Wall clock time and date at job start Sun Mar 7 2021 11:23:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37872 * 126.45690 * 2 1 4 4 C 1.46679 * 126.22973 * 359.97438 * 3 2 1 5 5 O 1.21693 * 120.00225 * 359.97438 * 4 3 2 6 6 N 1.34780 * 119.99491 * 179.97438 * 4 3 2 7 7 C 1.47057 * 136.05968 * 359.63569 * 6 4 3 8 8 C 1.53756 * 87.89130 * 152.96133 * 7 6 4 9 9 O 1.42898 * 114.09115 * 139.78056 * 8 7 6 10 10 Si 1.63098 * 114.00255 * 116.55737 * 9 8 7 11 11 C 1.86295 * 109.47390 * 300.00081 * 10 9 8 12 12 C 1.86310 * 109.46876 * 59.99978 * 10 9 8 13 13 C 1.86294 * 109.47296 * 179.97438 * 10 9 8 14 14 C 1.52997 * 109.47032 * 59.99865 * 13 10 9 15 15 C 1.52999 * 109.47430 * 180.02562 * 13 10 9 16 16 C 1.53011 * 109.47194 * 300.00235 * 13 10 9 17 17 C 1.47070 * 136.05239 * 179.97438 * 6 4 3 18 18 N 1.37650 * 107.53522 * 179.97438 * 3 2 1 19 19 C 1.35539 * 108.64163 * 359.76036 * 18 3 2 20 20 C 1.50698 * 125.56491 * 180.28416 * 19 18 3 21 21 O 1.42899 * 109.47105 * 300.15775 * 20 19 18 22 22 Si 1.86296 * 109.47303 * 180.15205 * 20 19 18 23 23 H 1.48502 * 109.46998 * 60.00232 * 22 20 19 24 24 H 1.48497 * 109.47383 * 179.97438 * 22 20 19 25 25 H 1.48494 * 109.47268 * 300.00298 * 22 20 19 26 26 C 1.35452 * 108.87236 * 0.39692 * 19 18 3 27 27 H 1.08993 * 109.47500 * 269.97724 * 1 2 3 28 28 H 1.09004 * 109.47275 * 29.97871 * 1 2 3 29 29 H 1.09008 * 109.47165 * 149.97781 * 1 2 3 30 30 H 1.09009 * 113.46726 * 267.69002 * 7 6 4 31 31 H 1.08998 * 113.47169 * 38.12928 * 7 6 4 32 32 H 1.09008 * 114.39022 * 272.67386 * 8 7 6 33 33 H 1.09005 * 109.47240 * 59.99388 * 11 10 9 34 34 H 1.08994 * 109.47520 * 179.97438 * 11 10 9 35 35 H 1.09001 * 109.47413 * 300.00207 * 11 10 9 36 36 H 1.08999 * 109.46680 * 60.00410 * 12 10 9 37 37 H 1.09004 * 109.46609 * 179.97438 * 12 10 9 38 38 H 1.08997 * 109.47056 * 300.00045 * 12 10 9 39 39 H 1.08997 * 109.47084 * 60.00480 * 14 13 10 40 40 H 1.09005 * 109.47616 * 179.97438 * 14 13 10 41 41 H 1.08994 * 109.47315 * 299.99965 * 14 13 10 42 42 H 1.08999 * 109.46955 * 59.99970 * 15 13 10 43 43 H 1.08997 * 109.47449 * 179.97438 * 15 13 10 44 44 H 1.08997 * 109.47032 * 299.99732 * 15 13 10 45 45 H 1.08999 * 109.46904 * 59.99727 * 16 13 10 46 46 H 1.08997 * 109.47207 * 180.02562 * 16 13 10 47 47 H 1.08993 * 109.46888 * 299.99718 * 16 13 10 48 48 H 1.08995 * 113.47176 * 321.86850 * 17 6 4 49 49 H 1.08999 * 113.46639 * 92.31064 * 17 6 4 50 50 H 0.96993 * 125.67650 * 179.97438 * 18 3 2 51 51 H 1.09002 * 109.46699 * 60.15290 * 20 19 18 52 52 H 0.96702 * 113.99586 * 299.99969 * 21 20 19 53 53 H 1.08002 * 126.07027 * 179.87463 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8897 2.5092 -0.0005 5 8 0.7025 2.7765 -0.0015 6 7 2.8036 3.4999 0.0001 7 6 4.2716 3.5863 0.0077 8 6 4.1386 4.9461 -0.6976 9 8 5.0534 5.9385 -0.2284 10 14 6.1133 6.4505 -1.3573 11 6 7.1277 5.0075 -1.9566 12 6 5.1834 7.1938 -2.7904 13 6 7.2390 7.7358 -0.6147 14 6 8.0026 7.1261 0.5625 15 6 8.2329 8.2166 -1.6739 16 6 6.4055 8.9210 -0.1229 17 6 2.7714 4.9702 -0.0006 18 7 3.6284 0.6625 0.0006 19 6 3.6218 -0.6928 0.0063 20 6 4.8433 -1.5753 0.0149 21 8 5.6304 -1.3105 -1.1480 22 14 4.3182 -3.3627 0.0158 23 1 3.5138 -3.6428 -1.2007 24 1 5.5219 -4.2323 0.0236 25 1 3.5003 -3.6378 1.2242 26 6 2.3379 -1.1247 0.0005 27 1 -0.3634 -0.0004 1.0276 28 1 -0.3634 0.8902 -0.5135 29 1 -0.3634 -0.8898 -0.5142 30 1 4.6972 3.6565 1.0088 31 1 4.7546 2.8240 -0.6036 32 1 4.0848 4.8860 -1.7847 33 1 6.4688 4.2557 -2.3912 34 1 7.8357 5.3495 -2.7114 35 1 7.6718 4.5726 -1.1182 36 1 4.5900 8.0381 -2.4397 37 1 5.8918 7.5364 -3.5447 38 1 4.5245 6.4421 -3.2250 39 1 8.5965 6.2818 0.2122 40 1 8.6616 7.8779 0.9968 41 1 7.2943 6.7839 1.3170 42 1 7.6885 8.6512 -2.5122 43 1 8.8912 8.9690 -1.2395 44 1 8.8268 7.3726 -2.0245 45 1 5.6971 8.5787 0.6316 46 1 7.0641 9.6732 0.3112 47 1 5.8615 9.3554 -0.9615 48 1 1.9763 5.3868 -0.6190 49 1 2.8011 5.4055 0.9983 50 1 4.4190 1.2244 0.0004 51 1 5.4338 -1.3696 0.9078 52 1 5.1674 -1.4722 -1.9814 53 1 2.0136 -2.1549 0.0011 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18362370_13940406.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:23:32 Heat of formation + Delta-G solvation = -82.644839 kcal Electronic energy + Delta-G solvation = -30545.538574 eV Core-core repulsion = 26542.598471 eV Total energy + Delta-G solvation = -4002.940102 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 354.193 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.67046 -41.33390 -39.11102 -37.81779 -36.95198 -36.68830 -33.58944 -32.01723 -30.16097 -29.50632 -29.22798 -28.14294 -27.96637 -27.55512 -27.32323 -26.48290 -23.40909 -21.66366 -21.51404 -20.51293 -20.10574 -19.15132 -18.57449 -18.18616 -17.30011 -16.79208 -16.43996 -16.22711 -16.15117 -15.70910 -15.44785 -15.33291 -14.98440 -14.91750 -14.86750 -14.60060 -14.26109 -14.23726 -14.09346 -13.90123 -13.74796 -13.57992 -13.55990 -13.47352 -13.40188 -13.23036 -13.06143 -13.03379 -13.01227 -12.90485 -12.50318 -12.30445 -12.17008 -11.93070 -11.88342 -11.82481 -11.66375 -11.49161 -11.03414 -10.76242 -10.52519 -10.20683 -9.97702 -9.81545 -9.14889 0.35281 0.96022 1.06479 1.41332 1.45628 1.56104 1.57223 1.69893 1.81478 1.86922 2.12684 2.24407 2.37570 2.97954 3.24458 3.30354 3.49989 3.55615 3.80954 3.91730 4.01401 4.01487 4.11905 4.19807 4.23506 4.32526 4.37018 4.41411 4.50525 4.53522 4.54233 4.59486 4.60153 4.63797 4.71730 4.73848 4.75793 4.87987 4.90065 5.00571 5.01256 5.02753 5.08366 5.22325 5.23094 5.26360 5.31139 5.38487 5.41256 5.41911 5.48030 5.67703 5.91335 6.27355 6.31793 6.49694 7.06218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.062 4.062 3 C -0.051 4.051 4 C 0.624 3.376 5 O -0.516 6.516 6 N -0.650 5.650 7 C 0.071 3.929 8 C 0.082 3.918 9 O -0.604 6.604 10 Si 1.286 2.714 11 C -0.511 4.511 12 C -0.512 4.512 13 C -0.374 4.374 14 C -0.135 4.135 15 C -0.137 4.137 16 C -0.135 4.135 17 C 0.106 3.894 18 N -0.523 5.523 19 C 0.025 3.975 20 C -0.069 4.069 21 O -0.542 6.542 22 Si 0.977 3.023 23 H -0.247 1.247 24 H -0.252 1.252 25 H -0.246 1.246 26 C -0.206 4.206 27 H 0.070 0.930 28 H 0.081 0.919 29 H 0.065 0.935 30 H 0.105 0.895 31 H 0.076 0.924 32 H 0.105 0.895 33 H 0.065 0.935 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.075 0.925 37 H 0.076 0.924 38 H 0.066 0.934 39 H 0.054 0.946 40 H 0.054 0.946 41 H 0.059 0.941 42 H 0.056 0.944 43 H 0.057 0.943 44 H 0.056 0.944 45 H 0.060 0.940 46 H 0.054 0.946 47 H 0.055 0.945 48 H 0.089 0.911 49 H 0.102 0.898 50 H 0.416 0.584 51 H 0.120 0.880 52 H 0.381 0.619 53 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.909 -0.458 -1.094 4.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.164 4.164 4 C 0.416 3.584 5 O -0.391 6.391 6 N -0.388 5.388 7 C -0.052 4.052 8 C 0.024 3.976 9 O -0.561 6.561 10 Si 1.418 2.582 11 C -0.613 4.613 12 C -0.614 4.614 13 C -0.418 4.418 14 C -0.192 4.192 15 C -0.195 4.195 16 C -0.192 4.192 17 C -0.016 4.016 18 N -0.122 5.122 19 C -0.094 4.094 20 C -0.178 4.178 21 O -0.347 6.347 22 Si 0.797 3.203 23 H -0.170 1.170 24 H -0.176 1.176 25 H -0.169 1.169 26 C -0.231 4.231 27 H 0.089 0.911 28 H 0.100 0.900 29 H 0.084 0.916 30 H 0.123 0.877 31 H 0.095 0.905 32 H 0.123 0.877 33 H 0.085 0.915 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.094 0.906 37 H 0.095 0.905 38 H 0.085 0.915 39 H 0.073 0.927 40 H 0.073 0.927 41 H 0.078 0.922 42 H 0.075 0.925 43 H 0.076 0.924 44 H 0.075 0.925 45 H 0.079 0.921 46 H 0.073 0.927 47 H 0.074 0.926 48 H 0.108 0.892 49 H 0.120 0.880 50 H 0.257 0.743 51 H 0.138 0.862 52 H 0.229 0.771 53 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.324 -1.009 -0.373 3.494 hybrid contribution 0.636 0.798 -0.724 1.251 sum 3.960 -0.211 -1.096 4.114 Atomic orbital electron populations 1.20405 0.88789 1.03262 1.02644 1.19918 0.96044 0.90182 1.00896 1.20066 0.83678 0.92841 1.19791 1.16422 0.84225 0.81736 0.75986 1.90863 1.15087 1.82585 1.50567 1.49114 1.07344 1.07612 1.74772 1.23794 0.81463 0.97393 1.02593 1.23295 0.90109 0.86790 0.97451 1.85438 1.53139 1.56391 1.61135 0.76791 0.59974 0.64428 0.57040 1.27063 1.11015 1.16181 1.07017 1.27054 1.09478 1.08102 1.16756 1.25781 1.05918 1.08461 1.01614 1.21520 0.99953 1.00480 0.97229 1.21560 0.98676 1.01315 0.97912 1.21524 0.99458 0.97157 1.01082 1.23260 0.96343 0.79550 1.02468 1.42147 1.07327 1.06537 1.56173 1.21096 0.96834 0.83523 1.07934 1.24916 0.91761 1.09099 0.92071 1.86505 1.41371 1.91230 1.15621 0.85262 0.80219 0.72335 0.82481 1.17015 1.17603 1.16945 1.20613 0.90978 0.99143 1.12358 0.91116 0.89999 0.91570 0.87710 0.90544 0.87738 0.91541 0.90483 0.90719 0.90632 0.90510 0.91485 0.92668 0.92701 0.92161 0.92472 0.92400 0.92479 0.92111 0.92703 0.92637 0.89247 0.88039 0.74333 0.86183 0.77135 0.83601 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.21 9.83 36.01 0.35 0.14 16 2 C -0.06 -0.17 6.21 -104.16 -0.65 -0.82 16 3 C -0.05 -0.14 7.02 -81.98 -0.58 -0.71 16 4 C 0.62 2.33 8.04 -12.85 -0.10 2.23 16 5 O -0.52 -3.53 15.58 5.20 0.08 -3.45 16 6 N -0.65 -0.51 3.69 -186.65 -0.69 -1.20 16 7 C 0.07 -0.16 7.18 -8.37 -0.06 -0.22 16 8 C 0.08 -0.18 3.92 -26.09 -0.10 -0.28 16 9 O -0.60 1.20 8.61 -35.23 -0.30 0.89 16 10 Si 1.29 -3.53 8.24 -169.99 -1.40 -4.93 16 11 C -0.51 1.26 8.65 101.05 0.87 2.13 16 12 C -0.51 1.00 8.64 101.05 0.87 1.87 16 13 C -0.37 0.61 0.53 -90.62 -0.05 0.56 16 14 C -0.13 0.18 7.85 37.16 0.29 0.47 16 15 C -0.14 0.23 7.85 37.16 0.29 0.52 16 16 C -0.14 0.15 7.85 37.16 0.29 0.44 16 17 C 0.11 -0.07 8.45 -8.51 -0.07 -0.14 16 18 N -0.52 -0.13 5.91 -5.69 -0.03 -0.17 16 19 C 0.02 0.00 6.47 -81.95 -0.53 -0.53 16 20 C -0.07 0.12 3.08 36.00 0.11 0.23 16 21 O -0.54 0.79 12.88 -35.23 -0.45 0.33 16 22 Si 0.98 -1.75 25.83 -169.99 -4.39 -6.14 16 23 H -0.25 0.34 7.11 56.52 0.40 0.74 16 24 H -0.25 0.13 7.11 56.52 0.40 0.54 16 25 H -0.25 0.24 7.11 56.52 0.40 0.64 16 26 C -0.21 -0.23 9.27 -39.98 -0.37 -0.60 16 27 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 28 H 0.08 0.31 6.48 -51.93 -0.34 -0.02 16 29 H 0.07 0.04 8.14 -51.92 -0.42 -0.38 16 30 H 0.10 -0.32 8.14 -51.92 -0.42 -0.74 16 31 H 0.08 -0.28 6.39 -51.93 -0.33 -0.62 16 32 H 0.11 -0.37 6.50 -51.92 -0.34 -0.71 16 33 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 34 H 0.08 -0.18 7.79 -51.93 -0.40 -0.59 16 35 H 0.07 -0.18 7.79 -51.93 -0.40 -0.58 16 36 H 0.07 -0.12 7.79 -51.93 -0.40 -0.53 16 37 H 0.08 -0.16 7.79 -51.93 -0.40 -0.56 16 38 H 0.07 -0.14 7.31 -51.93 -0.38 -0.52 16 39 H 0.05 -0.11 7.80 -51.93 -0.40 -0.51 16 40 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 41 H 0.06 -0.08 7.96 -51.93 -0.41 -0.49 16 42 H 0.06 -0.12 7.79 -51.93 -0.40 -0.53 16 43 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 44 H 0.06 -0.13 7.80 -51.93 -0.40 -0.53 16 45 H 0.06 -0.06 7.96 -51.93 -0.41 -0.48 16 46 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 47 H 0.05 -0.09 7.79 -51.93 -0.40 -0.49 16 48 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 49 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 50 H 0.42 -0.71 5.86 -40.82 -0.24 -0.95 16 51 H 0.12 -0.34 7.96 -51.93 -0.41 -0.75 16 52 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 53 H 0.15 -0.07 6.17 -52.49 -0.32 -0.39 16 LS Contribution 419.62 15.07 6.32 6.32 Total: 0.00 -7.13 419.62 -8.91 -16.04 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -8.62 Total: -12.98 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 0.58 Total: 5.28 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -0.72 Total: -1.36 kcal Atomic # 8 Polarization: -1.55 SS G_CDS: -0.68 Total: -2.23 kcal Atomic # 14 Polarization: -5.28 SS G_CDS: -5.79 Total: -11.07 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -7.13 -8.91 -16.04 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_13940406.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.604 kcal (2) G-P(sol) polarization free energy of solvation -7.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.040 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.645 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds