Wall clock time and date at job start Sun Mar 7 2021 08:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34231 * 117.00061 * 2 1 4 4 O 1.20823 * 119.99923 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99945 * 179.97438 * 3 2 1 6 6 N 1.46507 * 112.85185 * 324.46710 * 5 3 2 7 7 C 1.34775 * 119.99740 * 294.08425 * 6 5 3 8 8 O 1.21284 * 120.00205 * 355.00948 * 7 6 5 9 9 C 1.50700 * 119.99954 * 175.00319 * 7 6 5 10 10 O 1.42896 * 109.47060 * 179.97438 * 9 7 6 11 11 C 1.35987 * 116.99696 * 179.97438 * 10 9 7 12 12 C 1.38674 * 119.99938 * 180.02562 * 11 10 9 13 13 C 1.50706 * 119.99911 * 359.97438 * 12 11 10 14 14 O 1.42899 * 109.47158 * 284.72580 * 13 12 11 15 15 Si 1.86304 * 109.46867 * 164.72412 * 13 12 11 16 16 C 1.38154 * 120.00168 * 179.72668 * 12 11 10 17 17 C 1.38675 * 119.99778 * 0.25481 * 16 12 11 18 18 O 1.35980 * 120.00229 * 179.97438 * 17 16 12 19 19 C 1.42902 * 117.00521 * 179.97438 * 18 17 16 20 20 C 1.38725 * 120.00162 * 359.97438 * 17 16 12 21 21 C 1.38107 * 119.99610 * 359.95968 * 20 17 16 22 22 C 1.53782 * 113.61697 * 193.27009 * 5 3 2 23 23 C 1.53781 * 87.08324 * 219.93645 * 22 5 3 24 24 O 1.42895 * 113.61377 * 270.88257 * 23 22 5 25 25 C 1.52997 * 113.61490 * 140.06567 * 23 22 5 26 26 F 1.39898 * 109.47369 * 59.99423 * 25 23 22 27 27 F 1.39900 * 109.47269 * 179.97438 * 25 23 22 28 28 F 1.39903 * 109.46912 * 299.99822 * 25 23 22 29 29 C 1.53781 * 113.69158 * 95.73423 * 5 3 2 30 30 H 1.09001 * 109.47207 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.46941 * 300.00186 * 1 2 3 32 32 H 1.09001 * 109.46901 * 60.00103 * 1 2 3 33 33 H 0.96996 * 119.99674 * 114.08471 * 6 5 3 34 34 H 1.08997 * 109.46868 * 59.99828 * 9 7 6 35 35 H 1.09005 * 109.46772 * 300.00173 * 9 7 6 36 36 H 1.09002 * 109.46448 * 44.72897 * 13 12 11 37 37 H 0.96697 * 113.99948 * 60.00336 * 14 13 12 38 38 H 1.48492 * 110.00123 * 300.00151 * 15 13 12 39 39 H 1.48504 * 109.99760 * 61.32193 * 15 13 12 40 40 H 1.07997 * 120.00065 * 180.22375 * 16 12 11 41 41 H 1.09003 * 109.47117 * 300.00809 * 19 18 17 42 42 H 1.09002 * 109.46862 * 60.00230 * 19 18 17 43 43 H 1.08993 * 109.47563 * 179.97438 * 19 18 17 44 44 H 1.08000 * 119.99980 * 179.97438 * 20 17 16 45 45 H 1.08001 * 119.99829 * 180.02562 * 21 20 17 46 46 H 1.09004 * 113.61303 * 334.48412 * 22 5 3 47 47 H 1.09002 * 113.61493 * 105.30035 * 22 5 3 48 48 H 0.96694 * 114.00630 * 180.02562 * 24 23 22 49 49 H 1.08994 * 113.61938 * 254.54392 * 29 5 3 50 50 H 1.09002 * 113.61356 * 25.44590 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1917 0.2076 0.7857 7 6 4.0161 0.1621 2.1212 8 8 3.4169 1.0534 2.6847 9 6 4.5641 -0.9963 2.9142 10 8 4.2522 -0.8167 4.2971 11 6 4.6779 -1.7811 5.1562 12 6 4.4088 -1.6698 6.5120 13 6 3.6451 -0.4798 7.0334 14 8 4.5001 0.6651 7.0494 15 14 3.0488 -0.8338 8.7626 16 6 4.8363 -2.6524 7.3840 17 6 5.5392 -3.7473 6.9042 18 8 5.9605 -4.7142 7.7625 19 6 6.6784 -5.8139 7.1993 20 6 5.8125 -3.8563 5.5485 21 6 5.3839 -2.8747 4.6767 22 6 4.1097 2.6767 0.3239 23 6 5.1722 2.4290 -0.7599 24 8 6.3576 1.8017 -0.2667 25 6 5.4654 3.6579 -1.6229 26 9 5.9316 4.6974 -0.8110 27 9 6.4392 3.3376 -2.5749 28 9 4.2937 4.0624 -2.2715 29 6 4.1766 1.4474 -1.4004 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 4.7321 -0.4662 0.3443 34 1 5.6459 -1.0427 2.7891 35 1 4.1169 -1.9243 2.5579 36 1 2.7895 -0.2855 6.3867 37 1 4.8484 0.9080 6.1806 38 1 2.1587 -2.0224 8.7595 39 1 4.2075 -1.0693 9.6611 40 1 4.6236 -2.5675 8.4394 41 1 6.0487 -6.3237 6.4701 42 1 7.5790 -5.4462 6.7075 43 1 6.9556 -6.5104 7.9905 44 1 6.3602 -4.7088 5.1749 45 1 5.5963 -2.9597 3.6212 46 1 3.4158 3.4810 0.0795 47 1 4.5217 2.7641 1.3293 48 1 7.0297 1.6436 -0.9436 49 1 4.6439 0.5421 -1.7877 50 1 3.5010 1.9157 -2.1163 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:33 Heat of formation + Delta-G solvation = -338.570781 kcal Electronic energy + Delta-G solvation = -45388.225501 eV Core-core repulsion = 38935.814893 eV Total energy + Delta-G solvation = -6452.410608 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.136 amu Computer time = 1.73 seconds Orbital eigenvalues (eV) -51.34690 -48.89865 -48.78256 -42.81793 -41.82878 -40.86013 -40.41134 -39.64922 -38.04058 -37.65814 -36.88903 -36.70250 -34.55579 -32.84127 -31.26888 -30.25698 -29.15086 -28.55035 -28.10692 -27.74900 -26.50949 -25.67204 -23.99698 -22.67923 -22.44567 -22.18662 -20.93858 -20.35340 -19.67052 -19.65224 -19.53714 -19.12226 -18.86870 -18.49097 -18.10048 -17.98496 -17.59508 -17.56947 -17.39394 -17.25572 -16.75543 -16.53527 -16.06628 -16.05589 -15.69848 -15.67520 -15.64664 -15.51442 -15.24374 -15.23137 -15.16595 -15.00977 -14.95403 -14.90139 -14.65946 -14.51721 -14.20814 -14.17557 -13.94887 -13.87493 -13.67311 -13.61034 -13.42918 -13.28757 -13.11730 -12.92973 -12.71573 -12.42853 -12.30347 -11.99640 -11.94231 -11.88658 -11.74295 -11.58440 -11.17237 -11.04916 -10.88125 -10.55412 -10.14526 -8.87997 -4.69088 0.01096 0.29147 0.79148 1.10737 1.13954 1.26828 1.50889 1.60704 1.78732 2.04745 2.08962 2.17464 2.23003 2.27778 2.38458 2.50251 2.54479 2.77988 3.09653 3.22251 3.24193 3.48289 3.54963 3.60638 3.68413 3.75186 3.86830 3.91125 3.97832 4.02385 4.04367 4.06998 4.08238 4.09828 4.12500 4.18414 4.26950 4.28990 4.43482 4.49222 4.52263 4.57411 4.59079 4.89258 4.98801 5.05384 5.12229 5.20413 5.33636 5.81411 5.92510 6.09588 6.32201 6.51921 6.74939 6.82284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.351 6.351 3 C 0.471 3.529 4 O -0.484 6.484 5 C 0.175 3.825 6 N -0.693 5.693 7 C 0.524 3.476 8 O -0.499 6.499 9 C 0.045 3.955 10 O -0.288 6.288 11 C 0.102 3.898 12 C -0.095 4.095 13 C -0.076 4.076 14 O -0.533 6.533 15 Si 0.747 3.253 16 C -0.115 4.115 17 C 0.104 3.896 18 O -0.316 6.316 19 C 0.026 3.974 20 C -0.164 4.164 21 C -0.163 4.163 22 C -0.101 4.101 23 C 0.067 3.933 24 O -0.503 6.503 25 C 0.439 3.561 26 F -0.169 7.169 27 F -0.179 7.179 28 F -0.170 7.170 29 C -0.143 4.143 30 H 0.105 0.895 31 H 0.067 0.933 32 H 0.066 0.934 33 H 0.413 0.587 34 H 0.098 0.902 35 H 0.097 0.903 36 H 0.080 0.920 37 H 0.368 0.632 38 H -0.249 1.249 39 H -0.251 1.251 40 H 0.139 0.861 41 H 0.056 0.944 42 H 0.057 0.943 43 H 0.103 0.897 44 H 0.137 0.863 45 H 0.135 0.865 46 H 0.134 0.866 47 H 0.117 0.883 48 H 0.393 0.607 49 H 0.115 0.885 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.917 -6.798 -5.565 8.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.311 3.689 4 O -0.369 6.369 5 C 0.085 3.915 6 N -0.350 5.350 7 C 0.309 3.691 8 O -0.371 6.371 9 C -0.034 4.034 10 O -0.201 6.201 11 C 0.057 3.943 12 C -0.097 4.097 13 C -0.184 4.184 14 O -0.338 6.338 15 Si 0.645 3.355 16 C -0.134 4.134 17 C 0.059 3.941 18 O -0.230 6.230 19 C -0.069 4.069 20 C -0.183 4.183 21 C -0.182 4.182 22 C -0.139 4.139 23 C 0.022 3.978 24 O -0.310 6.310 25 C 0.384 3.616 26 F -0.150 7.150 27 F -0.161 7.161 28 F -0.151 7.151 29 C -0.181 4.181 30 H 0.123 0.877 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.250 0.750 34 H 0.116 0.884 35 H 0.115 0.885 36 H 0.098 0.902 37 H 0.216 0.784 38 H -0.173 1.173 39 H -0.176 1.176 40 H 0.156 0.844 41 H 0.075 0.925 42 H 0.075 0.925 43 H 0.121 0.879 44 H 0.154 0.846 45 H 0.153 0.847 46 H 0.152 0.848 47 H 0.136 0.864 48 H 0.244 0.756 49 H 0.133 0.867 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.621 -6.241 -3.059 6.978 hybrid contribution 1.571 -1.076 -3.009 3.561 sum 2.193 -7.317 -6.068 9.756 Atomic orbital electron populations 1.23384 0.75429 1.04178 1.03022 1.86483 1.24056 1.32655 1.83548 1.23293 0.90684 0.82092 0.72845 1.90728 1.65878 1.36297 1.43952 1.20643 0.85732 0.90737 0.94361 1.45182 1.53646 1.29823 1.06386 1.20062 0.79998 0.87220 0.81808 1.90831 1.39368 1.37529 1.69361 1.22369 1.01871 0.97725 0.81417 1.86106 1.74638 1.43849 1.15490 1.18593 0.97355 0.89154 0.89166 1.19492 1.01874 0.98151 0.90145 1.25210 0.94403 0.84229 1.14577 1.86700 1.66841 1.45112 1.35152 0.93093 0.82794 0.84424 0.75190 1.20131 1.00530 0.92827 0.99864 1.18805 0.96552 0.89852 0.88872 1.86115 1.70316 1.31509 1.35016 1.23112 0.95434 0.87508 1.00822 1.21084 1.04177 1.01007 0.92049 1.21037 1.01946 0.94738 1.00461 1.23499 0.93939 0.95600 1.00862 1.23317 0.88439 0.89678 0.96316 1.86679 1.26198 1.79600 1.38475 1.20938 0.74755 0.86321 0.79600 1.93258 1.88677 1.60684 1.72376 1.93204 1.63882 1.92589 1.66410 1.93226 1.47894 1.91606 1.82424 1.24047 0.97918 1.01462 0.94644 0.87703 0.91471 0.91478 0.74984 0.88422 0.88479 0.90246 0.78408 1.17335 1.17561 0.84374 0.92505 0.92481 0.87850 0.84569 0.84683 0.84837 0.86445 0.75586 0.86682 0.85286 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.35 -0.29 10.42 -39.26 -0.41 -0.70 16 3 C 0.47 0.84 6.59 36.00 0.24 1.08 16 4 O -0.48 -2.21 15.66 -18.75 -0.29 -2.50 16 5 C 0.17 -0.19 1.00 -132.16 -0.13 -0.33 16 6 N -0.69 1.93 4.53 -47.92 -0.22 1.72 16 7 C 0.52 0.01 7.46 -10.99 -0.08 -0.07 16 8 O -0.50 -2.27 15.04 -14.36 -0.22 -2.49 16 9 C 0.04 -0.10 5.22 36.01 0.19 0.09 16 10 O -0.29 -0.45 8.58 -39.61 -0.34 -0.79 16 11 C 0.10 0.19 6.62 -39.24 -0.26 -0.07 16 12 C -0.10 -0.31 5.27 -104.49 -0.55 -0.86 16 13 C -0.08 -0.22 2.33 36.01 0.08 -0.14 16 14 O -0.53 -2.03 12.65 -35.23 -0.45 -2.47 16 15 Si 0.75 1.23 30.40 -169.99 -5.17 -3.94 16 16 C -0.12 -0.43 8.59 -39.45 -0.34 -0.77 16 17 C 0.10 0.29 6.69 -39.24 -0.26 0.03 16 18 O -0.32 -0.82 10.50 -19.68 -0.21 -1.03 16 19 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 20 C -0.16 -0.07 9.03 -39.45 -0.36 -0.43 16 21 C -0.16 0.02 9.03 -39.45 -0.36 -0.33 16 22 C -0.10 0.00 5.98 -25.92 -0.15 -0.15 16 23 C 0.07 -0.16 1.36 -89.81 -0.12 -0.29 16 24 O -0.50 1.87 12.91 -35.23 -0.45 1.41 16 25 C 0.44 -0.34 2.85 37.16 0.11 -0.23 16 26 F -0.17 -0.22 17.18 2.25 0.04 -0.18 16 27 F -0.18 0.20 16.65 2.25 0.04 0.24 16 28 F -0.17 -0.03 15.76 2.25 0.04 0.01 16 29 C -0.14 0.56 6.63 -25.92 -0.17 0.39 16 30 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 32 H 0.07 -0.08 8.13 -51.93 -0.42 -0.50 16 33 H 0.41 -2.61 8.66 -40.82 -0.35 -2.96 16 34 H 0.10 -0.45 7.65 -51.93 -0.40 -0.85 16 35 H 0.10 -0.43 7.67 -51.93 -0.40 -0.83 16 36 H 0.08 0.21 7.82 -51.93 -0.41 -0.19 16 37 H 0.37 0.88 8.63 45.56 0.39 1.28 16 38 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 39 H -0.25 -0.97 6.81 56.52 0.38 -0.59 16 40 H 0.14 0.53 4.94 -52.49 -0.26 0.27 16 41 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 42 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 43 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 44 H 0.14 -0.28 6.29 -52.49 -0.33 -0.61 16 45 H 0.14 -0.47 6.29 -52.49 -0.33 -0.80 16 46 H 0.13 0.09 7.09 -51.93 -0.37 -0.28 16 47 H 0.12 0.18 7.19 -51.93 -0.37 -0.20 16 48 H 0.39 -2.78 8.42 45.56 0.38 -2.40 16 49 H 0.11 -0.79 8.09 -51.93 -0.42 -1.21 16 50 H 0.13 -0.49 7.10 -51.93 -0.37 -0.86 16 LS Contribution 432.94 15.07 6.52 6.52 Total: 0.00 -12.16 432.94 -6.16 -18.32 By element: Atomic # 1 Polarization: -9.09 SS G_CDS: -4.93 Total: -14.02 kcal Atomic # 6 Polarization: 0.03 SS G_CDS: -0.11 Total: -0.09 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -0.22 Total: 1.72 kcal Atomic # 8 Polarization: -6.21 SS G_CDS: -2.37 Total: -8.58 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.11 Total: 0.07 kcal Atomic # 14 Polarization: 1.23 SS G_CDS: -5.17 Total: -3.94 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -12.16 -6.16 -18.32 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -320.250 kcal (2) G-P(sol) polarization free energy of solvation -12.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -332.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.158 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -338.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.73 seconds