Wall clock time and date at job start Sun Mar 7 2021 19:45:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09002 * 109.47097 * 2 1 4 4 C 1.53005 * 109.47197 * 119.99802 * 2 1 3 5 5 C 1.52997 * 109.47452 * 180.02562 * 4 2 1 6 6 C 1.53002 * 109.46817 * 300.00239 * 5 4 2 7 7 H 1.08992 * 109.47063 * 299.99823 * 6 5 4 8 8 N 1.46499 * 109.46799 * 179.97438 * 6 5 4 9 9 C 1.34778 * 119.99771 * 85.00174 * 8 6 5 10 10 O 1.21582 * 120.00002 * 359.97438 * 9 8 6 11 11 C 1.47567 * 119.99929 * 179.97438 * 9 8 6 12 12 C 1.40216 * 120.12253 * 179.72646 * 11 9 8 13 13 O 1.35646 * 120.00001 * 359.97438 * 12 11 9 14 14 C 1.38816 * 119.99374 * 179.70223 * 12 11 9 15 15 C 1.37768 * 120.24646 * 0.59009 * 14 12 11 16 16 C 1.39843 * 120.24255 * 359.68684 * 15 14 12 17 17 C 1.47822 * 119.99791 * 180.02562 * 16 15 14 18 18 C 1.35934 * 125.93138 * 359.97438 * 17 16 15 19 19 C 1.40972 * 106.74117 * 179.97438 * 18 17 16 20 20 C 1.34708 * 107.03012 * 0.02562 * 19 18 17 21 21 C 1.50697 * 125.66410 * 179.97438 * 20 19 18 22 22 O 1.42904 * 109.47007 * 64.99879 * 21 20 19 23 23 Si 1.86295 * 109.47177 * 184.99972 * 21 20 19 24 24 O 1.34341 * 108.66836 * 359.76626 * 20 19 18 25 25 C 1.39175 * 120.00234 * 0.02562 * 16 15 14 26 26 C 1.53000 * 109.47233 * 60.00194 * 6 5 4 27 27 C 1.52997 * 109.47060 * 299.99657 * 26 6 5 28 28 H 1.09001 * 109.47142 * 299.99965 * 1 2 3 29 29 H 1.08996 * 109.46698 * 60.00019 * 1 2 3 30 30 H 1.09002 * 109.46838 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.46935 * 60.00099 * 4 2 1 32 32 H 1.09001 * 109.46812 * 300.00441 * 4 2 1 33 33 H 1.08993 * 109.47194 * 179.97438 * 5 4 2 34 34 H 1.09002 * 109.46695 * 59.99734 * 5 4 2 35 35 H 0.97006 * 120.00568 * 264.99947 * 8 6 5 36 36 H 0.96702 * 114.00050 * 90.00424 * 13 12 11 37 37 H 1.08002 * 119.87333 * 180.27744 * 14 12 11 38 38 H 1.08000 * 119.87894 * 179.70084 * 15 14 12 39 39 H 1.08000 * 126.62999 * 359.97438 * 18 17 16 40 40 H 1.08000 * 126.48073 * 180.02562 * 19 18 17 41 41 H 1.09003 * 109.47169 * 305.00178 * 21 20 19 42 42 H 0.96694 * 113.99811 * 60.00357 * 22 21 20 43 43 H 1.48494 * 110.00195 * 179.97438 * 23 21 20 44 44 H 1.48499 * 109.99874 * 301.31984 * 23 21 20 45 45 H 1.08004 * 120.11736 * 179.97438 * 25 16 15 46 46 H 1.09002 * 109.47398 * 59.99826 * 26 6 5 47 47 H 1.09001 * 109.47194 * 180.02562 * 26 6 5 48 48 H 1.08996 * 109.47853 * 180.02562 * 27 26 6 49 49 H 1.09002 * 109.47153 * 300.00319 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0401 -0.7212 1.2493 5 6 3.5700 -0.7207 1.2497 6 6 4.0805 -1.4416 0.0004 7 1 3.7176 -2.4693 0.0002 8 7 5.5455 -1.4406 0.0005 9 6 6.2200 -2.3963 0.6700 10 8 5.6126 -3.2589 1.2742 11 6 7.6957 -2.3956 0.6696 12 6 8.4000 -3.3853 1.3700 13 8 7.7249 -4.3454 2.0500 14 6 9.7881 -3.3857 1.3627 15 6 10.4788 -2.4091 0.6791 16 6 9.7866 -1.4139 -0.0180 17 6 10.5332 -0.3690 -0.7501 18 6 11.8861 -0.2602 -0.8259 19 6 12.1585 0.8721 -1.6202 20 6 10.9710 1.3929 -1.9853 21 6 10.7746 2.6164 -2.8428 22 8 11.2772 2.3632 -4.1564 23 14 8.9588 3.0216 -2.9401 24 8 9.9911 0.6377 -1.4618 25 6 8.3949 -1.4071 -0.0225 26 6 3.5706 -0.7203 -1.2488 27 6 2.0406 -0.7208 -1.2492 28 1 -0.3633 0.5138 0.8900 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 1.6767 -1.7489 1.2493 32 1 1.6766 -0.2074 2.1392 33 1 3.9333 -1.2341 2.1399 34 1 3.9329 0.3071 1.2498 35 1 6.0302 -0.7521 -0.4813 36 1 7.5289 -5.1342 1.5261 37 1 10.3286 -4.1515 1.8991 38 1 11.5588 -2.4123 0.6814 39 1 12.6119 -0.9148 -0.3665 40 1 13.1346 1.2504 -1.8857 41 1 11.3116 3.4575 -2.4043 42 1 10.8440 1.6259 -4.6078 43 1 8.7518 4.2268 -3.7825 44 1 8.2113 1.8705 -3.5069 45 1 7.8584 -0.6391 -0.5600 46 1 3.9336 0.3075 -1.2486 47 1 3.9339 -1.2342 -2.1388 48 1 1.6772 -0.2074 -2.1394 49 1 1.6776 -1.7486 -1.2494 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13259648.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:45:09 Heat of formation + Delta-G solvation = -78.553049 kcal Electronic energy + Delta-G solvation = -31889.872766 eV Core-core repulsion = 27556.693595 eV Total energy + Delta-G solvation = -4333.179171 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.166 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.74276 -41.60294 -40.29992 -38.93244 -38.24503 -37.82518 -35.60766 -34.26787 -33.11935 -32.71712 -31.80317 -31.47413 -30.08299 -27.08266 -26.44475 -25.12350 -23.77842 -23.63042 -22.98635 -22.26799 -21.57310 -21.26547 -20.74483 -19.62683 -19.17291 -18.37514 -17.67360 -17.53045 -17.36310 -16.67820 -16.53611 -16.27394 -16.06411 -15.87120 -15.46220 -15.42284 -15.26100 -15.20425 -14.70493 -14.46308 -14.35972 -14.21397 -14.02004 -13.83446 -13.67698 -13.55450 -13.26460 -13.23543 -13.17839 -13.14226 -12.93337 -12.57711 -12.13032 -12.11748 -11.98150 -11.82171 -11.66281 -11.33537 -11.12959 -11.10228 -10.85377 -10.69347 -10.49312 -10.32169 -9.98335 -8.94448 -5.07285 -0.58299 -0.23910 0.73677 1.05291 1.40500 1.46144 1.64082 1.85313 1.94945 2.07836 2.62993 3.07349 3.10115 3.24105 3.45315 3.54239 3.65667 3.68345 3.82178 3.86784 3.93818 3.99740 4.04672 4.13452 4.17185 4.27238 4.34771 4.37473 4.44894 4.48724 4.53228 4.56919 4.59706 4.71451 4.73379 4.76018 4.79719 4.88850 4.95572 4.97669 5.01080 5.08242 5.11749 5.13111 5.17330 5.23341 5.28755 5.37066 5.37723 5.41976 5.48379 5.54874 5.93125 6.18378 6.47753 6.65722 7.24158 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.112 4.112 5 C -0.130 4.130 6 C 0.147 3.853 7 H 0.090 0.910 8 N -0.726 5.726 9 C 0.560 3.440 10 O -0.516 6.516 11 C -0.164 4.164 12 C 0.180 3.820 13 O -0.475 6.475 14 C -0.149 4.149 15 C -0.053 4.053 16 C -0.034 4.034 17 C 0.036 3.964 18 C -0.189 4.189 19 C -0.169 4.169 20 C -0.050 4.050 21 C -0.034 4.034 22 O -0.520 6.520 23 Si 0.697 3.303 24 O -0.166 6.166 25 C -0.054 4.054 26 C -0.128 4.128 27 C -0.111 4.111 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.065 0.935 32 H 0.066 0.934 33 H 0.069 0.931 34 H 0.064 0.936 35 H 0.398 0.602 36 H 0.399 0.601 37 H 0.146 0.854 38 H 0.140 0.860 39 H 0.154 0.846 40 H 0.154 0.846 41 H 0.137 0.863 42 H 0.380 0.620 43 H -0.248 1.248 44 H -0.255 1.255 45 H 0.135 0.865 46 H 0.069 0.931 47 H 0.069 0.931 48 H 0.068 0.932 49 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.983 1.586 -1.440 2.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.150 4.150 5 C -0.168 4.168 6 C 0.043 3.957 7 H 0.108 0.892 8 N -0.378 5.378 9 C 0.347 3.653 10 O -0.392 6.392 11 C -0.167 4.167 12 C 0.133 3.867 13 O -0.287 6.287 14 C -0.167 4.167 15 C -0.071 4.071 16 C -0.035 4.035 17 C -0.014 4.014 18 C -0.208 4.208 19 C -0.188 4.188 20 C -0.100 4.100 21 C -0.144 4.144 22 O -0.327 6.327 23 Si 0.596 3.404 24 O -0.064 6.064 25 C -0.073 4.073 26 C -0.166 4.166 27 C -0.149 4.149 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.233 0.767 36 H 0.258 0.742 37 H 0.163 0.837 38 H 0.158 0.842 39 H 0.172 0.828 40 H 0.172 0.828 41 H 0.155 0.845 42 H 0.229 0.771 43 H -0.172 1.172 44 H -0.179 1.179 45 H 0.153 0.847 46 H 0.088 0.912 47 H 0.087 0.913 48 H 0.087 0.913 49 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -0.081 1.987 -0.964 2.210 hybrid contribution 1.033 -0.730 -1.372 1.866 sum 0.952 1.257 -2.336 2.819 Atomic orbital electron populations 1.21834 0.94988 1.01996 1.01830 1.21189 0.95717 0.99679 0.94729 0.91080 1.21563 0.94562 1.01110 0.97768 1.21923 0.95981 1.00775 0.98138 1.21025 0.78386 1.01114 0.95151 0.89221 1.46040 1.07480 1.30583 1.53693 1.17974 0.86507 0.81704 0.79085 1.90832 1.69417 1.36857 1.42088 1.20319 0.93764 0.99659 1.02998 1.18608 0.89527 0.89666 0.88915 1.84753 1.76131 1.29019 1.38766 1.21403 0.93056 1.00875 1.01386 1.21121 1.00624 0.91703 0.93689 1.17575 0.91997 0.94150 0.99754 1.20278 0.91430 0.90726 0.98934 1.21863 0.94363 1.00628 1.03900 1.21576 0.98856 0.97306 1.01058 1.22837 0.86541 0.97436 1.03186 1.24341 1.14150 0.93536 0.82348 1.86670 1.63554 1.56042 1.26439 0.94531 0.73701 0.81546 0.90607 1.83923 1.36332 1.33236 1.52867 1.21297 0.93112 0.96687 0.96169 1.21826 0.96779 1.00943 0.97024 1.21543 0.93949 1.01316 0.98071 0.92553 0.92629 0.92584 0.91620 0.91524 0.91248 0.91713 0.76715 0.74176 0.83652 0.84231 0.82788 0.82796 0.84510 0.77150 1.17223 1.17874 0.84715 0.91247 0.91256 0.91325 0.91533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.15 9.20 37.16 0.34 0.49 16 2 C -0.09 0.10 2.72 -90.62 -0.25 -0.15 16 3 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 4 C -0.11 0.02 5.20 -26.73 -0.14 -0.12 16 5 C -0.13 -0.06 5.49 -26.73 -0.15 -0.21 16 6 C 0.15 0.03 2.45 -67.93 -0.17 -0.14 16 7 H 0.09 0.19 7.58 -51.93 -0.39 -0.21 16 8 N -0.73 -0.10 5.03 -54.84 -0.28 -0.38 16 9 C 0.56 1.53 7.73 -12.46 -0.10 1.43 16 10 O -0.52 -3.11 14.81 -16.66 -0.25 -3.36 16 11 C -0.16 -0.23 5.88 -104.89 -0.62 -0.84 16 12 C 0.18 0.24 6.72 -38.63 -0.26 -0.02 16 13 O -0.48 -1.00 11.55 -40.59 -0.47 -1.47 16 14 C -0.15 0.11 9.96 -39.54 -0.39 -0.29 16 15 C -0.05 0.06 9.54 -39.15 -0.37 -0.31 16 16 C -0.03 0.00 5.87 -105.03 -0.62 -0.61 16 17 C 0.04 0.02 7.03 -36.49 -0.26 -0.24 16 18 C -0.19 0.02 10.26 -39.37 -0.40 -0.39 16 19 C -0.17 -0.04 10.78 -39.80 -0.43 -0.47 16 20 C -0.05 0.00 6.20 -35.56 -0.22 -0.22 16 21 C -0.03 0.04 2.98 36.00 0.11 0.15 16 22 O -0.52 -0.01 12.88 -35.23 -0.45 -0.47 16 23 Si 0.70 -1.16 32.11 -169.99 -5.46 -6.62 16 24 O -0.17 -0.09 8.80 4.57 0.04 -0.05 16 25 C -0.05 0.01 9.20 -38.78 -0.36 -0.35 16 26 C -0.13 0.20 5.39 -26.73 -0.14 0.05 16 27 C -0.11 0.15 5.21 -26.73 -0.14 0.01 16 28 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 34 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.40 -0.84 6.63 -40.82 -0.27 -1.11 16 36 H 0.40 -0.65 9.06 45.56 0.41 -0.24 16 37 H 0.15 -0.36 8.06 -52.49 -0.42 -0.79 16 38 H 0.14 -0.48 6.96 -52.49 -0.37 -0.84 16 39 H 0.15 -0.34 7.25 -52.49 -0.38 -0.72 16 40 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 41 H 0.14 -0.35 7.96 -51.93 -0.41 -0.76 16 42 H 0.38 -1.01 8.70 45.56 0.40 -0.62 16 43 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 44 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 45 H 0.14 -0.26 6.24 -52.48 -0.33 -0.59 16 46 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 48 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 49 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 401.38 15.07 6.05 6.05 Total: 0.00 -8.25 401.38 -11.83 -20.08 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -6.46 Total: -11.56 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -4.56 Total: -2.22 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.28 Total: -0.38 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.13 Total: -5.35 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.46 Total: -6.62 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -8.25 -11.83 -20.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13259648.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.476 kcal (2) G-P(sol) polarization free energy of solvation -8.249 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.077 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds