Wall clock time and date at job start Sun Mar 7 2021 19:44:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09002 * 109.47097 * 2 1 4 4 C 1.53002 * 109.47454 * 120.00120 * 2 1 3 5 5 C 1.53001 * 109.46963 * 180.02562 * 4 2 1 6 6 C 1.53000 * 109.46886 * 299.99499 * 5 4 2 7 7 H 1.09002 * 109.47398 * 300.00496 * 6 5 4 8 8 N 1.46499 * 109.46840 * 180.02562 * 6 5 4 9 9 C 1.34781 * 119.99874 * 85.00543 * 8 6 5 10 10 O 1.21590 * 120.00231 * 359.97438 * 9 8 6 11 11 C 1.47579 * 120.00232 * 179.97438 * 9 8 6 12 12 C 1.40205 * 119.82974 * 359.97438 * 11 9 8 13 13 C 1.36233 * 120.37964 * 179.97438 * 12 11 9 14 14 C 1.39869 * 119.95942 * 0.02562 * 13 12 11 15 15 C 1.46260 * 133.84710 * 180.02562 * 14 13 12 16 16 C 1.50703 * 126.47826 * 359.95822 * 15 14 13 17 17 O 1.42896 * 109.47322 * 74.99932 * 16 15 14 18 18 Si 1.86302 * 109.46681 * 194.99933 * 16 15 14 19 19 C 1.34453 * 107.03670 * 179.97438 * 15 14 13 20 20 N 1.36559 * 109.98781 * 0.02562 * 19 15 14 21 21 C 1.37829 * 109.86070 * 0.02562 * 20 19 15 22 22 C 1.38649 * 133.38064 * 180.35669 * 21 20 19 23 23 C 1.53002 * 109.47233 * 60.00670 * 6 5 4 24 24 C 1.52997 * 109.46978 * 240.00199 * 2 1 3 25 25 H 1.09002 * 109.46838 * 180.02562 * 1 2 3 26 26 H 1.08996 * 109.46698 * 299.99981 * 1 2 3 27 27 H 1.09001 * 109.47142 * 60.00035 * 1 2 3 28 28 H 1.09000 * 109.46497 * 300.00109 * 4 2 1 29 29 H 1.09002 * 109.47067 * 59.99861 * 4 2 1 30 30 H 1.09001 * 109.46652 * 179.97438 * 5 4 2 31 31 H 1.08992 * 109.47514 * 59.99933 * 5 4 2 32 32 H 0.97002 * 120.00410 * 264.99761 * 8 6 5 33 33 H 1.08002 * 119.81078 * 359.97438 * 12 11 9 34 34 H 1.07998 * 120.01969 * 180.02562 * 13 12 11 35 35 H 1.09000 * 109.46962 * 314.99303 * 16 15 14 36 36 H 0.96697 * 113.99919 * 179.97438 * 17 16 15 37 37 H 1.48499 * 110.00049 * 299.99414 * 18 16 15 38 38 H 1.48501 * 110.00121 * 61.32100 * 18 16 15 39 39 H 1.08006 * 125.00675 * 180.02562 * 19 15 14 40 40 H 0.96996 * 125.07099 * 179.97438 * 20 19 15 41 41 H 1.07997 * 120.16384 * 359.90078 * 22 21 20 42 42 H 1.09002 * 109.47075 * 59.99068 * 23 6 5 43 43 H 1.08996 * 109.47407 * 180.02562 * 23 6 5 44 44 H 1.09001 * 109.47375 * 59.99908 * 24 2 1 45 45 H 1.09002 * 109.47497 * 299.99550 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0401 -0.7213 1.2492 5 6 3.5701 -0.7206 1.2494 6 6 4.0805 -1.4416 0.0002 7 1 3.7175 -2.4694 0.0000 8 7 5.5455 -1.4415 0.0007 9 6 6.2192 -2.3979 0.6701 10 8 5.6111 -3.2604 1.2740 11 6 7.6950 -2.3982 0.6702 12 6 8.3927 -1.4023 -0.0277 13 6 9.7550 -1.3916 -0.0347 14 6 10.4648 -2.3786 0.6569 15 6 11.8878 -2.6547 0.8514 16 6 13.0394 -1.8584 0.2938 17 8 13.1778 -0.6415 1.0301 18 14 14.6085 -2.8525 0.4366 19 6 11.9743 -3.7535 1.6214 20 7 10.7236 -4.2033 1.9350 21 6 9.7743 -3.3859 1.3603 22 6 8.3878 -3.3863 1.3662 23 6 3.5705 -0.7204 -1.2491 24 6 2.0400 -0.7212 -1.2493 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3632 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 1.6767 -0.2074 2.1392 29 1 1.6768 -1.7490 1.2492 30 1 3.9335 -1.2341 2.1396 31 1 3.9331 0.3071 1.2496 32 1 6.0307 -0.7533 -0.4808 33 1 7.8470 -0.6392 -0.5629 34 1 10.2865 -0.6214 -0.5739 35 1 12.8487 -1.6291 -0.7546 36 1 13.9018 -0.0776 0.7253 37 1 14.8798 -3.1715 1.8613 38 1 14.4892 -4.1058 -0.3508 39 1 12.8969 -4.2128 1.9444 40 1 10.5319 -4.9824 2.4801 41 1 7.8476 -4.1496 1.9066 42 1 3.9334 0.3075 -1.2488 43 1 3.9337 -1.2342 -2.1391 44 1 1.6766 -0.2074 -2.1392 45 1 1.6767 -1.7489 -1.2493 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_12335838.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:44:05 Heat of formation + Delta-G solvation = -23.851339 kcal Electronic energy + Delta-G solvation = -25707.064790 eV Core-core repulsion = 22076.422276 eV Total energy + Delta-G solvation = -3630.642513 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.47225 -41.03433 -39.37506 -37.78745 -37.44501 -35.63306 -33.34890 -32.36088 -31.76391 -30.75962 -30.36690 -27.03311 -26.40257 -24.51401 -23.76913 -23.57236 -22.16744 -21.32785 -20.75336 -20.53735 -19.20627 -18.37583 -18.24649 -17.54835 -16.94631 -16.25897 -15.94895 -15.72373 -15.40277 -15.29379 -15.20148 -15.17058 -15.05454 -14.76778 -14.73527 -14.49930 -14.19663 -13.83542 -13.58855 -13.25846 -13.19839 -13.13867 -12.68564 -12.56447 -12.49567 -12.09831 -12.07364 -11.91809 -11.89786 -11.66935 -11.31139 -11.10537 -10.77533 -10.74398 -10.23208 -9.98041 -9.33957 -8.81240 -5.04848 -0.24096 0.41199 1.26884 1.33285 1.62614 1.87963 1.93141 2.05809 2.27260 2.96071 3.52269 3.56617 3.66718 3.70413 3.71612 3.78676 3.93636 3.99777 4.06370 4.11739 4.19877 4.24467 4.38646 4.40515 4.45781 4.49998 4.51937 4.56309 4.58407 4.72821 4.75575 4.79095 4.91023 4.98424 4.99864 5.05467 5.15153 5.19161 5.23409 5.27714 5.30871 5.39560 5.44446 5.47374 5.52056 5.60513 5.61275 5.99197 6.35343 6.57140 6.69874 7.31100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.112 4.112 5 C -0.130 4.130 6 C 0.146 3.854 7 H 0.089 0.911 8 N -0.723 5.723 9 C 0.564 3.436 10 O -0.538 6.538 11 C -0.120 4.120 12 C -0.113 4.113 13 C -0.070 4.070 14 C -0.063 4.063 15 C -0.163 4.163 16 C -0.034 4.034 17 O -0.547 6.547 18 Si 0.684 3.316 19 C 0.071 3.929 20 N -0.583 5.583 21 C 0.082 3.918 22 C -0.056 4.056 23 C -0.127 4.127 24 C -0.111 4.111 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.068 0.932 31 H 0.064 0.936 32 H 0.400 0.600 33 H 0.127 0.873 34 H 0.131 0.869 35 H 0.071 0.929 36 H 0.379 0.621 37 H -0.254 1.254 38 H -0.256 1.256 39 H 0.170 0.830 40 H 0.422 0.578 41 H 0.136 0.864 42 H 0.069 0.931 43 H 0.070 0.930 44 H 0.068 0.932 45 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.645 2.840 -3.358 5.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.150 4.150 5 C -0.168 4.168 6 C 0.042 3.958 7 H 0.107 0.893 8 N -0.374 5.374 9 C 0.352 3.648 10 O -0.416 6.416 11 C -0.125 4.125 12 C -0.133 4.133 13 C -0.089 4.089 14 C -0.068 4.068 15 C -0.171 4.171 16 C -0.145 4.145 17 O -0.353 6.353 18 Si 0.585 3.415 19 C -0.057 4.057 20 N -0.185 5.185 21 C -0.024 4.024 22 C -0.077 4.077 23 C -0.165 4.165 24 C -0.149 4.149 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.084 0.916 29 H 0.084 0.916 30 H 0.087 0.913 31 H 0.083 0.917 32 H 0.235 0.765 33 H 0.145 0.855 34 H 0.149 0.851 35 H 0.089 0.911 36 H 0.226 0.774 37 H -0.178 1.178 38 H -0.180 1.180 39 H 0.187 0.813 40 H 0.260 0.740 41 H 0.154 0.846 42 H 0.087 0.913 43 H 0.088 0.912 44 H 0.087 0.913 45 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 3.031 1.086 -2.270 3.940 hybrid contribution -0.300 -0.043 0.070 0.311 sum 2.731 1.043 -2.201 3.659 Atomic orbital electron populations 1.21835 0.95010 1.01984 1.01814 1.21188 0.95699 0.99671 0.94758 0.91095 1.21564 0.94591 1.01092 0.97769 1.21924 0.95958 1.00768 0.98165 1.21032 0.78601 1.01087 0.95125 0.89273 1.45986 1.07333 1.30515 1.53581 1.18141 0.86989 0.81130 0.78558 1.90789 1.69927 1.37455 1.43414 1.19456 0.92452 0.97961 1.02592 1.20689 0.94159 0.98288 1.00152 1.20171 0.93179 0.97263 0.98258 1.19151 0.92034 0.95877 0.99706 1.19617 0.92025 0.98786 1.06657 1.23935 1.03102 0.90972 0.96476 1.86541 1.57022 1.31900 1.59814 0.95100 0.82580 0.81923 0.81885 1.21644 0.88067 0.97122 0.98907 1.41670 1.04214 1.26937 1.45726 1.18082 0.90522 0.93925 0.99861 1.20070 0.89590 0.98955 0.99135 1.21826 0.96696 1.00918 0.97048 1.21556 0.94022 1.01289 0.98025 0.92591 0.92596 0.92606 0.91578 0.91635 0.91346 0.91726 0.76450 0.85533 0.85131 0.91109 0.77360 1.17817 1.18044 0.81333 0.73974 0.84570 0.91258 0.91155 0.91306 0.91538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.10 9.19 37.16 0.34 0.45 16 2 C -0.09 0.06 2.72 -90.62 -0.25 -0.18 16 3 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 4 C -0.11 -0.02 5.20 -26.73 -0.14 -0.16 16 5 C -0.13 -0.12 5.49 -26.73 -0.15 -0.27 16 6 C 0.15 0.11 2.45 -67.93 -0.17 -0.05 16 7 H 0.09 0.25 7.58 -51.93 -0.39 -0.14 16 8 N -0.72 -0.56 5.03 -54.83 -0.28 -0.84 16 9 C 0.56 2.10 7.73 -12.45 -0.10 2.01 16 10 O -0.54 -3.88 15.97 5.29 0.08 -3.80 16 11 C -0.12 -0.34 5.87 -104.95 -0.62 -0.96 16 12 C -0.11 -0.11 9.46 -39.56 -0.37 -0.48 16 13 C -0.07 -0.12 10.03 -39.69 -0.40 -0.52 16 14 C -0.06 -0.21 6.35 -105.04 -0.67 -0.87 16 15 C -0.16 -0.40 5.61 -102.74 -0.58 -0.98 16 16 C -0.03 0.00 3.05 36.01 0.11 0.11 16 17 O -0.55 -0.15 12.86 -35.23 -0.45 -0.61 16 18 Si 0.68 -1.18 30.79 -169.99 -5.23 -6.42 16 19 C 0.07 0.10 10.43 -16.78 -0.18 -0.08 16 20 N -0.58 -0.59 6.07 -10.68 -0.06 -0.65 16 21 C 0.08 0.25 7.26 -84.00 -0.61 -0.36 16 22 C -0.06 -0.18 9.61 -39.03 -0.37 -0.56 16 23 C -0.13 0.15 5.39 -26.70 -0.14 0.01 16 24 C -0.11 0.11 5.21 -26.70 -0.14 -0.03 16 25 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 0.21 8.14 -51.93 -0.42 -0.22 16 31 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.40 -0.70 6.59 -40.82 -0.27 -0.97 16 33 H 0.13 -0.26 6.36 -52.49 -0.33 -0.60 16 34 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 35 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 36 H 0.38 -1.85 8.74 45.56 0.40 -1.45 16 37 H -0.25 -0.23 7.04 56.52 0.40 0.17 16 38 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 39 H 0.17 -0.11 6.30 -52.48 -0.33 -0.44 16 40 H 0.42 -0.82 8.96 -40.82 -0.37 -1.18 16 41 H 0.14 0.41 7.62 -52.49 -0.40 0.01 16 42 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 44 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 45 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 LS Contribution 361.79 15.07 5.45 5.45 Total: 0.00 -8.76 361.79 -11.71 -20.48 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -6.81 Total: -10.68 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -4.42 Total: -2.93 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: -0.34 Total: -1.49 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -0.37 Total: -4.41 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.23 Total: -6.42 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.76 -11.71 -20.48 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12335838.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.373 kcal (2) G-P(sol) polarization free energy of solvation -8.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.478 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds