Wall clock time and date at job start Sun Mar 7 2021 19:44:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09001 * 109.46832 * 2 1 4 4 C 1.53006 * 109.47127 * 119.99679 * 2 1 3 5 5 C 1.52997 * 109.47127 * 179.97438 * 4 2 1 6 6 C 1.53000 * 109.47060 * 300.00449 * 5 4 2 7 7 H 1.09001 * 109.47194 * 299.99650 * 6 5 4 8 8 N 1.46499 * 109.46840 * 180.02562 * 6 5 4 9 9 C 1.34782 * 120.00074 * 155.00031 * 8 6 5 10 10 O 1.21689 * 119.99621 * 359.97438 * 9 8 6 11 11 C 1.46429 * 119.99926 * 180.02562 * 9 8 6 12 12 C 1.34809 * 119.99605 * 180.02562 * 11 9 8 13 13 C 1.47214 * 119.99641 * 179.97438 * 12 11 9 14 14 C 1.39834 * 120.17006 * 359.72512 * 13 12 11 15 15 C 1.37891 * 119.82203 * 179.80974 * 14 13 12 16 16 C 1.38389 * 120.17520 * 0.44155 * 15 14 13 17 17 C 1.50708 * 119.83082 * 179.76735 * 16 15 14 18 18 O 1.42900 * 109.47049 * 120.02106 * 17 16 15 19 19 Si 1.86292 * 109.47009 * 0.02562 * 17 16 15 20 20 C 1.38406 * 120.34679 * 359.78483 * 16 15 14 21 21 C 1.37899 * 120.16686 * 0.02562 * 20 16 15 22 22 C 1.52996 * 109.47328 * 60.00126 * 6 5 4 23 23 C 1.52997 * 109.47232 * 239.99801 * 2 1 3 24 24 H 1.09001 * 109.47289 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47261 * 300.00019 * 1 2 3 26 26 H 1.09002 * 109.47153 * 60.00191 * 1 2 3 27 27 H 1.08998 * 109.46505 * 59.99871 * 4 2 1 28 28 H 1.08996 * 109.46884 * 300.00752 * 4 2 1 29 29 H 1.09002 * 109.47153 * 180.02562 * 5 4 2 30 30 H 1.09001 * 109.46832 * 60.00321 * 5 4 2 31 31 H 0.97002 * 120.00427 * 334.99530 * 8 6 5 32 32 H 1.08000 * 120.00413 * 359.97438 * 11 9 8 33 33 H 1.08000 * 120.00496 * 359.97438 * 12 11 9 34 34 H 1.07998 * 120.08755 * 359.97438 * 14 13 12 35 35 H 1.08008 * 119.91078 * 180.20887 * 15 14 13 36 36 H 1.09000 * 109.46876 * 240.01831 * 17 16 15 37 37 H 0.96692 * 114.00299 * 299.99746 * 18 17 16 38 38 H 1.48498 * 110.00113 * 180.02562 * 19 17 16 39 39 H 1.48507 * 110.00164 * 301.32276 * 19 17 16 40 40 H 1.07996 * 119.91767 * 179.97438 * 20 16 15 41 41 H 1.07994 * 120.08420 * 179.97438 * 21 20 16 42 42 H 1.08992 * 109.47554 * 59.99639 * 22 6 5 43 43 H 1.09004 * 109.47108 * 179.97438 * 22 6 5 44 44 H 1.09002 * 109.47045 * 59.99942 * 23 2 1 45 45 H 1.09001 * 109.47375 * 299.99867 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 3.5700 -0.7218 1.2490 6 6 4.0794 -1.4434 -0.0003 7 1 3.7158 -2.4709 0.0000 8 7 5.5444 -1.4444 -0.0002 9 6 6.2177 -2.4010 -0.6697 10 8 5.6086 -3.2641 -1.2738 11 6 7.6820 -2.4023 -0.6692 12 6 8.3553 -3.3589 -1.3393 13 6 9.8275 -3.3599 -1.3392 14 6 10.5309 -2.3671 -0.6500 15 6 11.9097 -2.3772 -0.6515 16 6 12.5974 -3.3611 -1.3401 17 6 14.1045 -3.3617 -1.3408 18 8 14.5806 -4.5830 -0.7717 19 14 14.7265 -1.9233 -0.3335 20 6 11.9084 -4.3444 -2.0285 21 6 10.5294 -4.3502 -2.0333 22 6 3.5695 -0.7221 -1.2495 23 6 2.0400 -0.7213 -1.2492 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 1.6766 -1.7488 1.2493 28 1 1.6765 -0.2074 2.1392 29 1 3.9333 -1.2360 2.1388 30 1 3.9336 0.3058 1.2488 31 1 6.0300 -0.7566 0.4816 32 1 8.2225 -1.6366 -0.1327 33 1 7.8148 -4.1244 -1.8761 34 1 9.9956 -1.5961 -0.1159 35 1 12.4545 -1.6130 -0.1169 36 1 14.4674 -3.2722 -2.3648 37 1 14.2958 -4.7291 0.1406 38 1 16.2114 -1.9122 -0.3268 39 1 14.2121 -0.6489 -0.8962 40 1 12.4521 -5.1087 -2.5639 41 1 9.9932 -5.1179 -2.5713 42 1 3.9331 0.3054 -1.2497 43 1 3.9328 -1.2360 -2.1395 44 1 1.6766 -0.2075 -2.1392 45 1 1.6767 -1.7490 -1.2492 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_12360594.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:44:31 Heat of formation + Delta-G solvation = -47.032384 kcal Electronic energy + Delta-G solvation = -23411.604826 eV Core-core repulsion = 19973.609158 eV Total energy + Delta-G solvation = -3437.995667 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.167 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.09839 -40.62114 -39.29199 -37.82084 -35.66275 -35.03870 -32.45210 -32.13874 -31.80100 -31.09993 -27.63581 -26.52563 -24.25278 -23.88717 -23.72744 -22.35748 -21.66717 -21.02069 -20.22602 -18.84429 -18.07240 -17.55917 -16.88168 -16.57023 -16.26260 -16.10366 -15.78469 -15.43769 -15.26703 -15.21614 -15.12269 -14.83195 -14.64118 -14.24199 -14.17311 -13.86131 -13.65720 -13.31271 -13.23683 -13.18767 -13.01510 -12.58680 -12.28637 -12.13059 -12.05559 -11.95684 -11.77034 -11.69554 -11.38109 -11.31864 -11.13483 -10.80251 -10.49681 -10.06732 -10.00615 -9.28609 -5.10389 -0.57427 0.30988 0.89812 1.22391 1.56451 1.91338 2.20221 2.31958 2.76971 3.37053 3.50010 3.58822 3.64205 3.68277 3.74191 3.81889 3.88871 4.04637 4.10935 4.15792 4.18992 4.25619 4.37272 4.37708 4.44012 4.47184 4.48867 4.53163 4.71679 4.75544 4.77011 4.88444 4.89508 4.95842 5.00660 5.03622 5.08892 5.12677 5.16050 5.22346 5.28478 5.32091 5.37505 5.41108 5.48933 5.55351 5.58073 5.81733 6.50015 6.55326 7.29568 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.070 0.930 4 C -0.111 4.111 5 C -0.126 4.126 6 C 0.145 3.855 7 H 0.089 0.911 8 N -0.724 5.724 9 C 0.548 3.452 10 O -0.543 6.543 11 C -0.214 4.214 12 C -0.017 4.017 13 C -0.072 4.072 14 C -0.096 4.096 15 C -0.120 4.120 16 C -0.108 4.108 17 C -0.071 4.071 18 O -0.539 6.539 19 Si 0.689 3.311 20 C -0.095 4.095 21 C -0.092 4.092 22 C -0.129 4.129 23 C -0.112 4.112 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.066 0.934 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.068 0.932 31 H 0.400 0.600 32 H 0.130 0.870 33 H 0.137 0.863 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.115 0.885 37 H 0.380 0.620 38 H -0.254 1.254 39 H -0.258 1.258 40 H 0.131 0.869 41 H 0.132 0.868 42 H 0.063 0.937 43 H 0.067 0.933 44 H 0.065 0.935 45 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.141 3.016 4.151 5.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.041 3.959 7 H 0.107 0.893 8 N -0.374 5.374 9 C 0.337 3.663 10 O -0.422 6.422 11 C -0.234 4.234 12 C -0.036 4.036 13 C -0.072 4.072 14 C -0.114 4.114 15 C -0.137 4.137 16 C -0.109 4.109 17 C -0.182 4.182 18 O -0.344 6.344 19 Si 0.591 3.409 20 C -0.113 4.113 21 C -0.110 4.110 22 C -0.168 4.168 23 C -0.150 4.150 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.087 0.913 31 H 0.235 0.765 32 H 0.148 0.852 33 H 0.155 0.845 34 H 0.149 0.851 35 H 0.147 0.853 36 H 0.133 0.867 37 H 0.227 0.773 38 H -0.179 1.179 39 H -0.183 1.183 40 H 0.149 0.851 41 H 0.149 0.851 42 H 0.082 0.918 43 H 0.086 0.914 44 H 0.084 0.916 45 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 0.155 3.091 3.141 4.410 hybrid contribution 0.052 0.206 -0.366 0.423 sum 0.207 3.297 2.775 4.315 Atomic orbital electron populations 1.21836 0.94987 1.02008 1.01825 1.21184 0.95725 0.99639 0.94751 0.91132 1.21549 0.94055 1.01301 0.98027 1.21810 0.96698 1.00872 0.97059 1.21017 0.78827 1.01026 0.95059 0.89327 1.45980 1.07370 1.30527 1.53522 1.18338 0.88042 0.81197 0.78744 1.90831 1.70341 1.37487 1.43513 1.22917 0.93192 1.02220 1.05111 1.22409 0.91746 0.96224 0.93270 1.19072 0.92517 0.96382 0.99274 1.21355 0.93840 0.97867 0.98306 1.20952 0.94467 0.98504 0.99777 1.20526 0.96212 0.95986 0.98137 1.25105 0.91854 0.97209 1.04019 1.86512 1.75577 1.39511 1.32833 0.94715 0.80708 0.76020 0.89424 1.20995 0.93738 0.98172 0.98358 1.21470 0.94210 0.97656 0.97703 1.21907 0.95991 1.00684 0.98181 1.21555 0.94600 1.01115 0.97775 0.92569 0.92605 0.92583 0.91535 0.91311 0.91194 0.91319 0.76546 0.85228 0.84477 0.85066 0.85283 0.86745 0.77293 1.17907 1.18274 0.85145 0.85054 0.91815 0.91381 0.91579 0.91623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 9.19 37.16 0.34 0.49 16 2 C -0.09 0.09 2.72 -90.62 -0.25 -0.15 16 3 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 4 C -0.11 0.15 5.20 -26.73 -0.14 0.01 16 5 C -0.13 0.21 5.39 -26.73 -0.14 0.07 16 6 C 0.14 0.02 2.45 -67.93 -0.17 -0.15 16 7 H 0.09 0.21 7.57 -51.93 -0.39 -0.19 16 8 N -0.72 0.28 5.07 -55.20 -0.28 0.00 16 9 C 0.55 1.18 7.71 -12.96 -0.10 1.08 16 10 O -0.54 -3.37 15.89 5.20 0.08 -3.28 16 11 C -0.21 0.04 9.41 -37.50 -0.35 -0.32 16 12 C -0.02 -0.01 9.46 -37.15 -0.35 -0.36 16 13 C -0.07 0.00 5.87 -105.06 -0.62 -0.62 16 14 C -0.10 0.10 9.41 -39.11 -0.37 -0.27 16 15 C -0.12 0.13 8.65 -39.65 -0.34 -0.21 16 16 C -0.11 0.04 5.40 -104.50 -0.56 -0.52 16 17 C -0.07 0.05 2.82 36.01 0.10 0.15 16 18 O -0.54 0.08 12.76 -35.23 -0.45 -0.37 16 19 Si 0.69 -1.06 29.77 -169.99 -5.06 -6.12 16 20 C -0.09 -0.01 9.59 -39.64 -0.38 -0.39 16 21 C -0.09 0.00 9.80 -39.11 -0.38 -0.38 16 22 C -0.13 -0.05 5.49 -26.76 -0.15 -0.20 16 23 C -0.11 0.02 5.20 -26.76 -0.14 -0.12 16 24 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 31 H 0.40 -1.28 8.58 -40.82 -0.35 -1.63 16 32 H 0.13 -0.39 6.07 -52.49 -0.32 -0.71 16 33 H 0.14 0.16 7.52 -52.49 -0.39 -0.23 16 34 H 0.13 -0.42 6.17 -52.49 -0.32 -0.74 16 35 H 0.13 -0.38 4.86 -52.48 -0.25 -0.64 16 36 H 0.12 -0.02 7.96 -51.93 -0.41 -0.44 16 37 H 0.38 -1.51 8.70 45.56 0.40 -1.12 16 38 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 39 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 40 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 41 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 43 H 0.07 0.17 8.14 -51.93 -0.42 -0.26 16 44 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 45 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 362.73 15.07 5.47 5.47 Total: 0.00 -7.00 362.73 -11.41 -18.41 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -7.17 Total: -12.20 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -4.00 Total: -1.90 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.28 Total: 0.00 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.37 Total: -3.65 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.06 Total: -6.12 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -7.00 -11.41 -18.41 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12360594.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.621 kcal (2) G-P(sol) polarization free energy of solvation -7.001 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.032 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds