Wall clock time and date at job start Sun Mar 7 2021 19:44:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 H 1.09002 * 109.47103 * 2 1 4 4 C 1.52997 * 109.47482 * 120.00247 * 2 1 3 5 5 C 1.53000 * 109.47060 * 180.02562 * 4 2 1 6 6 C 1.53002 * 109.47233 * 299.99657 * 5 4 2 7 7 H 1.09002 * 109.47075 * 300.00932 * 6 5 4 8 8 N 1.46492 * 109.47204 * 180.02562 * 6 5 4 9 9 C 1.34780 * 119.99930 * 155.00105 * 8 6 5 10 10 O 1.21569 * 119.99853 * 0.02562 * 9 8 6 11 11 C 1.47704 * 120.00072 * 179.97438 * 9 8 6 12 12 C 1.39801 * 120.15452 * 180.02562 * 11 9 8 13 13 F 1.35104 * 120.08352 * 0.02702 * 12 11 9 14 14 C 1.38309 * 119.83349 * 180.02562 * 12 11 9 15 15 C 1.38190 * 120.14275 * 359.97438 * 14 12 11 16 16 C 1.50695 * 119.84216 * 179.97438 * 15 14 12 17 17 O 1.42902 * 109.47251 * 14.99631 * 16 15 14 18 18 Si 1.86297 * 109.47234 * 134.99565 * 16 15 14 19 19 C 1.38656 * 120.31150 * 0.02562 * 15 14 12 20 20 F 1.35099 * 119.91291 * 179.97438 * 19 15 14 21 21 C 1.38064 * 120.16721 * 359.72472 * 19 15 14 22 22 C 1.52997 * 109.46817 * 60.00194 * 6 5 4 23 23 C 1.52999 * 109.46961 * 240.00608 * 2 1 3 24 24 H 1.09001 * 109.47066 * 299.99922 * 1 2 3 25 25 H 1.08996 * 109.47747 * 59.99588 * 1 2 3 26 26 H 1.09002 * 109.47103 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.47153 * 59.99783 * 4 2 1 28 28 H 1.09001 * 109.46832 * 299.99974 * 4 2 1 29 29 H 1.08992 * 109.47399 * 59.99823 * 5 4 2 30 30 H 1.09004 * 109.46724 * 180.02562 * 5 4 2 31 31 H 0.96998 * 120.00353 * 335.00390 * 8 6 5 32 32 H 1.07997 * 119.92883 * 179.97438 * 14 12 11 33 33 H 1.09000 * 109.47097 * 254.99676 * 16 15 14 34 34 H 0.96693 * 114.00132 * 59.99840 * 17 16 15 35 35 H 1.48501 * 110.00360 * 58.67957 * 18 16 15 36 36 H 1.48500 * 110.00127 * 180.02562 * 18 16 15 37 37 H 1.08005 * 120.07333 * 180.29750 * 21 19 15 38 38 H 1.09002 * 109.47153 * 60.00231 * 22 6 5 39 39 H 1.09001 * 109.47289 * 180.02562 * 22 6 5 40 40 H 1.09000 * 109.47486 * 59.99547 * 23 2 1 41 41 H 1.09002 * 109.46716 * 299.99630 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7213 1.2492 5 6 3.5700 -0.7207 1.2494 6 6 4.0805 -1.4415 0.0001 7 1 3.7175 -2.4693 -0.0002 8 7 5.5454 -1.4415 0.0006 9 6 6.2196 -2.3974 -0.6689 10 8 5.6120 -3.2594 -1.2736 11 6 7.6966 -2.3970 -0.6689 12 6 8.3992 -3.3867 -1.3627 13 9 7.7288 -4.3469 -2.0364 14 6 9.7822 -3.3804 -1.3578 15 6 10.4692 -2.3985 -0.6696 16 6 11.9761 -2.3983 -0.6683 17 8 12.4535 -3.2643 -1.6999 18 14 12.5973 -0.6685 -0.9727 19 6 9.7784 -1.4140 0.0206 20 9 10.4582 -0.4583 0.6911 21 6 8.3978 -1.4051 0.0200 22 6 3.5704 -0.7203 -1.2490 23 6 2.0399 -0.7211 -1.2493 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 1.6767 -1.7490 1.2492 28 1 1.6767 -0.2074 2.1392 29 1 3.9329 0.3071 1.2496 30 1 3.9334 -1.2349 2.1391 31 1 6.0303 -0.7535 0.4829 32 1 10.3265 -4.1444 -1.8929 33 1 12.3387 -2.7498 0.2977 34 1 12.1689 -3.0113 -2.5887 35 1 12.0817 0.2482 0.0756 36 1 14.0822 -0.6550 -0.9744 37 1 7.8613 -0.6348 0.5541 38 1 3.9334 0.3075 -1.2488 39 1 3.9337 -1.2340 -2.1391 40 1 1.6765 -0.2073 -2.1393 41 1 1.6765 -1.7488 -1.2493 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:44:33 Heat of formation + Delta-G solvation = -130.445052 kcal Electronic energy + Delta-G solvation = -26160.837793 eV Core-core repulsion = 22064.080889 eV Total energy + Delta-G solvation = -4096.756904 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.132 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -50.44093 -50.09535 -41.52273 -40.23561 -39.24646 -37.65804 -35.85465 -33.44459 -31.83018 -31.76000 -31.40900 -28.16443 -26.68650 -24.21244 -23.94275 -23.69045 -22.31139 -21.71178 -20.85031 -19.56670 -19.08060 -18.56451 -17.88824 -17.53489 -17.28346 -16.98428 -16.74216 -16.16640 -16.03220 -15.85462 -15.74429 -15.55410 -15.21207 -15.20707 -15.06834 -14.54397 -14.23192 -14.18409 -13.71024 -13.69678 -13.26726 -13.22256 -13.14587 -12.97257 -12.55870 -12.49506 -12.10607 -11.94152 -11.75372 -11.51435 -11.31199 -11.17079 -11.02538 -10.99263 -10.28297 -10.15395 -9.71863 -4.99650 -0.78008 -0.28054 1.14474 1.47867 1.65569 1.85914 1.98767 2.29070 2.80051 2.84133 3.13572 3.19910 3.49957 3.52513 3.66216 3.72119 3.80852 3.91955 4.07677 4.17411 4.21028 4.32724 4.38034 4.40536 4.43443 4.52585 4.56171 4.64041 4.74093 4.76490 4.78544 4.79880 4.95767 4.98998 5.08687 5.12891 5.18360 5.21715 5.32208 5.39802 5.40851 5.43037 5.56134 6.33024 6.63482 7.00895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.091 4.091 3 H 0.079 0.921 4 C -0.111 4.111 5 C -0.119 4.119 6 C 0.146 3.854 7 H 0.065 0.935 8 N -0.704 5.704 9 C 0.557 3.443 10 O -0.564 6.564 11 C -0.158 4.158 12 C 0.138 3.862 13 F -0.128 7.128 14 C -0.116 4.116 15 C -0.083 4.083 16 C -0.072 4.072 17 O -0.547 6.547 18 Si 0.764 3.236 19 C 0.072 3.928 20 F -0.121 7.121 21 C -0.069 4.069 22 C -0.124 4.124 23 C -0.111 4.111 24 H 0.060 0.940 25 H 0.054 0.946 26 H 0.050 0.950 27 H 0.057 0.943 28 H 0.079 0.921 29 H 0.088 0.912 30 H 0.075 0.925 31 H 0.415 0.585 32 H 0.175 0.825 33 H 0.128 0.872 34 H 0.400 0.600 35 H -0.253 1.253 36 H -0.303 1.303 37 H 0.181 0.819 38 H 0.079 0.921 39 H 0.044 0.956 40 H 0.067 0.933 41 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.112 5.960 1.236 6.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.109 4.109 3 H 0.097 0.903 4 C -0.149 4.149 5 C -0.157 4.157 6 C 0.042 3.958 7 H 0.083 0.917 8 N -0.356 5.356 9 C 0.344 3.656 10 O -0.444 6.444 11 C -0.163 4.163 12 C 0.118 3.882 13 F -0.106 7.106 14 C -0.134 4.134 15 C -0.085 4.085 16 C -0.181 4.181 17 O -0.356 6.356 18 Si 0.667 3.333 19 C 0.053 3.947 20 F -0.099 7.099 21 C -0.088 4.088 22 C -0.163 4.163 23 C -0.149 4.149 24 H 0.079 0.921 25 H 0.074 0.926 26 H 0.069 0.931 27 H 0.076 0.924 28 H 0.098 0.902 29 H 0.106 0.894 30 H 0.094 0.906 31 H 0.254 0.746 32 H 0.192 0.808 33 H 0.145 0.855 34 H 0.251 0.749 35 H -0.178 1.178 36 H -0.231 1.231 37 H 0.198 0.802 38 H 0.097 0.903 39 H 0.063 0.937 40 H 0.086 0.914 41 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 0.371 5.720 1.632 5.959 hybrid contribution 0.011 -0.613 0.449 0.760 sum 0.382 5.107 2.080 5.528 Atomic orbital electron populations 1.21837 0.95084 1.01738 1.02066 1.21159 0.95639 0.99874 0.94230 0.90265 1.21555 0.94177 1.00919 0.98294 1.21781 0.96464 1.01636 0.95818 1.21053 0.78113 1.00210 0.96429 0.91707 1.45869 1.07647 1.29795 1.52332 1.18141 0.86787 0.81634 0.79055 1.90863 1.70231 1.38711 1.44554 1.19811 0.93391 0.98613 1.04453 1.17971 0.90423 0.86739 0.93083 1.91594 1.80792 1.61059 1.77175 1.20881 0.90502 1.00330 1.01724 1.20476 0.97972 0.93555 0.96505 1.25192 0.89653 1.07988 0.95273 1.86500 1.75687 1.54191 1.19179 0.94254 0.77416 0.73804 0.87813 1.17290 0.90022 0.89348 0.98064 1.91603 1.78557 1.61412 1.78371 1.21282 0.92074 0.97991 0.97452 1.21868 0.96354 1.01059 0.96988 1.21559 0.94176 1.00650 0.98558 0.92072 0.92641 0.93135 0.92446 0.90243 0.89374 0.90587 0.74633 0.80782 0.85495 0.74887 1.17785 1.23120 0.80214 0.90254 0.93747 0.91416 0.92830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.40 9.19 71.98 0.66 1.06 16 2 C -0.09 0.29 2.72 -10.80 -0.03 0.26 16 3 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 4 C -0.11 0.45 5.20 30.59 0.16 0.61 16 5 C -0.12 0.64 5.39 30.60 0.16 0.81 16 6 C 0.15 -0.06 2.45 44.99 0.11 0.05 16 7 H 0.06 0.35 7.58 -2.39 -0.02 0.34 16 8 N -0.70 1.23 5.03 -445.55 -2.24 -1.01 16 9 C 0.56 2.98 7.73 86.74 0.67 3.66 16 10 O -0.56 -8.44 15.00 -3.93 -0.06 -8.50 16 11 C -0.16 -0.21 5.88 -20.06 -0.12 -0.33 16 12 C 0.14 0.48 7.28 22.66 0.17 0.64 16 13 F -0.13 -1.30 15.55 44.97 0.70 -0.60 16 14 C -0.12 0.23 9.20 22.28 0.20 0.44 16 15 C -0.08 0.29 5.14 -19.78 -0.10 0.19 16 16 C -0.07 0.30 2.96 71.23 0.21 0.51 16 17 O -0.55 2.26 11.63 -148.98 -1.73 0.53 16 18 Si 0.76 -3.18 30.81 68.60 2.11 -1.07 16 19 C 0.07 -0.24 6.65 22.33 0.15 -0.10 16 20 F -0.12 0.19 12.81 44.97 0.58 0.76 16 21 C -0.07 0.33 9.51 22.57 0.21 0.54 16 22 C -0.12 -0.02 5.50 30.61 0.17 0.15 16 23 C -0.11 0.06 5.21 30.61 0.16 0.22 16 24 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 25 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 26 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 27 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 28 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 29 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 30 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 31 H 0.42 -3.68 6.63 -92.71 -0.62 -4.30 16 32 H 0.17 -0.82 7.06 -2.91 -0.02 -0.84 16 33 H 0.13 -0.43 7.96 -2.39 -0.02 -0.45 16 34 H 0.40 -4.98 8.42 -74.06 -0.62 -5.61 16 35 H -0.25 -0.02 5.27 99.48 0.52 0.51 16 36 H -0.30 -1.15 7.11 99.48 0.71 -0.44 16 37 H 0.18 -2.08 6.41 -2.91 -0.02 -2.10 16 38 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.04 0.24 8.14 -2.39 -0.02 0.22 16 40 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 41 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 Total: 0.00 -18.54 334.98 1.83 -16.72 By element: Atomic # 1 Polarization: -15.24 SS G_CDS: -0.32 Total: -15.56 kcal Atomic # 6 Polarization: 5.93 SS G_CDS: 2.79 Total: 8.72 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -2.24 Total: -1.01 kcal Atomic # 8 Polarization: -6.18 SS G_CDS: -1.79 Total: -7.97 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 1.27 Total: 0.17 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.11 Total: -1.07 kcal Total: -18.54 1.83 -16.72 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.729 kcal (2) G-P(sol) polarization free energy of solvation -18.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.274 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.716 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds