Wall clock time and date at job start Sun Mar 7 2021 19:44:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09005 * 109.47015 * 2 1 4 4 C 1.52998 * 109.47441 * 119.99350 * 2 1 3 5 5 C 1.53000 * 109.47741 * 180.02562 * 4 2 1 6 6 C 1.53006 * 109.46940 * 300.00509 * 5 4 2 7 7 H 1.08994 * 109.46712 * 299.99751 * 6 5 4 8 8 N 1.46497 * 109.46727 * 179.97438 * 6 5 4 9 9 C 1.34776 * 119.99808 * 85.00448 * 8 6 5 10 10 O 1.21280 * 120.00296 * 359.97438 * 9 8 6 11 11 C 1.50705 * 119.99667 * 179.97438 * 9 8 6 12 12 N 1.46504 * 109.46764 * 179.97438 * 11 9 8 13 13 C 1.35036 * 125.92695 * 124.97693 * 12 11 9 14 14 C 1.35087 * 107.97460 * 179.74752 * 13 12 11 15 15 C 1.50708 * 126.07627 * 180.23693 * 14 13 12 16 16 O 1.42897 * 109.47047 * 104.01258 * 15 14 13 17 17 Si 1.86305 * 109.46917 * 344.01726 * 15 14 13 18 18 C 1.40839 * 107.85391 * 0.39258 * 14 13 12 19 19 C 1.48420 * 126.04179 * 179.86066 * 18 14 13 20 20 C 1.39329 * 120.11749 * 43.40563 * 19 18 14 21 21 C 1.38017 * 119.87776 * 180.29691 * 20 19 18 22 22 C 1.38317 * 120.12079 * 359.42064 * 21 20 19 23 23 C 1.38324 * 120.24152 * 0.60379 * 22 21 20 24 24 C 1.38022 * 120.11517 * 359.67415 * 23 22 21 25 25 N 1.31624 * 107.91920 * 359.60415 * 18 14 13 26 26 C 1.52996 * 109.46867 * 59.99512 * 6 5 4 27 27 C 1.52997 * 109.47419 * 239.99728 * 2 1 3 28 28 H 1.09000 * 109.46507 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47247 * 300.00338 * 1 2 3 30 30 H 1.08997 * 109.46922 * 60.00981 * 1 2 3 31 31 H 1.09003 * 109.46916 * 300.00814 * 4 2 1 32 32 H 1.09004 * 109.46941 * 60.00057 * 4 2 1 33 33 H 1.08989 * 109.47333 * 180.02562 * 5 4 2 34 34 H 1.09000 * 109.46551 * 59.99919 * 5 4 2 35 35 H 0.97001 * 120.00009 * 264.99364 * 8 6 5 36 36 H 1.09000 * 109.47238 * 59.99811 * 11 9 8 37 37 H 1.08999 * 109.47163 * 299.99330 * 11 9 8 38 38 H 1.07995 * 126.01484 * 359.97438 * 13 12 11 39 39 H 1.08994 * 109.47486 * 224.01525 * 15 14 13 40 40 H 0.96705 * 113.99870 * 180.02562 * 16 15 14 41 41 H 1.48502 * 109.99945 * 298.68065 * 17 15 14 42 42 H 1.48505 * 110.00126 * 59.99501 * 17 15 14 43 43 H 1.08004 * 120.05654 * 0.02562 * 20 19 18 44 44 H 1.08001 * 119.93782 * 179.71995 * 21 20 19 45 45 H 1.07998 * 119.88018 * 180.27496 * 22 21 20 46 46 H 1.07997 * 119.94080 * 179.70185 * 23 22 21 47 47 H 1.08005 * 120.05595 * 180.02562 * 24 23 22 48 48 H 1.09004 * 109.47395 * 60.00455 * 26 6 5 49 49 H 1.09011 * 109.46739 * 179.97438 * 26 6 5 50 50 H 1.08995 * 109.47018 * 60.00130 * 27 2 1 51 51 H 1.08991 * 109.47048 * 299.99585 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0401 -0.7211 1.2493 5 6 3.5701 -0.7206 1.2497 6 6 4.0806 -1.4415 0.0004 7 1 3.7176 -2.4692 0.0003 8 7 5.5456 -1.4405 0.0005 9 6 6.2201 -2.3961 0.6700 10 8 5.6142 -3.2567 1.2728 11 6 7.7271 -2.3954 0.6696 12 7 8.2162 -3.5261 1.4625 13 6 9.0716 -4.4806 1.0376 14 6 9.2799 -5.3387 2.0599 15 6 10.1710 -6.5538 2.0310 16 8 11.3808 -6.2742 2.7382 17 14 10.5709 -6.9888 0.2641 18 6 8.5137 -4.8982 3.1564 19 6 8.4411 -5.5485 4.4886 20 6 9.6018 -6.0115 5.1047 21 6 9.5279 -6.6210 6.3408 22 6 8.3059 -6.7617 6.9733 23 6 7.1503 -6.3043 6.3660 24 6 7.2121 -5.6984 5.1274 25 7 7.8777 -3.8047 2.7928 26 6 3.5705 -0.7203 -1.2488 27 6 2.0401 -0.7213 -1.2492 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 1.6766 -0.2072 2.1392 32 1 1.6767 -1.7488 1.2494 33 1 3.9333 -1.2346 2.1394 34 1 3.9329 0.3073 1.2498 35 1 6.0301 -0.7520 -0.4814 36 1 8.0901 -1.4637 1.1037 37 1 8.0902 -2.4850 -0.3542 38 1 9.5145 -4.5445 0.0547 39 1 9.6587 -7.3914 2.5044 40 1 12.0035 -7.0138 2.7600 41 1 9.3237 -7.3127 -0.4740 42 1 11.2696 -5.8548 -0.3925 43 1 10.5571 -5.8977 4.6138 44 1 10.4264 -6.9844 6.8172 45 1 8.2530 -7.2353 7.9425 46 1 6.1982 -6.4210 6.8621 47 1 6.3093 -5.3412 4.6543 48 1 3.9335 0.3075 -1.2487 49 1 3.9347 -1.2337 -2.1388 50 1 1.6768 -0.2075 -2.1391 51 1 1.6768 -1.7489 -1.2491 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_12622748.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:44:43 Heat of formation + Delta-G solvation = 29.220127 kcal Electronic energy + Delta-G solvation = -31560.871442 eV Core-core repulsion = 27427.802990 eV Total energy + Delta-G solvation = -4133.068451 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.189 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.42227 -41.07162 -39.66807 -39.27271 -37.63101 -35.75084 -34.76845 -32.58710 -32.12683 -31.85631 -31.61099 -31.26570 -28.87241 -26.84979 -25.70909 -24.04925 -23.83227 -23.26727 -22.42367 -21.67816 -21.48721 -20.94940 -20.54082 -18.48514 -18.41434 -18.23376 -17.56908 -16.95833 -16.77169 -16.18149 -15.84106 -15.75063 -15.63284 -15.36170 -15.30157 -15.22762 -15.03287 -14.78703 -14.55634 -14.36943 -14.19499 -13.92742 -13.85467 -13.67971 -13.54544 -13.33943 -13.28996 -13.21387 -12.65292 -12.59322 -12.19257 -12.11340 -12.02636 -11.95661 -11.78157 -11.76102 -11.54788 -11.39760 -11.20792 -11.03354 -10.49683 -10.15240 -10.14124 -9.66382 -9.61922 -9.19438 -4.99175 0.30682 0.70376 0.84316 1.20400 1.34854 1.46156 1.63975 1.84986 1.98396 2.03205 3.06559 3.27838 3.44922 3.58289 3.59584 3.61104 3.65118 3.79435 3.83090 3.85986 3.98592 4.10208 4.14637 4.23407 4.27764 4.30477 4.37253 4.40711 4.42106 4.46940 4.49254 4.66422 4.67096 4.69508 4.78091 4.84133 4.89718 4.90542 4.92781 4.95063 5.05816 5.10007 5.17016 5.17681 5.23316 5.30946 5.36722 5.39147 5.45792 5.47069 5.78879 5.80112 5.81816 5.86832 6.24885 6.31989 6.69976 6.74366 7.07624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.094 4.094 3 H 0.071 0.929 4 C -0.112 4.112 5 C -0.129 4.129 6 C 0.148 3.852 7 H 0.088 0.912 8 N -0.727 5.727 9 C 0.499 3.501 10 O -0.503 6.503 11 C 0.115 3.885 12 N -0.357 5.357 13 C 0.059 3.941 14 C -0.203 4.203 15 C -0.029 4.029 16 O -0.546 6.546 17 Si 0.683 3.317 18 C 0.134 3.866 19 C -0.020 4.020 20 C -0.093 4.093 21 C -0.126 4.126 22 C -0.112 4.112 23 C -0.126 4.126 24 C -0.090 4.090 25 N -0.246 5.246 26 C -0.126 4.126 27 C -0.111 4.111 28 H 0.055 0.945 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.066 0.934 32 H 0.065 0.935 33 H 0.068 0.932 34 H 0.064 0.936 35 H 0.401 0.599 36 H 0.119 0.881 37 H 0.126 0.874 38 H 0.172 0.828 39 H 0.072 0.928 40 H 0.379 0.621 41 H -0.257 1.257 42 H -0.254 1.254 43 H 0.148 0.852 44 H 0.126 0.874 45 H 0.123 0.877 46 H 0.124 0.876 47 H 0.124 0.876 48 H 0.069 0.931 49 H 0.069 0.931 50 H 0.069 0.931 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.331 0.464 -4.241 4.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.150 4.150 5 C -0.168 4.168 6 C 0.044 3.956 7 H 0.106 0.894 8 N -0.380 5.380 9 C 0.283 3.717 10 O -0.376 6.376 11 C -0.010 4.010 12 N -0.139 5.139 13 C -0.086 4.086 14 C -0.215 4.215 15 C -0.140 4.140 16 O -0.352 6.352 17 Si 0.585 3.415 18 C -0.032 4.032 19 C -0.022 4.022 20 C -0.112 4.112 21 C -0.144 4.144 22 C -0.130 4.130 23 C -0.144 4.144 24 C -0.110 4.110 25 N -0.066 5.066 26 C -0.164 4.164 27 C -0.149 4.149 28 H 0.074 0.926 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.235 0.765 36 H 0.137 0.863 37 H 0.144 0.856 38 H 0.189 0.811 39 H 0.090 0.910 40 H 0.227 0.773 41 H -0.182 1.182 42 H -0.179 1.179 43 H 0.165 0.835 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.142 0.858 47 H 0.142 0.858 48 H 0.088 0.912 49 H 0.088 0.912 50 H 0.088 0.912 51 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.607 1.676 -4.354 4.704 hybrid contribution 0.347 0.167 -0.292 0.483 sum 0.953 1.842 -4.646 5.088 Atomic orbital electron populations 1.21835 0.94928 1.02028 1.01879 1.21185 0.95792 0.99636 0.94674 0.91086 1.21563 0.94503 1.01127 0.97843 1.21914 0.96081 1.00691 0.98080 1.21033 0.78242 1.01086 0.95273 0.89390 1.46013 1.07618 1.30514 1.53817 1.20504 0.89428 0.82144 0.79645 1.90821 1.69291 1.36498 1.41007 1.21534 0.93167 0.89483 0.96851 1.47804 1.35490 1.20873 1.09714 1.22141 0.95932 0.90498 1.00035 1.19376 1.06923 1.01251 0.93906 1.23871 0.86406 0.95659 1.08102 1.86466 1.28581 1.42948 1.77246 0.95242 0.84515 0.86827 0.74958 1.20654 0.95247 0.93427 0.93858 1.17768 0.94075 0.99790 0.90588 1.21646 0.98720 0.96055 0.94784 1.21118 0.97892 1.00030 0.95320 1.21291 0.92736 0.99175 0.99825 1.21089 0.98706 0.99298 0.95296 1.21254 0.97090 0.97714 0.94895 1.77807 1.20992 1.16614 0.91231 1.21820 0.96815 1.00888 0.96872 1.21555 0.93920 1.01330 0.98121 0.92573 0.92531 0.92565 0.91486 0.91655 0.91317 0.91728 0.76521 0.86300 0.85592 0.81132 0.90983 0.77317 1.18194 1.17852 0.83497 0.85651 0.85948 0.85804 0.85841 0.91216 0.91242 0.91234 0.91549 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 9.19 37.16 0.34 0.47 16 2 C -0.09 0.09 2.72 -90.62 -0.25 -0.16 16 3 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 4 C -0.11 -0.01 5.20 -26.73 -0.14 -0.14 16 5 C -0.13 -0.07 5.50 -26.73 -0.15 -0.21 16 6 C 0.15 -0.01 2.45 -67.93 -0.17 -0.18 16 7 H 0.09 0.21 7.58 -51.93 -0.39 -0.19 16 8 N -0.73 0.84 5.08 -53.81 -0.27 0.57 16 9 C 0.50 0.94 7.82 -10.98 -0.09 0.86 16 10 O -0.50 -3.51 15.37 5.56 0.09 -3.43 16 11 C 0.12 -0.06 6.99 -5.19 -0.04 -0.09 16 12 N -0.36 -1.39 3.40 -62.58 -0.21 -1.60 16 13 C 0.06 0.19 9.96 -17.26 -0.17 0.02 16 14 C -0.20 -0.86 5.38 -104.76 -0.56 -1.43 16 15 C -0.03 -0.03 2.16 36.01 0.08 0.05 16 16 O -0.55 -0.07 10.40 -35.23 -0.37 -0.44 16 17 Si 0.68 -0.57 30.81 -169.99 -5.24 -5.81 16 18 C 0.13 0.83 6.66 -82.78 -0.55 0.28 16 19 C -0.02 -0.11 5.74 -104.89 -0.60 -0.71 16 20 C -0.09 -0.33 9.04 -39.26 -0.36 -0.69 16 21 C -0.13 -0.27 10.03 -39.63 -0.40 -0.67 16 22 C -0.11 -0.24 10.04 -39.52 -0.40 -0.64 16 23 C -0.13 -0.39 10.03 -39.63 -0.40 -0.79 16 24 C -0.09 -0.45 9.78 -39.26 -0.38 -0.83 16 25 N -0.25 -1.72 11.67 33.43 0.39 -1.33 16 26 C -0.13 0.25 5.39 -26.71 -0.14 0.10 16 27 C -0.11 0.16 5.21 -26.71 -0.14 0.02 16 28 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 32 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.07 0.21 8.14 -51.94 -0.42 -0.21 16 34 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.40 -1.79 8.60 -40.82 -0.35 -2.14 16 36 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 37 H 0.13 -0.56 8.07 -51.93 -0.42 -0.98 16 38 H 0.17 0.07 6.37 -52.49 -0.33 -0.27 16 39 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 40 H 0.38 -1.86 8.74 45.56 0.40 -1.46 16 41 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 42 H -0.25 -0.31 7.02 56.52 0.40 0.09 16 43 H 0.15 0.44 5.34 -52.48 -0.28 0.16 16 44 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 45 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 46 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 47 H 0.12 0.68 8.06 -52.48 -0.42 0.25 16 48 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 49 H 0.07 -0.15 8.14 -51.92 -0.42 -0.58 16 50 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 51 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 410.90 15.07 6.19 6.19 Total: 0.00 -10.96 410.90 -12.11 -23.06 By element: Atomic # 1 Polarization: -4.29 SS G_CDS: -8.18 Total: -12.47 kcal Atomic # 6 Polarization: -0.25 SS G_CDS: -4.50 Total: -4.75 kcal Atomic # 7 Polarization: -2.26 SS G_CDS: -0.10 Total: -2.36 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.28 Total: -3.86 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.24 Total: -5.81 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -10.96 -12.11 -23.06 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12622748.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.284 kcal (2) G-P(sol) polarization free energy of solvation -10.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.064 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds