Wall clock time and date at job start Sun Mar 7 2021 08:59:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34223 * 117.00098 * 2 1 4 4 O 1.20820 * 120.00330 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99937 * 179.97438 * 3 2 1 6 6 N 1.46505 * 112.85201 * 324.47364 * 5 3 2 7 7 C 1.34777 * 119.99788 * 294.08270 * 6 5 3 8 8 O 1.21279 * 119.99915 * 355.00263 * 7 6 5 9 9 C 1.50697 * 119.99743 * 175.00706 * 7 6 5 10 10 N 1.46507 * 109.46776 * 179.97438 * 9 7 6 11 11 C 1.36831 * 125.05998 * 265.03352 * 10 9 7 12 12 C 1.34240 * 109.93295 * 179.97438 * 11 10 9 13 13 C 1.50704 * 126.49478 * 179.97438 * 12 11 10 14 14 O 1.42891 * 109.46971 * 105.03087 * 13 12 11 15 15 Si 1.86298 * 109.47149 * 345.02733 * 13 12 11 16 16 C 1.46490 * 107.00327 * 0.02562 * 12 11 10 17 17 C 1.39588 * 134.03389 * 179.97438 * 16 12 11 18 18 C 1.36659 * 119.76259 * 180.02562 * 17 16 12 19 19 C 1.38787 * 120.52870 * 0.02562 * 18 17 16 20 20 C 1.37791 * 120.66601 * 359.97218 * 19 18 17 21 21 C 1.37694 * 125.05862 * 85.00239 * 10 9 7 22 22 C 1.53786 * 113.61697 * 193.27256 * 5 3 2 23 23 C 1.53779 * 87.08307 * 219.93936 * 22 5 3 24 24 O 1.42897 * 113.61334 * 270.80043 * 23 22 5 25 25 C 1.52996 * 113.61673 * 139.98295 * 23 22 5 26 26 F 1.39903 * 109.47255 * 59.99517 * 25 23 22 27 27 F 1.39892 * 109.47445 * 179.97438 * 25 23 22 28 28 F 1.39899 * 109.46997 * 300.00077 * 25 23 22 29 29 C 1.53781 * 113.68744 * 95.74126 * 5 3 2 30 30 H 1.08996 * 109.47232 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.47137 * 299.99837 * 1 2 3 32 32 H 1.09006 * 109.47139 * 59.99646 * 1 2 3 33 33 H 0.96999 * 120.00178 * 114.07933 * 6 5 3 34 34 H 1.08996 * 109.47539 * 59.99759 * 9 7 6 35 35 H 1.08998 * 109.46652 * 299.99561 * 9 7 6 36 36 H 1.07997 * 125.03401 * 359.97330 * 11 10 9 37 37 H 1.08998 * 109.46685 * 225.02751 * 13 12 11 38 38 H 0.96698 * 114.00202 * 180.02562 * 14 13 12 39 39 H 1.48498 * 109.99865 * 60.00417 * 15 13 12 40 40 H 1.48504 * 109.99534 * 181.31734 * 15 13 12 41 41 H 1.08001 * 120.11916 * 0.03884 * 17 16 12 42 42 H 1.07999 * 119.73560 * 180.28030 * 18 17 16 43 43 H 1.08003 * 119.66937 * 179.97438 * 19 18 17 44 44 H 1.08001 * 120.10826 * 180.02562 * 20 19 18 45 45 H 1.08995 * 113.61144 * 334.48801 * 22 5 3 46 46 H 1.09000 * 113.61114 * 105.39062 * 22 5 3 47 47 H 0.96698 * 114.00523 * 179.97438 * 24 23 22 48 48 H 1.09000 * 113.61264 * 254.54026 * 29 5 3 49 49 H 1.08992 * 113.61614 * 25.44024 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1917 0.2074 0.7855 7 6 4.0161 0.1618 2.1210 8 8 3.4170 1.0530 2.6847 9 6 4.5642 -0.9966 2.9139 10 7 4.2445 -0.8127 4.3317 11 6 5.0765 -0.2449 5.2579 12 6 4.4796 -0.2284 6.4601 13 6 5.0602 0.3115 7.7418 14 8 4.4485 1.5653 8.0507 15 14 6.8969 0.5496 7.5396 16 6 3.1574 -0.8358 6.2904 17 6 2.0922 -1.0984 7.1535 18 6 0.9607 -1.6949 6.6726 19 6 0.8619 -2.0425 5.3326 20 6 1.9013 -1.7924 4.4633 21 6 3.0618 -1.1849 4.9306 22 6 4.1097 2.6766 0.3240 23 6 5.1721 2.4290 -0.7599 24 8 6.3583 1.8034 -0.2664 25 6 5.4638 3.6573 -1.6241 26 9 5.9292 4.6981 -0.8133 27 9 6.4377 3.3372 -2.5760 28 9 4.2916 4.0602 -2.2728 29 6 4.1765 1.4475 -1.4004 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 4.7320 -0.4664 0.3441 34 1 5.6459 -1.0431 2.7888 35 1 4.1170 -1.9246 2.5576 36 1 6.0667 0.1339 5.0520 37 1 4.8722 -0.3938 8.5512 38 1 4.7751 1.9723 8.8649 39 1 7.1665 1.5091 6.4389 40 1 7.4863 1.0516 8.8068 41 1 2.1620 -0.8309 8.1975 42 1 0.1350 -1.8938 7.3398 43 1 -0.0387 -2.5137 4.9675 44 1 1.8147 -2.0663 3.4222 45 1 3.4158 3.4808 0.0797 46 1 4.5231 2.7635 1.3288 47 1 7.0301 1.6446 -0.9435 48 1 4.6438 0.5421 -1.7877 49 1 3.5009 1.9157 -2.1162 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:28 Heat of formation + Delta-G solvation = -224.763422 kcal Electronic energy + Delta-G solvation = -44596.619667 eV Core-core repulsion = 38464.630309 eV Total energy + Delta-G solvation = -6131.989358 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.132 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -51.34922 -48.89999 -48.78538 -42.85226 -42.32859 -40.77070 -39.98625 -37.96531 -37.65444 -37.59717 -36.72373 -34.62052 -33.98320 -31.41499 -30.17598 -29.99338 -28.89361 -28.47839 -27.73846 -25.94206 -25.38456 -23.68759 -22.92701 -22.55275 -21.92299 -20.92039 -20.45283 -20.32597 -19.65712 -19.59457 -19.08767 -18.68253 -18.33900 -18.12651 -17.94483 -17.61042 -17.48938 -17.22543 -16.53185 -16.38100 -16.28997 -15.85262 -15.78291 -15.65203 -15.62729 -15.24536 -15.23486 -15.09805 -14.97725 -14.94128 -14.84321 -14.73599 -14.62498 -14.47447 -14.40474 -14.19024 -13.99207 -13.93238 -13.64181 -13.44415 -13.42036 -13.24441 -12.90439 -12.64215 -12.46248 -12.39452 -12.38017 -11.97263 -11.92868 -11.87122 -11.72802 -11.58150 -11.16947 -10.52004 -10.39902 -10.25185 -8.99887 -8.51058 -4.92113 0.29512 0.76860 0.87185 1.12700 1.27272 1.28735 1.38146 1.62211 1.63241 1.74183 1.87779 2.03072 2.06008 2.24060 2.37011 2.54525 2.80211 3.07766 3.12385 3.23666 3.32937 3.48370 3.60998 3.69435 3.73280 3.82587 3.88038 3.90177 3.99214 4.05631 4.09353 4.09489 4.19662 4.30087 4.33159 4.37689 4.46834 4.53370 4.57872 4.71867 4.81589 4.92185 4.93572 5.01225 5.22227 5.27467 5.66525 5.81529 5.82368 5.87498 5.91800 5.99292 6.28573 6.37882 6.54209 6.64558 6.85711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.351 6.351 3 C 0.472 3.528 4 O -0.485 6.485 5 C 0.173 3.827 6 N -0.695 5.695 7 C 0.497 3.503 8 O -0.501 6.501 9 C 0.097 3.903 10 N -0.467 5.467 11 C 0.073 3.927 12 C -0.150 4.150 13 C -0.037 4.037 14 O -0.534 6.534 15 Si 0.678 3.322 16 C -0.085 4.085 17 C -0.065 4.065 18 C -0.145 4.145 19 C -0.098 4.098 20 C -0.126 4.126 21 C 0.110 3.890 22 C -0.101 4.101 23 C 0.067 3.933 24 O -0.502 6.502 25 C 0.438 3.562 26 F -0.169 7.169 27 F -0.179 7.179 28 F -0.170 7.170 29 C -0.143 4.143 30 H 0.105 0.895 31 H 0.066 0.934 32 H 0.066 0.934 33 H 0.413 0.587 34 H 0.127 0.873 35 H 0.122 0.878 36 H 0.170 0.830 37 H 0.072 0.928 38 H 0.375 0.625 39 H -0.255 1.255 40 H -0.260 1.260 41 H 0.121 0.879 42 H 0.122 0.878 43 H 0.124 0.876 44 H 0.115 0.885 45 H 0.132 0.868 46 H 0.115 0.885 47 H 0.393 0.607 48 H 0.115 0.885 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.037 -8.392 -3.600 9.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.311 3.689 4 O -0.370 6.370 5 C 0.084 3.916 6 N -0.351 5.351 7 C 0.281 3.719 8 O -0.373 6.373 9 C -0.029 4.029 10 N -0.150 5.150 11 C -0.052 4.052 12 C -0.157 4.157 13 C -0.147 4.147 14 O -0.341 6.341 15 Si 0.579 3.421 16 C -0.089 4.089 17 C -0.084 4.084 18 C -0.165 4.165 19 C -0.117 4.117 20 C -0.147 4.147 21 C 0.005 3.995 22 C -0.139 4.139 23 C 0.023 3.977 24 O -0.309 6.309 25 C 0.384 3.616 26 F -0.151 7.151 27 F -0.161 7.161 28 F -0.152 7.152 29 C -0.180 4.180 30 H 0.123 0.877 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.250 0.750 34 H 0.145 0.855 35 H 0.140 0.860 36 H 0.187 0.813 37 H 0.090 0.910 38 H 0.222 0.778 39 H -0.180 1.180 40 H -0.185 1.185 41 H 0.139 0.861 42 H 0.140 0.860 43 H 0.142 0.858 44 H 0.133 0.867 45 H 0.150 0.850 46 H 0.133 0.867 47 H 0.244 0.756 48 H 0.133 0.867 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 3.479 -6.992 -3.477 8.549 hybrid contribution -0.121 0.878 -0.353 0.954 sum 3.358 -6.114 -3.829 7.957 Atomic orbital electron populations 1.23375 0.75491 1.04158 1.02973 1.86474 1.23994 1.32648 1.83567 1.23306 0.90716 0.82074 0.72791 1.90726 1.65930 1.36343 1.43985 1.20640 0.85745 0.90852 0.94372 1.45366 1.53479 1.29586 1.06674 1.21170 0.80371 0.88324 0.82011 1.90868 1.39471 1.37558 1.69381 1.21523 1.03827 0.97769 0.79788 1.43156 1.13243 1.52704 1.05907 1.21509 0.96593 0.99465 0.87636 1.19416 0.94867 1.07890 0.93569 1.24020 1.07944 0.86851 0.95934 1.86676 1.65091 1.35413 1.46931 0.95436 0.75597 0.89583 0.81479 1.18945 0.94716 1.02818 0.92445 1.20269 0.91832 0.97237 0.99038 1.20656 0.98239 1.01805 0.95756 1.20807 0.97745 0.99795 0.93330 1.19952 0.91803 1.03334 0.99609 1.18142 0.87886 1.01385 0.92047 1.23476 0.93950 0.95745 1.00703 1.23310 0.88412 0.89682 0.96284 1.86674 1.26147 1.79692 1.38426 1.20950 0.74743 0.86322 0.79625 1.93257 1.88709 1.60637 1.72462 1.93201 1.63864 1.92587 1.66408 1.93225 1.47859 1.91651 1.82422 1.24037 0.97874 1.01427 0.94705 0.87661 0.91547 0.91540 0.75004 0.85495 0.85965 0.81331 0.91047 0.77779 1.17958 1.18504 0.86107 0.85971 0.85775 0.86673 0.85003 0.86697 0.75594 0.86664 0.85392 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.35 -0.40 10.41 -39.24 -0.41 -0.81 16 3 C 0.47 1.11 6.59 36.01 0.24 1.34 16 4 O -0.49 -2.61 15.66 -18.75 -0.29 -2.90 16 5 C 0.17 -0.11 1.00 -132.15 -0.13 -0.25 16 6 N -0.69 1.84 4.54 -47.92 -0.22 1.62 16 7 C 0.50 0.10 7.45 -10.99 -0.08 0.02 16 8 O -0.50 -2.77 14.96 5.56 0.08 -2.68 16 9 C 0.10 -0.25 6.48 -5.19 -0.03 -0.28 16 10 N -0.47 -0.72 2.27 -115.71 -0.26 -0.98 16 11 C 0.07 0.13 9.89 -16.73 -0.17 -0.03 16 12 C -0.15 -0.51 5.61 -102.71 -0.58 -1.09 16 13 C -0.04 -0.06 3.05 36.01 0.11 0.05 16 14 O -0.53 -1.85 12.86 -35.23 -0.45 -2.31 16 15 Si 0.68 -0.18 30.79 -169.99 -5.23 -5.41 16 16 C -0.09 -0.40 6.35 -105.14 -0.67 -1.06 16 17 C -0.07 -0.25 10.05 -39.65 -0.40 -0.65 16 18 C -0.15 -0.39 9.97 -39.95 -0.40 -0.79 16 19 C -0.10 -0.21 10.01 -39.54 -0.40 -0.61 16 20 C -0.13 -0.32 10.00 -39.43 -0.39 -0.72 16 21 C 0.11 0.40 6.80 -83.99 -0.57 -0.17 16 22 C -0.10 -0.07 5.98 -25.92 -0.15 -0.22 16 23 C 0.07 -0.14 1.36 -89.81 -0.12 -0.26 16 24 O -0.50 1.78 12.92 -35.23 -0.46 1.32 16 25 C 0.44 -0.16 2.85 37.16 0.11 -0.06 16 26 F -0.17 -0.30 17.18 2.25 0.04 -0.26 16 27 F -0.18 0.16 16.65 2.25 0.04 0.19 16 28 F -0.17 -0.11 15.75 2.25 0.04 -0.07 16 29 C -0.14 0.51 6.63 -25.92 -0.17 0.33 16 30 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 31 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 32 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 33 H 0.41 -2.63 8.66 -40.82 -0.35 -2.98 16 34 H 0.13 -0.77 8.12 -51.93 -0.42 -1.19 16 35 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 36 H 0.17 -0.12 6.30 -52.49 -0.33 -0.45 16 37 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 38 H 0.37 -0.33 8.74 45.56 0.40 0.06 16 39 H -0.25 -0.66 7.04 56.52 0.40 -0.26 16 40 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 41 H 0.12 0.32 8.06 -52.49 -0.42 -0.11 16 42 H 0.12 0.08 8.06 -52.49 -0.42 -0.34 16 43 H 0.12 -0.01 8.06 -52.48 -0.42 -0.44 16 44 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 45 H 0.13 0.21 7.09 -51.93 -0.37 -0.16 16 46 H 0.11 0.29 7.20 -51.93 -0.37 -0.08 16 47 H 0.39 -2.74 8.42 45.56 0.38 -2.36 16 48 H 0.12 -0.76 8.09 -51.93 -0.42 -1.18 16 49 H 0.13 -0.42 7.09 -51.93 -0.37 -0.79 16 LS Contribution 431.22 15.07 6.50 6.50 Total: 0.00 -14.63 431.22 -8.23 -22.86 By element: Atomic # 1 Polarization: -8.83 SS G_CDS: -4.85 Total: -13.68 kcal Atomic # 6 Polarization: -0.65 SS G_CDS: -2.74 Total: -3.39 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.48 Total: 0.65 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -1.53 Total: -7.38 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.11 Total: -0.14 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.23 Total: -5.41 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -14.63 -8.23 -22.86 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -201.908 kcal (2) G-P(sol) polarization free energy of solvation -14.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -224.763 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds