Wall clock time and date at job start Sun Mar 7 2021 19:43:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09000 * 109.47730 * 2 1 4 4 C 1.53000 * 109.46930 * 120.00379 * 2 1 3 5 5 C 1.53002 * 109.47167 * 179.97438 * 4 2 1 6 6 C 1.53000 * 109.46826 * 299.99742 * 5 4 2 7 7 H 1.09002 * 109.46966 * 299.99677 * 6 5 4 8 8 N 1.46501 * 109.47213 * 180.02562 * 6 5 4 9 9 C 1.34782 * 119.99924 * 84.99801 * 8 6 5 10 10 O 1.21693 * 119.99939 * 5.16252 * 9 8 6 11 11 C 1.46678 * 119.99991 * 185.16358 * 9 8 6 12 12 C 1.37869 * 126.23264 * 354.30435 * 11 9 8 13 13 C 1.39829 * 107.08708 * 179.97438 * 12 11 9 14 14 C 1.50706 * 126.07235 * 180.02562 * 13 12 11 15 15 O 1.42899 * 109.46863 * 64.99959 * 14 13 12 16 16 Si 1.86297 * 109.47306 * 185.00401 * 14 13 12 17 17 C 1.35450 * 107.86552 * 0.26846 * 13 12 11 18 18 N 1.35533 * 108.87159 * 359.56660 * 17 13 12 19 19 C 1.46499 * 125.68217 * 180.17461 * 18 17 13 20 20 C 1.52991 * 109.47503 * 59.99844 * 6 5 4 21 21 C 1.52997 * 109.47287 * 300.00432 * 20 6 5 22 22 H 1.09000 * 109.47730 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46951 * 300.00535 * 1 2 3 24 24 H 1.09002 * 109.47273 * 59.99700 * 1 2 3 25 25 H 1.09000 * 109.47052 * 299.99151 * 4 2 1 26 26 H 1.09002 * 109.47652 * 59.99608 * 4 2 1 27 27 H 1.09002 * 109.47510 * 179.97438 * 5 4 2 28 28 H 1.09000 * 109.47541 * 59.99591 * 5 4 2 29 29 H 0.96994 * 120.00085 * 265.00405 * 8 6 5 30 30 H 1.08000 * 126.45953 * 359.97438 * 12 11 9 31 31 H 1.09004 * 109.46443 * 305.00237 * 14 13 12 32 32 H 0.96708 * 113.99323 * 180.02562 * 15 14 13 33 33 H 1.48505 * 109.99786 * 178.67942 * 16 14 13 34 34 H 1.48501 * 110.00027 * 299.99405 * 16 14 13 35 35 H 1.08005 * 125.57123 * 179.73476 * 17 13 12 36 36 H 1.08999 * 109.47081 * 274.25942 * 19 18 17 37 37 H 1.09004 * 109.47143 * 34.25954 * 19 18 17 38 38 H 1.09005 * 109.47430 * 154.25841 * 19 18 17 39 39 H 1.09002 * 109.47146 * 59.99943 * 20 6 5 40 40 H 1.09002 * 109.47695 * 179.97438 * 20 6 5 41 41 H 1.09005 * 109.47463 * 179.97438 * 21 20 6 42 42 H 1.09000 * 109.47085 * 299.99582 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0399 -0.7213 1.2492 5 6 3.5699 -0.7219 1.2489 6 6 4.0794 -1.4435 -0.0003 7 1 3.7156 -2.4711 -0.0001 8 7 5.5444 -1.4447 -0.0004 9 6 6.2175 -2.4014 0.6692 10 8 5.6120 -3.3168 1.1948 11 6 7.6799 -2.3391 0.7643 12 6 8.4997 -1.4293 0.1309 13 6 9.8136 -1.7337 0.5000 14 6 11.0533 -1.0042 0.0504 15 8 11.0294 0.3320 0.5563 16 14 12.5617 -1.8861 0.6966 17 6 9.7749 -2.8041 1.3291 18 7 8.4837 -3.1780 1.5025 19 6 8.0210 -4.2930 2.3324 20 6 3.5694 -0.7224 -1.2495 21 6 2.0395 -0.7217 -1.2492 22 1 -0.3634 -1.0276 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5139 -0.8900 25 1 1.6767 -0.2075 2.1392 26 1 1.6765 -1.7490 1.2493 27 1 3.9333 -1.2354 2.1391 28 1 3.9337 0.3056 1.2487 29 1 6.0299 -0.7570 -0.4821 30 1 8.1862 -0.6318 -0.5264 31 1 11.0854 -0.9798 -1.0389 32 1 11.7987 0.8615 0.3051 33 1 13.7916 -1.1946 0.2335 34 1 12.5297 -1.9261 2.1807 35 1 10.6327 -3.2803 1.7808 36 1 8.0528 -5.2153 1.7523 37 1 8.6679 -4.3898 3.2044 38 1 6.9981 -4.1036 2.6580 39 1 3.9331 0.3052 -1.2498 40 1 3.9327 -1.2362 -2.1396 41 1 1.6761 -0.2075 -2.1390 42 1 1.6756 -1.7492 -1.2490 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_10803934.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:43:44 Heat of formation + Delta-G solvation = -34.509864 kcal Electronic energy + Delta-G solvation = -22168.060269 eV Core-core repulsion = 18921.633989 eV Total energy + Delta-G solvation = -3246.426280 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.162 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.47459 -40.68804 -39.05998 -37.75308 -35.71900 -33.98325 -32.44699 -31.79110 -30.55635 -28.37500 -26.91354 -25.57769 -23.87745 -23.63439 -22.01602 -21.13651 -20.79766 -20.17415 -18.61547 -18.36313 -17.20769 -17.02159 -16.59473 -15.93030 -15.76018 -15.31111 -15.27519 -15.16898 -15.08505 -14.83573 -14.30396 -14.19246 -13.97249 -13.67115 -13.55574 -13.27053 -13.21696 -13.16093 -13.09105 -12.56981 -12.45719 -12.11835 -11.95079 -11.86568 -11.68284 -11.32721 -11.12397 -10.86723 -10.34569 -10.03590 -9.62228 -9.18162 -4.94216 0.52358 1.32804 1.55639 1.59650 1.68576 1.99790 2.35769 2.45588 3.49692 3.61541 3.69036 3.76613 3.91409 3.92809 3.97160 4.05864 4.14834 4.17860 4.31527 4.38706 4.41265 4.45773 4.49938 4.53794 4.60813 4.69232 4.72719 4.77802 4.83415 4.89458 4.96679 5.03643 5.13285 5.16621 5.20958 5.25692 5.29350 5.37052 5.49299 5.54529 5.73371 5.97198 6.17996 6.53726 6.55273 7.25039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.112 4.112 5 C -0.129 4.129 6 C 0.148 3.852 7 H 0.091 0.909 8 N -0.716 5.716 9 C 0.593 3.407 10 O -0.547 6.547 11 C -0.054 4.054 12 C -0.113 4.113 13 C -0.162 4.162 14 C -0.038 4.038 15 O -0.537 6.537 16 Si 0.677 3.323 17 C 0.029 3.971 18 N -0.404 5.404 19 C 0.063 3.937 20 C -0.127 4.127 21 C -0.111 4.111 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.066 0.934 26 H 0.065 0.935 27 H 0.066 0.934 28 H 0.065 0.935 29 H 0.403 0.597 30 H 0.144 0.856 31 H 0.072 0.928 32 H 0.376 0.624 33 H -0.262 1.262 34 H -0.255 1.255 35 H 0.173 0.827 36 H 0.081 0.919 37 H 0.084 0.916 38 H 0.105 0.895 39 H 0.069 0.931 40 H 0.071 0.929 41 H 0.069 0.931 42 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.018 -0.113 -2.504 2.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.150 4.150 5 C -0.168 4.168 6 C 0.044 3.956 7 H 0.109 0.891 8 N -0.367 5.367 9 C 0.381 3.619 10 O -0.426 6.426 11 C -0.167 4.167 12 C -0.139 4.139 13 C -0.168 4.168 14 C -0.148 4.148 15 O -0.344 6.344 16 Si 0.579 3.421 17 C -0.107 4.107 18 N -0.076 5.076 19 C -0.078 4.078 20 C -0.165 4.165 21 C -0.149 4.149 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.084 0.916 26 H 0.084 0.916 27 H 0.085 0.915 28 H 0.083 0.917 29 H 0.237 0.763 30 H 0.162 0.838 31 H 0.090 0.910 32 H 0.224 0.776 33 H -0.187 1.187 34 H -0.180 1.180 35 H 0.190 0.810 36 H 0.099 0.901 37 H 0.103 0.897 38 H 0.124 0.876 39 H 0.088 0.912 40 H 0.089 0.911 41 H 0.087 0.913 42 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.563 -1.230 -1.139 1.769 hybrid contribution 0.526 1.592 -0.280 1.700 sum 1.089 0.362 -1.418 1.825 Atomic orbital electron populations 1.21834 0.94986 1.01993 1.01835 1.21188 0.95722 0.99692 0.94734 0.91073 1.21562 0.94494 1.01111 0.97823 1.21931 0.96031 1.00853 0.97988 1.21035 0.78176 1.01193 0.95202 0.89095 1.45729 1.07312 1.30338 1.53307 1.16952 0.84960 0.81722 0.78265 1.90790 1.70019 1.34139 1.47697 1.20021 0.91371 0.99230 1.06074 1.21160 0.91894 0.98999 1.01848 1.18575 0.94126 0.99167 1.04926 1.24010 1.03651 0.86485 1.00700 1.86615 1.47184 1.22827 1.77757 0.95353 0.75389 0.89667 0.81725 1.21782 0.86443 0.99785 1.02736 1.43769 1.05332 1.23995 1.34487 1.22368 1.03382 0.87577 0.94440 1.21812 0.96689 1.00980 0.97008 1.21548 0.93991 1.01298 0.98045 0.92576 0.92600 0.92587 0.91557 0.91614 0.91535 0.91653 0.76256 0.83819 0.90986 0.77620 1.18695 1.17990 0.80989 0.90085 0.89746 0.87621 0.91221 0.91077 0.91263 0.91510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 9.19 37.15 0.34 0.47 16 2 C -0.09 0.08 2.72 -90.62 -0.25 -0.16 16 3 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 4 C -0.11 0.01 5.20 -26.73 -0.14 -0.12 16 5 C -0.13 -0.08 5.50 -26.73 -0.15 -0.22 16 6 C 0.15 0.06 2.50 -67.93 -0.17 -0.11 16 7 H 0.09 0.21 7.51 -51.93 -0.39 -0.18 16 8 N -0.72 -0.47 5.06 -55.12 -0.28 -0.75 16 9 C 0.59 1.98 7.73 -12.85 -0.10 1.88 16 10 O -0.55 -3.26 14.29 5.20 0.07 -3.19 16 11 C -0.05 -0.15 6.88 -81.98 -0.56 -0.72 16 12 C -0.11 -0.21 10.29 -39.12 -0.40 -0.62 16 13 C -0.16 -0.28 5.46 -105.02 -0.57 -0.85 16 14 C -0.04 -0.01 3.01 36.01 0.11 0.10 16 15 O -0.54 -0.82 12.86 -35.23 -0.45 -1.27 16 16 Si 0.68 -0.65 30.60 -169.99 -5.20 -5.85 16 17 C 0.03 0.03 9.94 -16.91 -0.17 -0.14 16 18 N -0.40 -0.82 3.16 -120.23 -0.38 -1.20 16 19 C 0.06 0.00 10.64 59.85 0.64 0.64 16 20 C -0.13 0.17 5.39 -26.74 -0.14 0.03 16 21 C -0.11 0.14 5.20 -26.73 -0.14 0.00 16 22 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 23 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 24 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 26 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 27 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 28 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.40 -0.57 7.51 -40.82 -0.31 -0.88 16 30 H 0.14 -0.01 7.45 -52.49 -0.39 -0.40 16 31 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 32 H 0.38 -0.94 8.74 45.56 0.40 -0.54 16 33 H -0.26 -0.31 7.11 56.52 0.40 0.10 16 34 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 35 H 0.17 -0.28 6.21 -52.48 -0.33 -0.61 16 36 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.11 0.19 6.23 -51.93 -0.32 -0.14 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 LS Contribution 335.44 15.07 5.05 5.05 Total: 0.00 -7.15 335.44 -9.76 -16.91 By element: Atomic # 1 Polarization: -3.00 SS G_CDS: -6.87 Total: -9.86 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -1.71 Total: 0.17 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -0.66 Total: -1.96 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.38 Total: -4.46 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.20 Total: -5.85 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -7.15 -9.76 -16.91 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_10803934.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.604 kcal (2) G-P(sol) polarization free energy of solvation -7.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds