Wall clock time and date at job start Sun Mar 7 2021 10:57:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47350 * 2 1 4 4 C 1.52997 * 109.46963 * 240.00327 * 2 1 3 5 5 Si 1.86299 * 109.47306 * 120.00192 * 2 1 3 6 6 C 1.86299 * 109.47114 * 299.99845 * 5 2 1 7 7 C 1.86301 * 109.47129 * 180.02562 * 5 2 1 8 8 O 1.63097 * 109.47001 * 59.99834 * 5 2 1 9 9 C 1.42902 * 114.00284 * 180.02562 * 8 5 2 10 10 C 1.53496 * 114.20797 * 210.00520 * 9 8 5 11 11 N 1.47065 * 87.98304 * 220.34215 * 10 9 8 12 12 C 1.34777 * 136.06049 * 207.08175 * 11 10 9 13 13 O 1.21553 * 119.99559 * 5.59937 * 12 11 10 14 14 C 1.47846 * 120.00453 * 185.59592 * 12 11 10 15 15 C 1.39560 * 120.14033 * 186.71617 * 14 12 11 16 16 C 1.37987 * 119.87204 * 179.97438 * 15 14 12 17 17 C 1.50692 * 119.92294 * 179.97438 * 16 15 14 18 18 O 1.42902 * 109.47479 * 65.01834 * 17 16 15 19 19 Si 1.86300 * 109.47265 * 185.02207 * 17 16 15 20 20 H 1.48503 * 109.47195 * 59.99697 * 19 17 16 21 21 H 1.48504 * 109.47210 * 179.97438 * 19 17 16 22 22 H 1.48497 * 109.46912 * 299.99553 * 19 17 16 23 23 C 1.38325 * 120.15664 * 359.97438 * 16 15 14 24 24 C 1.38466 * 120.28090 * 0.02562 * 23 16 15 25 25 Br 1.89096 * 119.93615 * 179.97438 * 24 23 16 26 26 C 1.38029 * 120.12541 * 359.97438 * 24 23 16 27 27 C 1.47066 * 87.88459 * 27.33733 * 11 10 9 28 28 H 1.09001 * 109.46998 * 300.00126 * 1 2 3 29 29 H 1.09003 * 109.47027 * 59.99062 * 1 2 3 30 30 H 1.09000 * 109.47342 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.47352 * 179.97438 * 3 2 1 32 32 H 1.08995 * 109.46997 * 300.00469 * 3 2 1 33 33 H 1.09007 * 109.46777 * 60.00117 * 3 2 1 34 34 H 1.08995 * 109.47205 * 300.00092 * 4 2 1 35 35 H 1.09003 * 109.47347 * 59.99971 * 4 2 1 36 36 H 1.09001 * 109.47194 * 179.97438 * 4 2 1 37 37 H 1.09003 * 109.47242 * 179.97438 * 6 5 2 38 38 H 1.08995 * 109.47366 * 299.99754 * 6 5 2 39 39 H 1.09001 * 109.47139 * 60.00318 * 6 5 2 40 40 H 1.09001 * 109.47067 * 299.99615 * 7 5 2 41 41 H 1.09000 * 109.47450 * 59.99783 * 7 5 2 42 42 H 1.09003 * 109.46849 * 180.02562 * 7 5 2 43 43 H 1.09000 * 113.40536 * 343.20027 * 9 8 5 44 44 H 1.09002 * 113.46937 * 105.56132 * 10 9 8 45 45 H 1.08997 * 113.46738 * 335.11620 * 10 9 8 46 46 H 1.07991 * 120.06256 * 0.02562 * 15 14 12 47 47 H 1.09006 * 109.47278 * 305.02030 * 17 16 15 48 48 H 0.96695 * 113.99702 * 60.00483 * 18 17 16 49 49 H 1.08001 * 119.85931 * 179.71966 * 23 16 15 50 50 H 1.08007 * 120.07698 * 179.97438 * 26 24 23 51 51 H 1.09002 * 113.46717 * 87.44301 * 27 11 10 52 52 H 1.08999 * 113.47111 * 217.87522 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 14 2.1510 -0.8783 1.5211 6 6 1.5301 -0.0001 3.0422 7 6 4.0141 -0.8776 1.5214 8 8 1.6074 -2.4159 1.5210 9 6 2.0285 -3.1815 2.6518 10 6 2.1843 -4.6828 2.3729 11 7 1.5810 -4.9372 3.6897 12 6 1.6419 -5.9181 4.6120 13 8 2.4168 -6.8430 4.4651 14 6 0.7663 -5.8692 5.8022 15 6 0.9229 -6.8043 6.8263 16 6 0.1030 -6.7532 7.9350 17 6 0.2707 -7.7627 9.0411 18 8 1.5470 -7.5849 9.6589 19 14 -1.0722 -7.5227 10.3099 20 1 -2.3985 -7.7075 9.6680 21 1 -0.9072 -8.5179 11.3997 22 1 -0.9816 -6.1516 10.8732 23 6 -0.8726 -5.7776 8.0334 24 6 -1.0337 -4.8466 7.0211 25 35 -2.3709 -3.5175 7.1654 26 6 -0.2199 -4.8869 5.9070 27 6 0.8769 -3.6531 3.5545 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5140 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9564 -0.8899 33 1 1.6767 1.9563 0.8901 34 1 1.6766 -1.7488 -1.2493 35 1 1.6766 -0.2073 -2.1393 36 1 3.1300 -0.7208 -1.2495 37 1 1.8931 -0.5142 3.9322 38 1 1.8935 1.0275 3.0423 39 1 0.4401 -0.0001 3.0423 40 1 4.3777 -1.3911 0.6314 41 1 4.3771 0.1502 1.5216 42 1 4.3774 -1.3918 2.4112 43 1 2.8674 -2.7370 3.1874 44 1 3.2230 -5.0056 2.3016 45 1 1.5747 -5.0352 1.5408 46 1 1.6849 -7.5659 6.7516 47 1 0.2043 -8.7692 8.6278 48 1 1.6764 -6.7098 10.0493 49 1 -1.5147 -5.7448 8.9012 50 1 -0.3464 -4.1606 5.1177 51 1 -0.0774 -3.7341 3.0340 52 1 0.8015 -3.0987 4.4900 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18362370_12335870.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:57:55 Heat of formation + Delta-G solvation = -84.808729 kcal Electronic energy + Delta-G solvation = -31533.801724 eV Core-core repulsion = 27283.687175 eV Total energy + Delta-G solvation = -4250.114549 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 429.093 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.01696 -40.73025 -39.13861 -37.74031 -36.93555 -36.67889 -33.67625 -33.37382 -30.54399 -30.16187 -29.47854 -29.20702 -27.95372 -27.74148 -27.44596 -26.77527 -25.15398 -22.95649 -22.63830 -20.54307 -20.48263 -18.94604 -18.62247 -18.18197 -17.80308 -17.27679 -16.60569 -16.47970 -16.34470 -16.11042 -15.75805 -15.35890 -15.23355 -15.07645 -14.95247 -14.90065 -14.79324 -14.48338 -14.19229 -14.11916 -14.06660 -13.72656 -13.54631 -13.39324 -13.37927 -13.17702 -13.08390 -13.01887 -13.01100 -12.94350 -12.48580 -12.35715 -12.24532 -12.01049 -11.89954 -11.82164 -11.80043 -11.64042 -11.52019 -11.42706 -11.13307 -10.60922 -10.47820 -10.33123 -10.18769 -10.01150 -9.88659 -0.55116 -0.21214 0.35586 0.97420 1.07315 1.30314 1.38576 1.49718 1.59293 1.70518 1.80652 1.89191 2.28092 2.45494 2.97672 3.05701 3.19509 3.38659 3.54347 3.62685 3.77130 3.88725 3.92047 4.01128 4.03067 4.03951 4.11689 4.17040 4.28781 4.36250 4.41336 4.46179 4.51870 4.56165 4.57048 4.62073 4.62410 4.65650 4.69715 4.73319 4.77357 4.90715 4.91657 5.02186 5.02779 5.04722 5.10203 5.24833 5.28591 5.32996 5.35589 5.40272 5.44060 5.50005 6.40501 6.43976 6.94568 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.135 4.135 5 Si 1.285 2.715 6 C -0.511 4.511 7 C -0.512 4.512 8 O -0.604 6.604 9 C 0.079 3.921 10 C 0.104 3.896 11 N -0.642 5.642 12 C 0.596 3.404 13 O -0.521 6.521 14 C -0.123 4.123 15 C -0.014 4.014 16 C -0.120 4.120 17 C -0.079 4.079 18 O -0.533 6.533 19 Si 0.939 3.061 20 H -0.245 1.245 21 H -0.246 1.246 22 H -0.247 1.247 23 C -0.072 4.072 24 C -0.095 4.095 25 Br -0.034 7.034 26 C -0.064 4.064 27 C 0.069 3.931 28 H 0.054 0.946 29 H 0.054 0.946 30 H 0.060 0.940 31 H 0.056 0.944 32 H 0.057 0.943 33 H 0.056 0.944 34 H 0.060 0.940 35 H 0.054 0.946 36 H 0.054 0.946 37 H 0.066 0.934 38 H 0.075 0.925 39 H 0.074 0.926 40 H 0.074 0.926 41 H 0.076 0.924 42 H 0.066 0.934 43 H 0.106 0.894 44 H 0.089 0.911 45 H 0.103 0.897 46 H 0.151 0.849 47 H 0.125 0.875 48 H 0.378 0.622 49 H 0.136 0.864 50 H 0.150 0.850 51 H 0.107 0.893 52 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.435 3.939 0.174 4.196 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.418 4.418 3 C -0.195 4.195 4 C -0.192 4.192 5 Si 1.417 2.583 6 C -0.613 4.613 7 C -0.614 4.614 8 O -0.561 6.561 9 C 0.021 3.979 10 C -0.018 4.018 11 N -0.379 5.379 12 C 0.387 3.613 13 O -0.397 6.397 14 C -0.127 4.127 15 C -0.033 4.033 16 C -0.121 4.121 17 C -0.190 4.190 18 O -0.338 6.338 19 Si 0.761 3.239 20 H -0.169 1.169 21 H -0.170 1.170 22 H -0.171 1.171 23 C -0.092 4.092 24 C -0.175 4.175 25 Br 0.052 6.948 26 C -0.084 4.084 27 C -0.054 4.054 28 H 0.073 0.927 29 H 0.073 0.927 30 H 0.079 0.921 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.075 0.925 34 H 0.079 0.921 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.086 0.914 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.093 0.907 41 H 0.095 0.905 42 H 0.085 0.915 43 H 0.123 0.877 44 H 0.107 0.893 45 H 0.121 0.879 46 H 0.168 0.832 47 H 0.143 0.857 48 H 0.225 0.775 49 H 0.154 0.846 50 H 0.167 0.833 51 H 0.125 0.875 52 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -2.237 3.070 0.568 3.841 hybrid contribution 0.595 0.832 -0.195 1.041 sum -1.642 3.902 0.373 4.250 Atomic orbital electron populations 1.21521 0.93728 1.02024 1.01902 1.25783 1.00738 1.02673 1.12595 1.21562 1.00814 0.94852 1.02232 1.21522 1.00663 1.00250 0.96779 0.76800 0.63147 0.53101 0.65258 1.27059 1.07162 1.09664 1.17398 1.27056 1.24769 1.04934 1.04634 1.85434 1.78528 1.46327 1.45792 1.23334 0.96287 0.92012 0.86288 1.23313 1.00884 0.92268 0.85313 1.48991 1.48146 1.21079 1.19717 1.17514 0.82369 0.80056 0.81408 1.90847 1.38605 1.33237 1.77012 1.19850 0.98409 0.98347 0.96131 1.21303 0.96327 0.95944 0.89735 1.20341 0.96622 0.97592 0.97561 1.25012 0.95269 1.00909 0.97814 1.86566 1.33132 1.38422 1.75669 0.85820 0.77383 0.81725 0.79003 1.16869 1.16956 1.17071 1.21286 0.97061 0.92966 0.97853 1.21655 0.99061 0.98470 0.98271 1.96835 1.49580 1.50016 1.98381 1.21816 0.92730 0.97154 0.96746 1.23925 0.98519 0.82768 1.00187 0.92652 0.92734 0.92126 0.92487 0.92421 0.92482 0.92102 0.92732 0.92653 0.91445 0.90541 0.90666 0.90663 0.90535 0.91463 0.87709 0.89257 0.87898 0.83163 0.85676 0.77505 0.84609 0.83314 0.87536 0.89185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.19 7.85 37.16 0.29 0.48 16 2 C -0.37 0.64 0.53 -90.62 -0.05 0.59 16 3 C -0.14 0.24 7.85 37.16 0.29 0.53 16 4 C -0.13 0.16 7.85 37.16 0.29 0.45 16 5 Si 1.28 -3.66 8.24 -169.99 -1.40 -5.06 16 6 C -0.51 1.33 8.65 101.05 0.87 2.20 16 7 C -0.51 1.05 8.64 101.05 0.87 1.93 16 8 O -0.60 1.33 8.61 -35.23 -0.30 1.02 16 9 C 0.08 -0.20 3.92 -26.09 -0.10 -0.30 16 10 C 0.10 -0.11 8.45 -8.51 -0.07 -0.19 16 11 N -0.64 -0.13 3.67 -186.23 -0.68 -0.81 16 12 C 0.60 1.66 8.01 -12.33 -0.10 1.56 16 13 O -0.52 -3.32 17.15 5.32 0.09 -3.23 16 14 C -0.12 -0.15 5.87 -104.97 -0.62 -0.76 16 15 C -0.01 -0.01 9.23 -39.18 -0.36 -0.37 16 16 C -0.12 0.04 5.34 -104.69 -0.56 -0.52 16 17 C -0.08 0.10 2.80 36.00 0.10 0.20 16 18 O -0.53 0.25 12.83 -35.23 -0.45 -0.20 16 19 Si 0.94 -1.32 25.13 -169.99 -4.27 -5.59 16 20 H -0.25 0.21 7.11 56.52 0.40 0.61 16 21 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 22 H -0.25 0.36 7.04 56.52 0.40 0.76 16 23 C -0.07 0.03 8.41 -39.47 -0.33 -0.31 16 24 C -0.10 0.01 6.22 -39.57 -0.25 -0.24 16 25 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 26 C -0.06 0.02 8.88 -39.16 -0.35 -0.33 16 27 C 0.07 -0.18 5.98 -8.38 -0.05 -0.23 16 28 H 0.05 -0.11 7.79 -51.93 -0.40 -0.52 16 29 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.06 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.06 -0.13 7.79 -51.93 -0.40 -0.53 16 32 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.06 -0.13 7.79 -51.92 -0.40 -0.54 16 34 H 0.06 -0.07 7.96 -51.93 -0.41 -0.48 16 35 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.05 -0.09 7.79 -51.93 -0.40 -0.49 16 37 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 38 H 0.08 -0.19 7.79 -51.93 -0.40 -0.60 16 39 H 0.07 -0.19 7.79 -51.93 -0.40 -0.60 16 40 H 0.07 -0.13 7.79 -51.93 -0.40 -0.53 16 41 H 0.08 -0.16 7.79 -51.93 -0.40 -0.57 16 42 H 0.07 -0.15 7.31 -51.93 -0.38 -0.53 16 43 H 0.11 -0.41 6.50 -51.93 -0.34 -0.74 16 44 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 46 H 0.15 0.23 7.66 -52.49 -0.40 -0.18 16 47 H 0.13 -0.26 7.96 -51.93 -0.41 -0.67 16 48 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 49 H 0.14 -0.18 4.84 -52.49 -0.25 -0.44 16 50 H 0.15 -0.30 4.19 -52.48 -0.22 -0.52 16 51 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 52 H 0.09 -0.35 6.74 -51.93 -0.35 -0.70 16 LS Contribution 434.01 15.07 6.54 6.54 Total: 0.00 -6.60 434.01 -10.66 -17.26 By element: Atomic # 1 Polarization: -4.57 SS G_CDS: -7.77 Total: -12.35 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: -0.11 Total: 4.70 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.68 Total: -0.81 kcal Atomic # 8 Polarization: -1.75 SS G_CDS: -0.66 Total: -2.41 kcal Atomic # 14 Polarization: -4.97 SS G_CDS: -5.67 Total: -10.64 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -6.60 -10.66 -17.26 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_12335870.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.548 kcal (2) G-P(sol) polarization free energy of solvation -6.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.153 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.656 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.261 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds