Wall clock time and date at job start Sun Mar 7 2021 11:39:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.37637 * 125.67025 * 2 1 4 4 C 1.46672 * 126.23271 * 359.96308 * 3 2 1 5 5 O 1.21697 * 119.99547 * 5.91664 * 4 3 2 6 6 N 1.34767 * 120.00322 * 185.91487 * 4 3 2 7 7 C 1.47581 * 134.49272 * 175.17923 * 6 4 3 8 8 C 1.53944 * 86.11939 * 204.64317 * 7 6 4 9 9 O 1.42900 * 113.74323 * 222.05041 * 8 7 6 10 10 Si 1.63101 * 113.99869 * 210.00087 * 9 8 7 11 11 C 1.86306 * 109.47307 * 299.99891 * 10 9 8 12 12 C 1.86295 * 109.47277 * 59.99685 * 10 9 8 13 13 C 1.86303 * 109.47194 * 180.02562 * 10 9 8 14 14 C 1.53002 * 109.47230 * 59.99720 * 13 10 9 15 15 C 1.52998 * 109.47161 * 179.97438 * 13 10 9 16 16 C 1.52999 * 109.46678 * 299.99740 * 13 10 9 17 17 C 1.47588 * 134.49266 * 355.18567 * 6 4 3 18 18 C 1.37889 * 107.54533 * 180.21901 * 3 2 1 19 19 C 1.39883 * 107.09182 * 359.62617 * 18 3 2 20 20 Br 1.89093 * 126.07251 * 180.10691 * 19 18 3 21 21 C 1.35499 * 107.85085 * 0.37679 * 19 18 3 22 22 C 1.50701 * 125.57127 * 179.78458 * 21 19 18 23 23 O 1.42902 * 109.47132 * 302.34052 * 22 21 19 24 24 Si 1.86300 * 109.47116 * 62.34383 * 22 21 19 25 25 H 1.48498 * 109.47288 * 63.85065 * 24 22 21 26 26 H 1.48500 * 109.46788 * 183.85398 * 24 22 21 27 27 H 1.48501 * 109.46653 * 303.84861 * 24 22 21 28 28 H 1.08996 * 109.47269 * 93.79948 * 1 2 3 29 29 H 1.09001 * 109.46845 * 213.80098 * 1 2 3 30 30 H 1.08994 * 109.47287 * 333.79939 * 1 2 3 31 31 H 1.09008 * 113.77010 * 90.34361 * 7 6 4 32 32 H 1.08999 * 113.77429 * 318.94374 * 7 6 4 33 33 H 1.09001 * 113.74075 * 90.73646 * 8 7 6 34 34 H 1.09002 * 109.47052 * 59.99464 * 11 10 9 35 35 H 1.08997 * 109.47541 * 180.02562 * 11 10 9 36 36 H 1.09007 * 109.46783 * 300.00235 * 11 10 9 37 37 H 1.09007 * 109.47085 * 60.00204 * 12 10 9 38 38 H 1.09002 * 109.47437 * 179.97438 * 12 10 9 39 39 H 1.08994 * 109.47267 * 299.99919 * 12 10 9 40 40 H 1.09001 * 109.46898 * 60.00382 * 14 13 10 41 41 H 1.08997 * 109.46652 * 180.02562 * 14 13 10 42 42 H 1.08997 * 109.47074 * 300.00067 * 14 13 10 43 43 H 1.09007 * 109.47376 * 59.99682 * 15 13 10 44 44 H 1.08999 * 109.47258 * 180.02562 * 15 13 10 45 45 H 1.09001 * 109.47329 * 299.99839 * 15 13 10 46 46 H 1.08997 * 109.47330 * 60.00114 * 16 13 10 47 47 H 1.09002 * 109.46909 * 180.02562 * 16 13 10 48 48 H 1.09001 * 109.47520 * 299.99673 * 16 13 10 49 49 H 1.08994 * 113.76745 * 41.05759 * 17 6 4 50 50 H 1.08996 * 113.76898 * 269.65485 * 17 6 4 51 51 H 1.08004 * 126.45484 * 179.75264 * 18 3 2 52 52 H 1.09003 * 109.47042 * 182.34331 * 22 21 19 53 53 H 0.96706 * 113.99734 * 59.99980 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8120 2.5123 -0.0008 5 8 0.6265 2.7650 0.1072 6 7 2.7062 3.5134 -0.1209 7 6 2.6056 4.9803 -0.2478 8 6 3.9824 4.9106 -0.9330 9 8 4.8815 5.9434 -0.5242 10 14 5.9512 6.3850 -1.6735 11 6 6.9871 4.9136 -2.1560 12 6 5.0332 7.0147 -3.1673 13 6 7.0558 7.7304 -1.0098 14 6 7.8097 7.2126 0.2168 15 6 8.0597 8.1442 -2.0877 16 6 6.2055 8.9389 -0.6132 17 6 4.1793 3.5831 -0.1787 18 6 3.5781 0.6892 -0.0050 19 6 3.5529 -0.7094 0.0007 20 35 5.0610 -1.8502 0.0003 21 6 2.2559 -1.1015 0.0004 22 6 1.7714 -2.5285 0.0009 23 8 2.3012 -3.2118 -1.1369 24 14 2.3432 -3.3779 1.5573 25 1 1.7183 -2.7252 2.7357 26 1 1.9462 -4.8082 1.5151 27 1 3.8212 -3.2773 1.6616 28 1 -0.3633 -0.0681 -1.0254 29 1 -0.3633 -0.8540 0.5717 30 1 -0.3633 0.9220 0.4537 31 1 2.6163 5.5057 0.7073 32 1 1.8030 5.3104 -0.9072 33 1 3.9285 4.7963 -2.0156 34 1 6.3411 4.1260 -2.5441 35 1 7.7023 5.2087 -2.9238 36 1 7.5242 4.5451 -1.2820 37 1 4.4271 7.8756 -2.8850 38 1 5.7481 7.3102 -3.9352 39 1 4.3873 6.2272 -3.5555 40 1 8.4155 6.3517 -0.0659 41 1 8.4556 8.0000 0.6053 42 1 7.0948 6.9176 0.9848 43 1 7.5229 8.5129 -2.9619 44 1 8.7062 8.9310 -1.6993 45 1 8.6654 7.2830 -2.3699 46 1 5.4906 8.6439 0.1548 47 1 6.8518 9.7263 -0.2253 48 1 5.6684 9.3079 -1.4870 49 1 4.6329 2.7976 -0.7829 50 1 4.6522 3.6980 0.7966 51 1 4.4582 1.3151 -0.0101 52 1 0.6823 -2.5425 -0.0415 53 1 3.2675 -3.2385 -1.1649 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18362370_5000100.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:39:12 Heat of formation + Delta-G solvation = -60.595601 kcal Electronic energy + Delta-G solvation = -32712.746956 eV Core-core repulsion = 28370.944978 eV Total energy + Delta-G solvation = -4341.801978 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 432.104 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.93052 -41.25347 -39.19525 -37.91363 -36.78421 -36.50630 -34.54824 -32.54598 -31.15703 -30.00915 -29.26781 -29.01581 -27.82243 -27.75850 -27.32724 -27.16593 -26.38699 -23.66372 -22.17804 -21.02036 -20.34292 -20.16553 -18.84258 -18.51291 -18.16284 -17.67919 -17.10129 -16.61874 -16.12187 -15.97681 -15.95447 -15.60275 -15.19283 -15.05487 -14.81993 -14.71825 -14.69485 -14.46681 -14.40428 -14.07110 -14.02055 -13.91420 -13.78556 -13.53503 -13.32815 -13.19467 -13.13854 -13.12240 -12.89848 -12.88191 -12.87058 -12.75911 -12.66594 -12.33647 -12.26521 -11.76383 -11.74011 -11.65535 -11.51253 -11.31969 -11.20866 -10.90710 -10.69369 -10.29061 -10.02588 -9.96247 -9.83619 -9.30727 0.08358 0.49098 0.82141 1.06128 1.22058 1.42785 1.49497 1.60719 1.81034 1.89964 2.00180 2.13668 2.14509 2.50237 3.14836 3.17311 3.31073 3.43172 3.65835 3.80989 3.86277 4.00041 4.16828 4.17580 4.17878 4.25386 4.32628 4.37888 4.46739 4.49753 4.54552 4.61305 4.63286 4.65954 4.76254 4.79004 4.82990 4.86343 4.87868 4.88646 4.90706 5.06017 5.14722 5.15530 5.26446 5.28348 5.40033 5.47288 5.48683 5.54368 5.55414 5.65189 5.73135 5.77008 6.31965 6.39561 6.84525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.394 5.394 3 C -0.051 4.051 4 C 0.613 3.387 5 O -0.578 6.578 6 N -0.634 5.634 7 C 0.104 3.896 8 C 0.085 3.915 9 O -0.613 6.613 10 Si 1.321 2.679 11 C -0.517 4.517 12 C -0.523 4.523 13 C -0.384 4.384 14 C -0.138 4.138 15 C -0.142 4.142 16 C -0.139 4.139 17 C 0.073 3.927 18 C -0.103 4.103 19 C -0.192 4.192 20 Br -0.008 7.008 21 C 0.054 3.946 22 C -0.066 4.066 23 O -0.538 6.538 24 Si 0.946 3.054 25 H -0.259 1.259 26 H -0.247 1.247 27 H -0.210 1.210 28 H 0.090 0.910 29 H 0.112 0.888 30 H 0.100 0.900 31 H 0.105 0.895 32 H 0.091 0.909 33 H 0.118 0.882 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.077 0.923 37 H 0.069 0.931 38 H 0.076 0.924 39 H 0.071 0.929 40 H 0.063 0.937 41 H 0.043 0.957 42 H 0.060 0.940 43 H 0.061 0.939 44 H 0.047 0.953 45 H 0.065 0.935 46 H 0.059 0.941 47 H 0.044 0.956 48 H 0.058 0.942 49 H 0.113 0.887 50 H 0.118 0.882 51 H 0.181 0.819 52 H 0.136 0.864 53 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.147 0.257 -0.868 3.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 N -0.068 5.068 3 C -0.165 4.165 4 C 0.405 3.595 5 O -0.460 6.460 6 N -0.369 5.369 7 C -0.018 4.018 8 C 0.027 3.973 9 O -0.570 6.570 10 Si 1.451 2.549 11 C -0.619 4.619 12 C -0.624 4.624 13 C -0.426 4.426 14 C -0.195 4.195 15 C -0.199 4.199 16 C -0.196 4.196 17 C -0.048 4.048 18 C -0.129 4.129 19 C -0.278 4.278 20 Br 0.075 6.925 21 C -0.068 4.068 22 C -0.176 4.176 23 O -0.345 6.345 24 Si 0.764 3.236 25 H -0.183 1.183 26 H -0.170 1.170 27 H -0.132 1.132 28 H 0.109 0.891 29 H 0.130 0.870 30 H 0.118 0.882 31 H 0.123 0.877 32 H 0.110 0.890 33 H 0.135 0.865 34 H 0.094 0.906 35 H 0.094 0.906 36 H 0.096 0.904 37 H 0.088 0.912 38 H 0.095 0.905 39 H 0.090 0.910 40 H 0.082 0.918 41 H 0.063 0.937 42 H 0.079 0.921 43 H 0.080 0.920 44 H 0.066 0.934 45 H 0.084 0.916 46 H 0.078 0.922 47 H 0.064 0.936 48 H 0.077 0.923 49 H 0.131 0.869 50 H 0.136 0.864 51 H 0.198 0.802 52 H 0.154 0.846 53 H 0.232 0.768 Dipole moment (debyes) X Y Z Total from point charges 2.123 -0.541 0.078 2.192 hybrid contribution 0.142 0.980 -0.677 1.199 sum 2.265 0.439 -0.599 2.383 Atomic orbital electron populations 1.22627 0.74179 1.06728 1.05372 1.43973 1.07875 1.03829 1.51085 1.19954 0.90430 0.87355 1.18727 1.16472 0.84239 0.82973 0.75854 1.90789 1.17312 1.84741 1.53120 1.49220 1.08735 1.07283 1.71635 1.23676 0.97566 0.78199 1.02337 1.23569 0.88847 0.86118 0.98794 1.85444 1.53983 1.54373 1.63206 0.76153 0.59031 0.63829 0.55882 1.27105 1.11458 1.16820 1.06539 1.27191 1.09617 1.07179 1.18459 1.25974 1.05934 1.09862 1.00876 1.21554 1.00032 1.00883 0.97002 1.21613 0.98691 1.01675 0.97946 1.21559 0.99368 0.97185 1.01459 1.24342 0.79269 0.97788 1.03438 1.21760 0.95706 0.92901 1.02537 1.20894 0.91337 0.95117 1.20418 1.96651 1.35948 1.61848 1.98014 1.21128 0.89706 0.90433 1.05551 1.24882 1.04473 0.86945 1.01296 1.86533 1.27396 1.76089 1.44503 0.85682 0.84476 0.79812 0.73674 1.18282 1.17005 1.13164 0.89118 0.86958 0.88165 0.87708 0.89035 0.86482 0.90611 0.90564 0.90405 0.91185 0.90509 0.91021 0.91782 0.93743 0.92116 0.92006 0.93392 0.91636 0.92192 0.93647 0.92269 0.86949 0.86411 0.80174 0.84625 0.76800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.01 10.29 127.77 1.31 1.32 16 2 N -0.39 -1.52 3.16 -519.61 -1.64 -3.17 16 3 C -0.05 -0.24 6.88 40.35 0.28 0.04 16 4 C 0.61 4.06 8.00 86.45 0.69 4.76 16 5 O -0.58 -7.44 15.31 -4.34 -0.07 -7.51 16 6 N -0.63 -0.33 3.61 -845.96 -3.05 -3.39 16 7 C 0.10 -0.24 8.67 86.48 0.75 0.51 16 8 C 0.08 -0.52 3.74 31.25 0.12 -0.40 16 9 O -0.61 3.23 8.58 -148.98 -1.28 1.95 16 10 Si 1.32 -8.64 8.25 68.60 0.57 -8.07 16 11 C -0.52 3.48 8.65 113.37 0.98 4.46 16 12 C -0.52 2.52 8.63 113.37 0.98 3.50 16 13 C -0.38 1.31 0.53 -10.79 -0.01 1.30 16 14 C -0.14 0.37 7.85 71.98 0.56 0.94 16 15 C -0.14 0.47 7.85 71.98 0.56 1.04 16 16 C -0.14 0.25 7.85 71.98 0.56 0.82 16 17 C 0.07 -0.45 7.03 86.48 0.61 0.16 16 18 C -0.10 -0.13 9.88 22.59 0.22 0.10 16 19 C -0.19 -0.43 6.06 22.03 0.13 -0.30 16 20 Br -0.01 0.00 28.66 -20.37 -0.58 -0.58 16 21 C 0.05 0.14 5.35 41.34 0.22 0.36 16 22 C -0.07 0.00 2.81 71.24 0.20 0.20 16 23 O -0.54 -1.25 12.88 -148.98 -1.92 -3.17 16 24 Si 0.95 -0.43 26.76 68.60 1.84 1.40 16 25 H -0.26 -0.41 7.11 99.48 0.71 0.29 16 26 H -0.25 -0.24 7.11 99.48 0.71 0.47 16 27 H -0.21 0.15 5.32 99.48 0.53 0.68 16 28 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 29 H 0.11 -0.62 7.20 -2.39 -0.02 -0.64 16 30 H 0.10 0.37 6.01 -2.39 -0.01 0.36 16 31 H 0.10 -0.29 8.14 -2.38 -0.02 -0.31 16 32 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 33 H 0.12 -1.10 6.45 -2.39 -0.02 -1.11 16 34 H 0.07 -0.61 7.96 -2.39 -0.02 -0.63 16 35 H 0.08 -0.48 7.79 -2.39 -0.02 -0.50 16 36 H 0.08 -0.53 7.79 -2.38 -0.02 -0.55 16 37 H 0.07 -0.26 7.79 -2.38 -0.02 -0.28 16 38 H 0.08 -0.37 7.79 -2.39 -0.02 -0.39 16 39 H 0.07 -0.41 7.28 -2.39 -0.02 -0.42 16 40 H 0.06 -0.29 7.79 -2.39 -0.02 -0.31 16 41 H 0.04 -0.04 8.14 -2.39 -0.02 -0.06 16 42 H 0.06 -0.17 7.96 -2.39 -0.02 -0.19 16 43 H 0.06 -0.28 7.79 -2.38 -0.02 -0.29 16 44 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 45 H 0.06 -0.33 7.79 -2.39 -0.02 -0.35 16 46 H 0.06 -0.11 7.96 -2.39 -0.02 -0.13 16 47 H 0.04 -0.01 8.14 -2.39 -0.02 -0.03 16 48 H 0.06 -0.17 7.80 -2.39 -0.02 -0.19 16 49 H 0.11 -1.08 6.16 -2.39 -0.01 -1.09 16 50 H 0.12 -0.94 8.14 -2.39 -0.02 -0.96 16 51 H 0.18 -0.77 5.11 -2.91 -0.01 -0.78 16 52 H 0.14 -0.50 6.60 -2.39 -0.02 -0.52 16 53 H 0.38 -0.24 6.39 -74.05 -0.47 -0.72 16 Total: 0.00 -15.87 431.23 3.06 -12.80 By element: Atomic # 1 Polarization: -10.09 SS G_CDS: 1.02 Total: -9.07 kcal Atomic # 6 Polarization: 10.62 SS G_CDS: 8.19 Total: 18.80 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -4.69 Total: -6.55 kcal Atomic # 8 Polarization: -5.47 SS G_CDS: -3.26 Total: -8.73 kcal Atomic # 14 Polarization: -9.07 SS G_CDS: 2.40 Total: -6.67 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.58 Total: -0.58 kcal Total: -15.87 3.06 -12.80 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_5000100.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.791 kcal (2) G-P(sol) polarization free energy of solvation -15.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.596 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds