Wall clock time and date at job start Sun Mar 7 2021 19:45:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.09004 * 109.47006 * 2 1 4 4 C 1.53003 * 109.47197 * 120.00069 * 2 1 3 5 5 C 1.52994 * 109.46910 * 180.02562 * 4 2 1 6 6 C 1.53004 * 109.47317 * 300.00182 * 5 4 2 7 7 H 1.09004 * 109.46694 * 300.00116 * 6 5 4 8 8 N 1.46505 * 109.47302 * 180.02562 * 6 5 4 9 9 C 1.34776 * 119.99971 * 154.99897 * 8 6 5 10 10 O 1.21576 * 119.99777 * 359.97438 * 9 8 6 11 11 C 1.47646 * 119.99815 * 180.02562 * 9 8 6 12 12 C 1.40169 * 119.97607 * 359.97438 * 11 9 8 13 13 C 1.36354 * 120.67312 * 180.02562 * 12 11 9 14 14 C 1.39329 * 120.23695 * 0.02562 * 13 12 11 15 15 N 1.37402 * 133.25964 * 179.97438 * 14 13 12 16 16 C 1.36864 * 109.98449 * 179.79558 * 15 14 13 17 17 C 1.34187 * 109.96416 * 0.38612 * 16 15 14 18 18 C 1.50707 * 126.53717 * 179.89689 * 17 16 15 19 19 O 1.42903 * 109.46442 * 254.68091 * 18 17 16 20 20 Si 1.86293 * 109.47256 * 14.67658 * 18 17 16 21 21 C 1.40908 * 119.63789 * 0.02562 * 14 13 12 22 22 C 1.39186 * 119.97589 * 179.97438 * 11 9 8 23 23 C 1.52995 * 109.47236 * 60.00236 * 6 5 4 24 24 C 1.52995 * 109.47304 * 240.00655 * 2 1 3 25 25 H 1.08995 * 109.46749 * 299.99537 * 1 2 3 26 26 H 1.08999 * 109.46993 * 59.99580 * 1 2 3 27 27 H 1.08996 * 109.46780 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.46574 * 60.00315 * 4 2 1 29 29 H 1.09000 * 109.46912 * 300.00071 * 4 2 1 30 30 H 1.09003 * 109.47345 * 180.02562 * 5 4 2 31 31 H 1.09004 * 109.47333 * 59.99906 * 5 4 2 32 32 H 0.96998 * 119.99519 * 334.99662 * 8 6 5 33 33 H 1.07999 * 119.66373 * 0.02660 * 12 11 9 34 34 H 1.07999 * 119.88322 * 180.02562 * 13 12 11 35 35 H 0.97001 * 125.00376 * 0.03263 * 15 14 13 36 36 H 1.07993 * 125.01767 * 180.23288 * 16 15 14 37 37 H 1.08999 * 109.47345 * 134.68161 * 18 17 16 38 38 H 0.96700 * 114.00311 * 60.00230 * 19 18 17 39 39 H 1.48501 * 109.99918 * 58.68485 * 20 18 17 40 40 H 1.48506 * 109.99973 * 180.02562 * 20 18 17 41 41 H 1.08003 * 120.30457 * 0.02562 * 22 11 9 42 42 H 1.08996 * 109.47265 * 59.99953 * 23 6 5 43 43 H 1.08995 * 109.47550 * 180.02562 * 23 6 5 44 44 H 1.09004 * 109.46554 * 299.99621 * 24 2 1 45 45 H 1.08993 * 109.47685 * 59.99388 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0401 -0.7213 1.2493 5 6 3.5700 -0.7207 1.2495 6 6 4.0806 -1.4415 0.0002 7 1 3.7176 -2.4693 0.0000 8 7 5.5456 -1.4415 0.0008 9 6 6.2198 -2.3973 -0.6688 10 8 5.6121 -3.2599 -1.2728 11 6 7.6962 -2.3976 -0.6677 12 6 8.3962 -1.4032 0.0293 13 6 9.7597 -1.3895 0.0394 14 6 10.4762 -2.3679 -0.6466 15 7 11.8186 -2.6077 -0.8149 16 6 12.0014 -3.7210 -1.5897 17 6 10.8127 -4.2277 -1.9514 18 6 10.5796 -5.4471 -2.8058 19 8 10.1607 -5.0414 -4.1104 20 14 12.1599 -6.4248 -2.9370 21 6 9.7842 -3.3724 -1.3520 22 6 8.3920 -3.3853 -1.3589 23 6 3.5706 -0.7202 -1.2490 24 6 2.0401 -0.7211 -1.2493 25 1 -0.3633 0.5137 0.8900 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3633 -1.0276 -0.0005 28 1 1.6768 -1.7489 1.2491 29 1 1.6767 -0.2074 2.1392 30 1 3.9335 -1.2349 2.1393 31 1 3.9330 0.3071 1.2497 32 1 6.0303 -0.7534 0.4830 33 1 7.8501 -0.6400 0.5639 34 1 10.2861 -0.6176 0.5810 35 1 12.5317 -2.0695 -0.4370 36 1 12.9607 -4.1298 -1.8707 37 1 9.8058 -6.0663 -2.3519 38 1 10.8021 -4.4861 -4.5746 39 1 12.6231 -6.8254 -1.5842 40 1 11.9434 -7.6297 -3.7777 41 1 7.8568 -4.1532 -1.8977 42 1 3.9335 0.3075 -1.2487 43 1 3.9339 -1.2339 -2.1390 44 1 1.6768 -1.7488 -1.2493 45 1 1.6767 -0.2073 -2.1392 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13287722.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:45:12 Heat of formation + Delta-G solvation = -26.582076 kcal Electronic energy + Delta-G solvation = -25848.034077 eV Core-core repulsion = 22217.273150 eV Total energy + Delta-G solvation = -3630.760927 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.47647 -40.97861 -39.33846 -37.86187 -37.34899 -35.58380 -33.26618 -32.34026 -31.74124 -30.71271 -30.29783 -26.95872 -26.46258 -24.54342 -23.73523 -23.44517 -22.18866 -21.34650 -20.92815 -20.53432 -19.29112 -18.41718 -17.59431 -17.34498 -16.85363 -16.28671 -16.03561 -15.82443 -15.54681 -15.26591 -15.22750 -15.13424 -15.08759 -14.75242 -14.68176 -14.17333 -14.03726 -13.81681 -13.75852 -13.41689 -13.18295 -13.13608 -12.64989 -12.46304 -12.27433 -12.17120 -12.07589 -11.89263 -11.85542 -11.64747 -11.28830 -11.07684 -10.77678 -10.69348 -10.31031 -9.93355 -9.31045 -8.81926 -5.07822 -0.02889 0.20222 1.31372 1.47984 1.65708 1.97722 2.00702 2.05133 2.24446 3.00132 3.57654 3.58629 3.68243 3.72764 3.75138 3.81591 3.84736 3.97887 4.07726 4.11560 4.22566 4.37429 4.42470 4.43124 4.49094 4.53350 4.53987 4.58430 4.59295 4.75889 4.80209 4.81275 4.92691 5.00650 5.03384 5.07234 5.17249 5.21057 5.26235 5.28402 5.32821 5.38919 5.43812 5.50751 5.54390 5.61250 5.65491 5.99258 6.36362 6.63594 6.70485 7.39882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.094 4.094 3 H 0.070 0.930 4 C -0.111 4.111 5 C -0.127 4.127 6 C 0.146 3.854 7 H 0.089 0.911 8 N -0.726 5.726 9 C 0.564 3.436 10 O -0.537 6.537 11 C -0.168 4.168 12 C -0.067 4.067 13 C -0.134 4.134 14 C 0.118 3.882 15 N -0.585 5.585 16 C 0.061 3.939 17 C -0.192 4.192 18 C -0.034 4.034 19 O -0.539 6.539 20 Si 0.688 3.312 21 C -0.103 4.103 22 C 0.007 3.993 23 C -0.129 4.129 24 C -0.112 4.112 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.066 0.934 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.068 0.932 32 H 0.398 0.602 33 H 0.128 0.872 34 H 0.127 0.873 35 H 0.421 0.579 36 H 0.179 0.821 37 H 0.112 0.888 38 H 0.376 0.624 39 H -0.256 1.256 40 H -0.254 1.254 41 H 0.138 0.862 42 H 0.063 0.937 43 H 0.068 0.932 44 H 0.065 0.935 45 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.355 5.043 2.256 7.694 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.165 4.165 6 C 0.042 3.958 7 H 0.107 0.893 8 N -0.377 5.377 9 C 0.353 3.647 10 O -0.415 6.415 11 C -0.173 4.173 12 C -0.086 4.086 13 C -0.155 4.155 14 C 0.009 3.991 15 N -0.188 5.188 16 C -0.065 4.065 17 C -0.199 4.199 18 C -0.146 4.146 19 O -0.344 6.344 20 Si 0.589 3.411 21 C -0.108 4.108 22 C -0.013 4.013 23 C -0.168 4.168 24 C -0.150 4.150 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.085 0.915 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.087 0.913 32 H 0.233 0.767 33 H 0.146 0.854 34 H 0.145 0.855 35 H 0.259 0.741 36 H 0.195 0.805 37 H 0.130 0.870 38 H 0.223 0.777 39 H -0.181 1.181 40 H -0.178 1.178 41 H 0.156 0.844 42 H 0.082 0.918 43 H 0.087 0.913 44 H 0.084 0.916 45 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 4.904 3.337 2.178 6.319 hybrid contribution 0.129 0.827 0.807 1.163 sum 5.033 4.165 2.984 7.182 Atomic orbital electron populations 1.21835 0.95026 1.01995 1.01790 1.21186 0.95684 0.99639 0.94786 0.91140 1.21545 0.94057 1.01299 0.98001 1.21814 0.96685 1.00853 0.97108 1.21012 0.78744 1.01054 0.95016 0.89299 1.45986 1.07243 1.30688 1.53828 1.18177 0.87069 0.81036 0.78437 1.90793 1.69908 1.37413 1.43369 1.19572 0.92579 0.99609 1.05504 1.20588 0.93362 0.97187 0.97511 1.19663 0.93581 0.99110 1.03133 1.18431 0.83559 0.97454 0.99620 1.41731 1.05912 1.25665 1.45462 1.21674 0.98993 0.89253 0.96610 1.20762 0.91439 1.01085 1.06656 1.24415 1.09553 0.97037 0.83580 1.86539 1.48363 1.72522 1.27004 0.95335 0.80761 0.82499 0.82525 1.18930 0.92799 0.97046 1.02002 1.20702 0.91460 0.95855 0.93250 1.21929 0.95910 1.00694 0.98255 1.21573 0.94638 1.01106 0.97719 0.92636 0.92594 0.92577 0.91528 0.91360 0.91219 0.91346 0.76697 0.85435 0.85464 0.74125 0.80462 0.87029 0.77662 1.18096 1.17843 0.84425 0.91806 0.91284 0.91614 0.91584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.08 9.19 37.16 0.34 0.42 16 2 C -0.09 0.05 2.72 -90.62 -0.25 -0.20 16 3 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 4 C -0.11 0.09 5.20 -26.73 -0.14 -0.05 16 5 C -0.13 0.13 5.39 -26.73 -0.14 -0.01 16 6 C 0.15 0.15 2.45 -67.93 -0.17 -0.02 16 7 H 0.09 0.28 7.58 -51.93 -0.39 -0.11 16 8 N -0.73 -0.65 5.03 -54.81 -0.28 -0.93 16 9 C 0.56 2.30 7.73 -12.42 -0.10 2.20 16 10 O -0.54 -4.27 15.99 5.30 0.08 -4.18 16 11 C -0.17 -0.48 5.87 -104.98 -0.62 -1.09 16 12 C -0.07 0.00 9.46 -39.54 -0.37 -0.38 16 13 C -0.13 0.05 10.00 -39.85 -0.40 -0.35 16 14 C 0.12 0.09 7.27 -83.95 -0.61 -0.52 16 15 N -0.59 1.13 6.05 -10.61 -0.06 1.07 16 16 C 0.06 -0.12 10.43 -16.73 -0.17 -0.29 16 17 C -0.19 -0.14 5.58 -102.69 -0.57 -0.71 16 18 C -0.03 -0.02 3.06 36.01 0.11 0.09 16 19 O -0.54 -0.75 12.88 -35.23 -0.45 -1.20 16 20 Si 0.69 -0.96 30.75 -169.99 -5.23 -6.18 16 21 C -0.10 -0.27 6.34 -105.16 -0.67 -0.94 16 22 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 23 C -0.13 -0.15 5.50 -26.71 -0.15 -0.29 16 24 C -0.11 -0.05 5.21 -26.71 -0.14 -0.19 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.40 -0.74 6.60 -40.82 -0.27 -1.01 16 33 H 0.13 -0.37 6.36 -52.49 -0.33 -0.70 16 34 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 35 H 0.42 -2.12 8.96 -40.82 -0.37 -2.48 16 36 H 0.18 -1.00 6.34 -52.49 -0.33 -1.33 16 37 H 0.11 0.20 7.96 -51.93 -0.41 -0.21 16 38 H 0.38 -1.07 8.70 45.56 0.40 -0.68 16 39 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 40 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 41 H 0.14 0.71 7.64 -52.48 -0.40 0.31 16 42 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 43 H 0.07 0.23 8.14 -51.93 -0.42 -0.19 16 44 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 45 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 361.88 15.07 5.45 5.45 Total: 0.00 -9.15 361.88 -11.71 -20.85 By element: Atomic # 1 Polarization: -5.38 SS G_CDS: -6.81 Total: -12.19 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -4.41 Total: -2.68 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.34 Total: 0.14 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -0.37 Total: -5.38 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.23 Total: -6.18 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.15 -11.71 -20.85 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13287722.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.731 kcal (2) G-P(sol) polarization free energy of solvation -9.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.877 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.851 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds