Wall clock time and date at job start Sun Mar 7 2021 10:32:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47450 * 2 1 4 4 C 1.52998 * 109.47215 * 239.99669 * 2 1 3 5 5 Si 1.86308 * 109.46928 * 120.00057 * 2 1 3 6 6 C 1.86298 * 109.46941 * 299.99699 * 5 2 1 7 7 C 1.86301 * 109.47105 * 179.97438 * 5 2 1 8 8 O 1.63095 * 109.46947 * 59.99656 * 5 2 1 9 9 C 1.42909 * 113.99823 * 180.02562 * 8 5 2 10 10 C 1.53945 * 113.74249 * 210.00138 * 9 8 5 11 11 N 1.47579 * 86.11783 * 222.04953 * 10 9 8 12 12 C 1.34767 * 134.49250 * 204.64521 * 11 10 9 13 13 O 1.21573 * 120.00377 * 355.73520 * 12 11 10 14 14 C 1.47696 * 120.00264 * 175.73357 * 12 11 10 15 15 C 1.39624 * 120.16023 * 32.80426 * 14 12 11 16 16 C 1.37899 * 119.87533 * 180.02562 * 15 14 12 17 17 C 1.50702 * 119.89247 * 179.97438 * 16 15 14 18 18 O 1.42900 * 109.47086 * 64.99525 * 17 16 15 19 19 Si 1.86294 * 109.47393 * 184.99798 * 17 16 15 20 20 H 1.48500 * 109.47180 * 59.99325 * 19 17 16 21 21 H 1.48496 * 109.47411 * 179.97438 * 19 17 16 22 22 H 1.48511 * 109.47039 * 299.99779 * 19 17 16 23 23 C 1.38420 * 120.21824 * 359.97333 * 16 15 14 24 24 C 1.38243 * 120.33810 * 0.02562 * 23 16 15 25 25 C 1.38281 * 120.11919 * 359.72397 * 24 23 16 26 26 F 1.35094 * 120.11072 * 180.27476 * 25 24 23 27 27 C 1.47576 * 91.01544 * 24.63727 * 11 10 9 28 28 H 1.09004 * 109.47143 * 300.00171 * 1 2 3 29 29 H 1.08993 * 109.47007 * 59.99894 * 1 2 3 30 30 H 1.08995 * 109.47746 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47250 * 179.97438 * 3 2 1 32 32 H 1.08999 * 109.47169 * 299.99636 * 3 2 1 33 33 H 1.09004 * 109.47087 * 59.99795 * 3 2 1 34 34 H 1.09004 * 109.47216 * 300.00628 * 4 2 1 35 35 H 1.08999 * 109.46681 * 59.99898 * 4 2 1 36 36 H 1.08993 * 109.47722 * 180.02562 * 4 2 1 37 37 H 1.08999 * 109.47165 * 179.97438 * 6 5 2 38 38 H 1.09004 * 109.47282 * 299.99808 * 6 5 2 39 39 H 1.09001 * 109.47028 * 60.00117 * 6 5 2 40 40 H 1.09004 * 109.47279 * 299.99962 * 7 5 2 41 41 H 1.09001 * 109.46781 * 59.99875 * 7 5 2 42 42 H 1.08999 * 109.46814 * 179.97438 * 7 5 2 43 43 H 1.08997 * 113.01508 * 341.66070 * 9 8 5 44 44 H 1.09001 * 113.76726 * 336.34650 * 10 9 8 45 45 H 1.09002 * 113.76899 * 107.74306 * 10 9 8 46 46 H 1.07997 * 120.06704 * 0.02562 * 15 14 12 47 47 H 1.08999 * 109.46725 * 304.99645 * 17 16 15 48 48 H 0.96694 * 114.00208 * 60.00242 * 18 17 16 49 49 H 1.08006 * 119.83079 * 180.02562 * 23 16 15 50 50 H 1.08010 * 119.94147 * 180.02562 * 24 23 16 51 51 H 1.09003 * 113.77221 * 221.05996 * 27 11 10 52 52 H 1.09001 * 113.77051 * 89.66570 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 14 2.1509 -0.8783 1.5212 6 6 1.5300 0.0000 3.0423 7 6 4.0140 -0.8790 1.5209 8 8 1.6072 -2.4159 1.5212 9 6 2.0283 -3.1814 2.6521 10 6 2.1810 -4.6853 2.3606 11 7 1.5332 -4.9023 3.6688 12 6 1.5386 -5.9035 4.5709 13 8 2.1297 -6.9377 4.3277 14 6 0.8265 -5.7445 5.8550 15 6 -0.3412 -4.9817 5.9198 16 6 -1.0011 -4.8367 7.1220 17 6 -2.2611 -4.0131 7.1925 18 8 -3.2829 -4.6379 6.4130 19 14 -2.8220 -3.8864 8.9645 20 1 -1.7601 -3.2372 9.7746 21 1 -4.0632 -3.0743 9.0341 22 1 -3.0892 -5.2466 9.4975 23 6 -0.5099 -5.4452 8.2641 24 6 0.6454 -6.2024 8.2101 25 6 1.3155 -6.3614 7.0110 26 9 2.4414 -7.1059 6.9573 27 6 0.8774 -3.5824 3.5925 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 3.1301 1.4424 0.0005 32 1 1.6768 1.9562 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7490 -1.2492 35 1 1.6766 -0.2075 -2.1391 36 1 3.1299 -0.7218 -1.2490 37 1 1.8929 -0.5141 3.9323 38 1 1.8934 1.0277 3.0423 39 1 0.4400 0.0001 3.0423 40 1 4.3770 -1.3931 0.6309 41 1 4.3776 0.1486 1.5206 42 1 4.3772 -1.3925 2.4111 43 1 2.8842 -2.7452 3.1672 44 1 1.5878 -5.0311 1.5140 45 1 3.2168 -5.0224 2.3219 46 1 -0.7269 -4.5062 5.0302 47 1 -2.0650 -3.0148 6.8013 48 1 -3.5094 -5.5314 6.7050 49 1 -1.0320 -5.3278 9.2023 50 1 1.0227 -6.6748 9.1052 51 1 0.8724 -3.0390 4.5374 52 1 -0.0987 -3.6042 3.1078 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18362370_12335834.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:32:25 Heat of formation + Delta-G solvation = -136.447396 kcal Electronic energy + Delta-G solvation = -32373.127304 eV Core-core repulsion = 27991.137562 eV Total energy + Delta-G solvation = -4381.989742 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 369.173 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -50.10678 -41.76775 -40.41187 -39.20949 -37.43585 -36.78808 -36.48028 -33.07669 -32.34114 -29.91110 -29.25186 -29.02039 -27.80272 -27.47137 -27.21731 -26.59511 -25.34097 -23.30391 -22.38124 -20.47819 -20.32629 -18.91461 -18.64923 -18.44327 -18.33101 -17.45037 -17.28131 -16.84019 -16.22400 -16.14261 -15.95506 -15.84016 -15.62809 -15.23505 -15.05008 -14.88743 -14.75500 -14.68833 -14.45555 -14.32556 -14.05356 -13.87350 -13.70984 -13.55364 -13.35208 -13.28728 -13.17129 -13.14333 -12.90579 -12.88119 -12.81537 -12.77766 -12.34059 -12.22500 -12.07775 -11.77753 -11.67182 -11.63896 -11.53750 -11.34623 -11.20169 -10.43277 -10.38279 -10.29522 -10.03060 -9.96629 -9.81035 -0.49740 -0.06527 1.19597 1.23442 1.46189 1.51997 1.58058 1.76735 1.80499 1.99333 2.13844 2.34393 2.49394 2.98341 3.06797 3.27961 3.42382 3.52637 3.67675 3.80159 3.90526 3.99421 4.08741 4.16896 4.17447 4.30077 4.38937 4.47885 4.50730 4.57507 4.58260 4.61439 4.70162 4.77011 4.77600 4.81193 4.85744 4.86325 4.87629 4.88381 4.90741 4.91292 5.05537 5.10023 5.14382 5.15322 5.25915 5.39500 5.46779 5.47798 5.53584 5.55928 5.63815 5.72583 6.38951 6.72229 6.82090 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.384 4.384 3 C -0.142 4.142 4 C -0.139 4.139 5 Si 1.319 2.681 6 C -0.514 4.514 7 C -0.525 4.525 8 O -0.613 6.613 9 C 0.086 3.914 10 C 0.096 3.904 11 N -0.638 5.638 12 C 0.579 3.421 13 O -0.576 6.576 14 C -0.179 4.179 15 C -0.026 4.026 16 C -0.129 4.129 17 C -0.075 4.075 18 O -0.550 6.550 19 Si 0.972 3.028 20 H -0.249 1.249 21 H -0.276 1.276 22 H -0.249 1.249 23 C -0.066 4.066 24 C -0.148 4.148 25 C 0.129 3.871 26 F -0.140 7.140 27 C 0.076 3.924 28 H 0.065 0.935 29 H 0.044 0.956 30 H 0.060 0.940 31 H 0.060 0.940 32 H 0.047 0.953 33 H 0.066 0.934 34 H 0.058 0.942 35 H 0.045 0.955 36 H 0.057 0.943 37 H 0.075 0.925 38 H 0.076 0.924 39 H 0.079 0.921 40 H 0.067 0.933 41 H 0.076 0.924 42 H 0.069 0.931 43 H 0.116 0.884 44 H 0.104 0.896 45 H 0.085 0.915 46 H 0.159 0.841 47 H 0.140 0.860 48 H 0.390 0.610 49 H 0.157 0.843 50 H 0.166 0.834 51 H 0.115 0.885 52 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.492 6.593 3.166 8.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.426 4.426 3 C -0.199 4.199 4 C -0.196 4.196 5 Si 1.449 2.551 6 C -0.617 4.617 7 C -0.625 4.625 8 O -0.570 6.570 9 C 0.028 3.972 10 C -0.026 4.026 11 N -0.374 5.374 12 C 0.370 3.630 13 O -0.456 6.456 14 C -0.182 4.182 15 C -0.045 4.045 16 C -0.130 4.130 17 C -0.185 4.185 18 O -0.357 6.357 19 Si 0.796 3.204 20 H -0.173 1.173 21 H -0.201 1.201 22 H -0.173 1.173 23 C -0.084 4.084 24 C -0.166 4.166 25 C 0.109 3.891 26 F -0.119 7.119 27 C -0.046 4.046 28 H 0.084 0.916 29 H 0.063 0.937 30 H 0.079 0.921 31 H 0.079 0.921 32 H 0.066 0.934 33 H 0.085 0.915 34 H 0.077 0.923 35 H 0.064 0.936 36 H 0.076 0.924 37 H 0.094 0.906 38 H 0.095 0.905 39 H 0.098 0.902 40 H 0.086 0.914 41 H 0.095 0.905 42 H 0.088 0.912 43 H 0.134 0.866 44 H 0.122 0.878 45 H 0.104 0.896 46 H 0.177 0.823 47 H 0.157 0.843 48 H 0.239 0.761 49 H 0.174 0.826 50 H 0.183 0.817 51 H 0.133 0.867 52 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -3.524 6.311 3.522 8.041 hybrid contribution 0.923 -0.607 -0.475 1.203 sum -2.601 5.704 3.047 6.970 Atomic orbital electron populations 1.21553 0.93956 1.02018 1.01933 1.25963 1.00636 1.02857 1.13122 1.21612 1.01136 0.94900 1.02266 1.21562 1.00889 1.00177 0.96990 0.76193 0.61914 0.52514 0.64441 1.27059 1.07508 1.09715 1.17388 1.27215 1.25935 1.04946 1.04452 1.85444 1.78691 1.46679 1.46234 1.23543 0.97027 0.90773 0.85840 1.23687 0.99735 0.93821 0.85363 1.49541 1.49450 1.18321 1.20078 1.17931 0.79865 0.81575 0.83636 1.90835 1.46827 1.28593 1.79344 1.19945 1.00494 1.05589 0.92211 1.21297 0.90516 0.93278 0.99364 1.20523 0.98886 1.00602 0.92991 1.25045 0.85162 0.99012 1.09296 1.86516 1.55324 1.35265 1.58577 0.85354 0.79972 0.81103 0.73954 1.17308 1.20124 1.17310 1.21408 0.94317 0.93511 0.99172 1.21329 0.96669 1.01908 0.96712 1.18107 0.84182 0.92167 0.94678 1.91540 1.49173 1.74017 1.97153 1.24280 0.99152 0.79698 1.01436 0.91627 0.93733 0.92148 0.92094 0.93373 0.91506 0.92286 0.93594 0.92370 0.90582 0.90474 0.90194 0.91358 0.90458 0.91160 0.86628 0.87763 0.89622 0.82315 0.84257 0.76056 0.82553 0.81652 0.86713 0.86169 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.39 7.85 71.98 0.56 0.96 16 2 C -0.38 1.28 0.53 -10.80 -0.01 1.28 16 3 C -0.14 0.49 7.85 71.98 0.56 1.05 16 4 C -0.14 0.20 7.85 71.98 0.56 0.76 16 5 Si 1.32 -8.43 8.25 68.60 0.57 -7.87 16 6 C -0.51 3.80 8.65 113.37 0.98 4.78 16 7 C -0.52 2.21 8.63 113.37 0.98 3.19 16 8 O -0.61 2.89 8.58 -148.98 -1.28 1.61 16 9 C 0.09 -0.44 3.74 31.25 0.12 -0.33 16 10 C 0.10 -0.01 8.67 86.48 0.75 0.74 16 11 N -0.64 -1.44 3.60 -844.89 -3.04 -4.48 16 12 C 0.58 5.59 7.65 86.74 0.66 6.26 16 13 O -0.58 -11.22 16.72 -3.95 -0.07 -11.29 16 14 C -0.18 -0.84 5.78 -20.05 -0.12 -0.95 16 15 C -0.03 0.06 8.29 22.52 0.19 0.25 16 16 C -0.13 0.67 5.35 -19.90 -0.11 0.56 16 17 C -0.07 0.59 2.80 71.24 0.20 0.79 16 18 O -0.55 3.05 12.83 -148.98 -1.91 1.14 16 19 Si 0.97 -6.91 25.13 68.60 1.72 -5.18 16 20 H -0.25 1.64 7.11 99.48 0.71 2.35 16 21 H -0.28 0.68 7.11 99.48 0.71 1.38 16 22 H -0.25 1.75 7.04 99.48 0.70 2.45 16 23 C -0.07 0.33 8.66 22.31 0.19 0.53 16 24 C -0.15 0.18 10.01 22.28 0.22 0.41 16 25 C 0.13 0.76 7.24 22.67 0.16 0.92 16 26 F -0.14 -1.74 16.05 44.97 0.72 -1.02 16 27 C 0.08 -0.46 6.25 86.48 0.54 0.08 16 28 H 0.06 -0.33 7.79 -2.39 -0.02 -0.35 16 29 H 0.04 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.06 -0.17 7.96 -2.39 -0.02 -0.19 16 31 H 0.06 -0.27 7.79 -2.39 -0.02 -0.29 16 32 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.07 -0.36 7.79 -2.39 -0.02 -0.38 16 34 H 0.06 -0.07 7.97 -2.38 -0.02 -0.09 16 35 H 0.04 0.00 8.14 -2.39 -0.02 -0.02 16 36 H 0.06 -0.13 7.79 -2.39 -0.02 -0.15 16 37 H 0.08 -0.67 7.96 -2.39 -0.02 -0.69 16 38 H 0.08 -0.54 7.79 -2.38 -0.02 -0.56 16 39 H 0.08 -0.63 7.79 -2.39 -0.02 -0.65 16 40 H 0.07 -0.19 7.79 -2.39 -0.02 -0.21 16 41 H 0.08 -0.34 7.79 -2.39 -0.02 -0.36 16 42 H 0.07 -0.34 7.28 -2.39 -0.02 -0.36 16 43 H 0.12 -0.97 6.45 -2.39 -0.02 -0.98 16 44 H 0.10 -0.07 8.14 -2.39 -0.02 -0.09 16 45 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 46 H 0.16 -0.93 6.05 -2.91 -0.02 -0.95 16 47 H 0.14 -1.56 7.96 -2.39 -0.02 -1.58 16 48 H 0.39 -4.30 8.70 -74.06 -0.64 -4.95 16 49 H 0.16 -1.47 4.84 -2.91 -0.01 -1.48 16 50 H 0.17 -0.88 8.06 -2.91 -0.02 -0.90 16 51 H 0.11 -1.20 7.64 -2.39 -0.02 -1.22 16 52 H 0.12 -1.03 8.03 -2.39 -0.02 -1.05 16 Total: 0.00 -21.44 420.15 4.20 -17.24 By element: Atomic # 1 Polarization: -12.44 SS G_CDS: 1.02 Total: -11.42 kcal Atomic # 6 Polarization: 14.80 SS G_CDS: 6.46 Total: 21.26 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -3.04 Total: -4.48 kcal Atomic # 8 Polarization: -5.28 SS G_CDS: -3.26 Total: -8.54 kcal Atomic # 9 Polarization: -1.74 SS G_CDS: 0.72 Total: -1.02 kcal Atomic # 14 Polarization: -15.34 SS G_CDS: 2.29 Total: -13.05 kcal Total: -21.44 4.20 -17.24 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_12335834.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.208 kcal (2) G-P(sol) polarization free energy of solvation -21.440 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds