.8550 15 6 -0.3412 -4.9817 5.9198 16 6 -1.0011 -4.8367 7.1220 17 6 -2.2611 -4.0131 7.1925 18 8 -3.2829 -4.6379 6.4130 19 14 -2.8220 -3.8864 8.9645 20 1 -1.7601 -3.2372 9.7746 21 1 -4.0632 -3.0743 9.0341 22 1 -3.0892 -5.2466 9.4975 23 6 -0.5099 -5.4452 8.2641 24 6 0.6454 -6.2024 8.2101 25 6 1.3155 -6.3614 7.0110 26 9 2.4414 -7.1059 6.9573 27 6 0.8774 -3.5824 3.5925 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 3.1301 1.4424 0.0005 32 1 1.6768 1.9562 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7490 -1.2492 35 1 1.6766 -0.2075 -2.1391 36 1 3.1299 -0.7218 -1.2490 37 1 1.8929 -0.5141 3.9323 38 1 1.8934 1.0277 3.0423 39 1 0.4400 0.0001 3.0423 40 1 4.3770 -1.3931 0.6309 41 1 4.3776 0.1486 1.5206 42 1 4.3772 -1.3925 2.4111 43 1 2.8842 -2.7452 3.1672 44 1 1.5878 -5.0311 1.5140 45 1 3.2168 -5.0224 2.3219 46 1 -0.7269 -4.5062 5.0302 47 1 -2.0650 -3.0148 6.8013 48 1 -3.5094 -5.5314 6.7050 49 1 -1.0320 -5.3278 9.2023 50 1 1.0227 -6.6748 9.1052 51 1 0.8724 -3.0390 4.5374 52 1 -0.0987 -3.6042 3.1078 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18362370_12335834.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:32:26 Heat of formation + Delta-G solvation = -140.661568 kcal Electronic energy + Delta-G solvation = -32373.310044 eV Core-core repulsion = 27991.137562 eV Total energy + Delta-G solvation = -4382.172482 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 369.173 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -49.92657 -41.74123 -40.49548 -39.07863 -37.58727 -36.91784 -36.53920 -33.06619 -32.41654 -29.93222 -29.41923 -29.19881 -27.94076 -27.58340 -27.35198 -26.73505 -25.35962 -23.36054 -22.46340 -20.51242 -20.41516 -18.93742 -18.70722 -18.50235 -18.38685 -17.45828 -17.18791 -16.74551 -16.32273 -16.20479 -16.07404 -15.95689 -15.67969 -15.36704 -15.08681 -14.99083 -14.86173 -14.73340 -14.43445 -14.34168 -14.14419 -14.04094 -13.82757 -13.69522 -13.53618 -13.38443 -13.35746 -13.22979 -13.00933 -13.00368 -12.91258 -12.83014 -12.47338 -12.42526 -12.27468 -11.91856 -11.80811 -11.79014 -11.64161 -11.48213 -11.07121 -10.60516 -10.50005 -10.37899 -10.16780 -9.94376 -9.80318 -0.48706 -0.11964 0.96592 1.11633 1.28112 1.35594 1.56975 1.61368 1.71702 1.77322 1.91268 2.29079 2.36226 2.96106 3.06937 3.17027 3.23654 3.38273 3.49201 3.62798 3.77328 3.87259 4.01458 4.04502 4.04635 4.14185 4.27015 4.33038 4.35267 4.40896 4.46473 4.53177 4.57021 4.58647 4.63008 4.63364 4.67295 4.67422 4.74591 4.78942 4.82759 4.85454 4.93116 5.01973 5.03799 5.04212 5.12015 5.26904 5.30878 5.34495 5.42365 5.44934 5.51093 5.51471 6.36928 6.46158 7.00571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.135 4.135 5 Si 1.284 2.716 6 C -0.510 4.510 7 C -0.512 4.512 8 O -0.606 6.606 9 C 0.080 3.920 10 C 0.110 3.890 11 N -0.639 5.639 12 C 0.588 3.412 13 O -0.516 6.516 14 C -0.165 4.165 15 C -0.032 4.032 16 C -0.139 4.139 17 C -0.079 4.079 18 O -0.536 6.536 19 Si 0.945 3.055 20 H -0.247 1.247 21 H -0.249 1.249 22 H -0.249 1.249 23 C -0.071 4.071 24 C -0.153 4.153 25 C 0.161 3.839 26 F -0.116 7.116 27 C 0.077 3.923 28 H 0.054 0.946 29 H 0.053 0.947 30 H 0.060 0.940 31 H 0.056 0.944 32 H 0.057 0.943 33 H 0.056 0.944 34 H 0.060 0.940 35 H 0.054 0.946 36 H 0.054 0.946 37 H 0.066 0.934 38 H 0.075 0.925 39 H 0.074 0.926 40 H 0.074 0.926 41 H 0.075 0.925 42 H 0.066 0.934 43 H 0.100 0.900 44 H 0.103 0.897 45 H 0.091 0.909 46 H 0.144 0.856 47 H 0.122 0.878 48 H 0.379 0.621 49 H 0.136 0.864 50 H 0.149 0.851 51 H 0.091 0.909 52 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.242 5.082 1.940 5.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.418 4.418 3 C -0.195 4.195 4 C -0.192 4.192 5 Si 1.416 2.584 6 C -0.612 4.612 7 C -0.614 4.614 8 O -0.563 6.563 9 C 0.022 3.978 10 C -0.012 4.012 11 N -0.377 5.377 12 C 0.377 3.623 13 O -0.392 6.392 14 C -0.169 4.169 15 C -0.050 4.050 16 C -0.140 4.140 17 C -0.190 4.190 18 O -0.341 6.341 19 Si 0.767 3.233 20 H -0.171 1.171 21 H -0.173 1.173 22 H -0.173 1.173 23 C -0.089 4.089 24 C -0.171 4.171 25 C 0.141 3.859 26 F -0.094 7.094 27 C -0.046 4.046 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.079 0.921 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.075 0.925 34 H 0.079 0.921 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.085 0.915 38 H 0.094 0.906 39 H 0.093 0.907 40 H 0.093 0.907 41 H 0.094 0.906 42 H 0.085 0.915 43 H 0.118 0.882 44 H 0.121 0.879 45 H 0.110 0.890 46 H 0.162 0.838 47 H 0.140 0.860 48 H 0.226 0.774 49 H 0.154 0.846 50 H 0.167 0.833 51 H 0.110 0.890 52 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -2.269 4.762 2.327 5.765 hybrid contribution 0.599 -0.203 -0.048 0.635 sum -1.669 4.559 2.279 5.364 Atomic orbital electron populations 1.21518 0.93722 1.02043 1.01882 1.25780 1.00738 1.02641 1.12614 1.21561 1.00794 0.94884 1.02214 1.21521 1.00642 1.00267 0.96784 0.76810 0.63099 0.53246 0.65254 1.27054 1.07151 1.09625 1.17391 1.27060 1.24856 1.04897 1.04592 1.85458 1.78570 1.46270 1.46046 1.23573 0.96334 0.91989 0.85906 1.23496 0.99961 0.92104 0.85649 1.49428 1.49866 1.18042 1.20386 1.17523 0.80282 0.81823 0.82641 1.90884 1.44042 1.26199 1.78047 1.19947 0.99470 1.04315 0.93203 1.21173 0.91607 0.93914 0.98323 1.20331 0.98889 1.01303 0.93484 1.24985 0.86168 0.98528 1.09292 1.86536 1.55225 1.34225 1.58138 0.85732 0.81526 0.81863 0.74157 1.17085 1.17311 1.17268 1.21138 0.94981 0.94564 0.98243 1.21119 0.96705 1.02144 0.97179 1.17691 0.83937 0.91015 0.93260 1.91610 1.47723 1.73103 1.96960 1.23991 0.98783 0.81606 1.00206 0.92652 0.92754 0.92109 0.92515 0.92440 0.92489 0.92098 0.92742 0.92678 0.91466 0.90579 0.90655 0.90683 0.90574 0.91499 0.88235 0.87924 0.89033 0.83794 0.85997 0.77380 0.84644 0.83291 0.89050 0.87611 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.17 7.85 37.16 0.29 0.47 16 2 C -0.37 0.59 0.53 -90.62 -0.05 0.55 16 3 C -0.14 0.22 7.85 37.15 0.29 0.52 16 4 C -0.14 0.13 7.85 37.16 0.29 0.43 16 5 Si 1.28 -3.50 8.25 -169.99 -1.40 -4.90 16 6 C -0.51 1.37 8.65 101.05 0.87 2.24 16 7 C -0.51 0.98 8.63 101.05 0.87 1.85 16 8 O -0.61 1.16 8.58 -35.23 -0.30 0.86 16 9 C 0.08 -0.17 3.74 -25.81 -0.10 -0.27 16 10 C 0.11 -0.05 8.67 -2.98 -0.03 -0.08 16 11 N -0.64 -0.55 3.60 -179.81 -0.65 -1.20 16 12 C 0.59 2.33 7.65 -12.40 -0.09 2.23 16 13 O -0.52 -4.19 16.72 5.30 0.09 -4.11 16 14 C -0.17 -0.33 5.78 -104.91 -0.61 -0.93 16 15 C -0.03 0.02 8.29 -39.19 -0.32 -0.30 16 16 C -0.14 0.23 5.35 -104.68 -0.56 -0.33 16 17 C -0.08 0.22 2.80 36.01 0.10 0.32 16 18 O -0.54 0.96 12.83 -35.23 -0.45 0.51 16 19 Si 0.95 -2.52 25.13 -169.99 -4.27 -6.79 16 20 H -0.25 0.55 7.11 56.52 0.40 0.95 16 21 H -0.25 0.23 7.11 56.52 0.40 0.63 16 22 H -0.25 0.62 7.04 56.52 0.40 1.02 16 23 C -0.07 0.12 8.66 -39.51 -0.34 -0.22 16 24 C -0.15 0.07 10.01 -39.56 -0.40 -0.33 16 25 C 0.16 0.38 7.24 -38.96 -0.28 0.09 16 26 F -0.12 -0.56 16.05 2.25 0.04 -0.53 16 27 C 0.08 -0.18 6.25 -2.98 -0.02 -0.20 16 28 H 0.05 -0.11 7.79 -51.93 -0.40 -0.51 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.06 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H 0.06 -0.12 7.79 -51.93 -0.40 -0.52 16 32 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.06 -0.13 7.79 -51.93 -0.40 -0.54 16 34 H 0.06 -0.06 7.97 -51.93 -0.41 -0.47 16 35 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.05 -0.08 7.79 -51.93 -0.40 -0.48 16 37 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 38 H 0.08 -0.20 7.79 -51.93 -0.40 -0.60 16 39 H 0.07 -0.20 7.79 -51.93 -0.40 -0.61 16 40 H 0.07 -0.11 7.79 -51.93 -0.40 -0.52 16 41 H 0.08 -0.15 7.79 -51.93 -0.40 -0.56 16 42 H 0.07 -0.14 7.28 -51.93 -0.38 -0.52 16 43 H 0.10 -0.36 6.45 -51.93 -0.34 -0.69 16 44 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.14 -0.29 6.05 -52.49 -0.32 -0.61 16 47 H 0.12 -0.50 7.96 -51.93 -0.41 -0.91 16 48 H 0.38 -1.77 8.70 45.56 0.40 -1.37 16 49 H 0.14 -0.47 4.84 -52.48 -0.25 -0.72 16 50 H 0.15 -0.35 8.06 -52.48 -0.42 -0.78 16 51 H 0.09 -0.36 7.64 -51.93 -0.40 -0.76 16 52 H 0.11 -0.35 8.03 -51.93 -0.42 -0.77 16 LS Contribution 420.15 15.07 6.33 6.33 Total: 0.00 -8.01 420.15 -8.62 -16.63 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -7.93 Total: -12.83 kcal Atomic # 6 Polarization: 6.10 SS G_CDS: -0.07 Total: 6.03 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.65 Total: -1.20 kcal Atomic # 8 Polarization: -2.07 SS G_CDS: -0.67 Total: -2.74 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -6.02 SS G_CDS: -5.67 Total: -11.70 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -8.01 -8.62 -16.63 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_12335834.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.031 kcal (2) G-P(sol) polarization free energy of solvation -8.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.631 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds