Wall clock time and date at job start Sun Mar 7 2021 19:45:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38979 * 119.94945 * 2 1 4 4 O 1.35710 * 119.91648 * 359.97438 * 3 2 1 5 5 C 1.39018 * 120.17280 * 179.97438 * 3 2 1 6 6 C 1.50696 * 119.95722 * 180.02562 * 5 3 2 7 7 O 1.42899 * 109.46960 * 285.00007 * 6 5 3 8 8 Si 1.86303 * 109.47364 * 164.99859 * 6 5 3 9 9 C 1.37683 * 120.08873 * 359.97438 * 5 3 2 10 10 C 1.39752 * 119.91242 * 0.02562 * 9 5 3 11 11 C 1.47606 * 120.09110 * 180.02562 * 10 9 5 12 12 O 1.21579 * 119.99895 * 359.97438 * 11 10 9 13 13 N 1.34777 * 120.00258 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00070 * 179.97438 * 13 11 10 15 15 H 1.08999 * 109.47285 * 34.99384 * 14 13 11 16 16 C 1.52999 * 109.47033 * 154.99863 * 14 13 11 17 17 C 1.53002 * 109.46913 * 179.97438 * 16 14 13 18 18 C 1.53003 * 109.47302 * 299.99616 * 17 16 14 19 19 H 1.08999 * 109.47025 * 300.00137 * 18 17 16 20 20 C 1.52993 * 109.47321 * 179.97438 * 18 17 16 21 21 C 1.53000 * 109.46618 * 59.99814 * 18 17 16 22 22 C 1.52997 * 109.47731 * 300.00252 * 21 18 17 23 23 C 1.37718 * 119.95887 * 179.72127 * 2 1 3 24 24 H 1.08999 * 109.47015 * 90.00363 * 1 2 3 25 25 H 1.09000 * 109.46646 * 209.99515 * 1 2 3 26 26 H 1.09000 * 109.47248 * 330.00233 * 1 2 3 27 27 H 0.96696 * 113.99724 * 90.00154 * 4 3 2 28 28 H 1.08999 * 109.47111 * 44.99778 * 6 5 3 29 29 H 0.96698 * 114.00003 * 299.99290 * 7 6 5 30 30 H 1.48500 * 110.00068 * 180.02562 * 8 6 5 31 31 H 1.48501 * 109.99991 * 301.31804 * 8 6 5 32 32 H 1.08006 * 120.04686 * 180.02562 * 9 5 3 33 33 H 0.97007 * 119.99444 * 359.97438 * 13 11 10 34 34 H 1.08997 * 109.46888 * 299.99404 * 16 14 13 35 35 H 1.08999 * 109.47476 * 59.99639 * 16 14 13 36 36 H 1.09004 * 109.47087 * 60.00108 * 17 16 14 37 37 H 1.09004 * 109.46887 * 179.97438 * 17 16 14 38 38 H 1.09004 * 109.46719 * 60.00178 * 20 18 17 39 39 H 1.08999 * 109.47469 * 179.97438 * 20 18 17 40 40 H 1.09004 * 109.47235 * 300.00594 * 20 18 17 41 41 H 1.08999 * 109.47158 * 60.00405 * 21 18 17 42 42 H 1.08999 * 109.46963 * 179.97438 * 21 18 17 43 43 H 1.08999 * 109.46924 * 300.00296 * 22 21 18 44 44 H 1.08998 * 109.47563 * 180.02562 * 22 21 18 45 45 H 1.08004 * 120.04171 * 0.02775 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2009 1.2042 0.0000 4 8 1.5196 2.3779 -0.0005 5 6 3.5911 1.2096 0.0005 6 6 4.3385 2.5182 0.0011 7 8 4.2724 3.1050 -1.3001 8 14 6.1196 2.2159 0.4564 9 6 4.2860 0.0210 0.0016 10 6 3.5920 -1.1920 0.0016 11 6 4.3330 -2.4686 0.0033 12 8 5.5487 -2.4657 0.0043 13 7 3.6618 -3.6374 0.0028 14 6 4.3973 -4.9043 0.0039 15 1 5.3071 -4.7958 0.5943 16 6 3.5220 -6.0016 0.6128 17 6 4.2899 -7.3249 0.6134 18 6 4.6558 -7.7030 -0.8234 19 1 3.7458 -7.8112 -1.4135 20 6 5.4242 -9.0259 -0.8227 21 6 5.5310 -6.6056 -1.4322 22 6 4.7631 -5.2823 -1.4328 23 6 2.1948 -1.1932 0.0058 24 1 -0.3633 -0.0001 -1.0277 25 1 -0.3632 -0.8901 0.5138 26 1 -0.3634 0.8900 0.5138 27 1 1.3219 2.7182 0.8827 28 1 3.8874 3.1939 0.7277 29 1 4.6565 2.5574 -1.9985 30 1 6.8674 3.4989 0.4611 31 1 6.2004 1.5766 1.7943 32 1 5.3660 0.0260 0.0024 33 1 2.6918 -3.6396 0.0017 34 1 3.2611 -5.7321 1.6362 35 1 2.6122 -6.1101 0.0224 36 1 5.1999 -7.2167 1.2036 37 1 3.6665 -8.1066 1.0476 38 1 4.8009 -9.8078 -0.3887 39 1 5.6844 -9.2955 -1.8463 40 1 6.3342 -8.9173 -0.2326 41 1 6.4410 -6.4974 -0.8421 42 1 5.7920 -6.8751 -2.4556 43 1 3.8531 -5.3905 -2.0229 44 1 5.3865 -4.5006 -1.8670 45 1 1.6548 -2.1285 0.0099 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13287732.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:45:20 Heat of formation + Delta-G solvation = -105.472337 kcal Electronic energy + Delta-G solvation = -25545.601098 eV Core-core repulsion = 21914.615232 eV Total energy + Delta-G solvation = -3630.985865 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.166 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.76634 -40.74566 -39.30871 -37.82748 -37.47721 -35.74854 -34.04575 -32.73443 -31.82666 -31.22685 -28.12524 -27.24751 -26.69881 -24.59542 -23.79389 -22.37329 -21.96535 -21.42314 -20.73305 -19.61642 -18.74735 -18.06358 -17.53298 -16.88474 -16.53219 -16.24149 -16.00376 -15.63020 -15.53368 -15.29709 -15.24528 -14.97121 -14.77298 -14.43144 -14.28725 -14.11682 -13.97348 -13.67306 -13.37377 -13.26480 -13.20412 -13.07370 -12.85380 -12.57992 -12.31225 -12.15267 -11.99980 -11.97811 -11.73050 -11.64264 -11.36644 -11.16673 -10.86898 -10.40452 -10.11717 -10.00654 -9.68403 -4.98135 -0.40096 0.03649 1.26993 1.64349 1.69873 1.97733 2.04588 2.58628 3.01586 3.34092 3.50215 3.52068 3.62336 3.65809 3.69252 3.86249 3.91916 4.02732 4.13474 4.14714 4.24213 4.34392 4.38658 4.43304 4.46123 4.49574 4.51007 4.58217 4.62057 4.70223 4.73532 4.86841 4.93090 4.95634 4.97798 5.03878 5.05877 5.10174 5.14129 5.20314 5.23603 5.26521 5.34509 5.43769 5.48198 5.53242 6.43326 6.52012 6.59220 7.17346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.118 4.118 3 C 0.159 3.841 4 O -0.483 6.483 5 C -0.152 4.152 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.045 4.045 10 C -0.138 4.138 11 C 0.561 3.439 12 O -0.531 6.531 13 N -0.723 5.723 14 C 0.145 3.855 15 H 0.091 0.909 16 C -0.127 4.127 17 C -0.111 4.111 18 C -0.095 4.095 19 H 0.070 0.930 20 C -0.149 4.149 21 C -0.112 4.112 22 C -0.129 4.129 23 C -0.066 4.066 24 H 0.076 0.924 25 H 0.069 0.931 26 H 0.071 0.929 27 H 0.392 0.608 28 H 0.112 0.888 29 H 0.378 0.622 30 H -0.250 1.250 31 H -0.255 1.255 32 H 0.145 0.855 33 H 0.399 0.601 34 H 0.069 0.931 35 H 0.068 0.932 36 H 0.066 0.934 37 H 0.068 0.932 38 H 0.055 0.945 39 H 0.055 0.945 40 H 0.055 0.945 41 H 0.066 0.934 42 H 0.066 0.934 43 H 0.064 0.936 44 H 0.069 0.931 45 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.522 -3.784 0.494 5.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.118 4.118 3 C 0.113 3.887 4 O -0.293 6.293 5 C -0.153 4.153 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.064 4.064 10 C -0.141 4.141 11 C 0.349 3.651 12 O -0.408 6.408 13 N -0.375 5.375 14 C 0.041 3.959 15 H 0.109 0.891 16 C -0.165 4.165 17 C -0.149 4.149 18 C -0.113 4.113 19 H 0.089 0.911 20 C -0.207 4.207 21 C -0.150 4.150 22 C -0.168 4.168 23 C -0.085 4.085 24 H 0.095 0.905 25 H 0.088 0.912 26 H 0.090 0.910 27 H 0.250 0.750 28 H 0.129 0.871 29 H 0.225 0.775 30 H -0.174 1.174 31 H -0.179 1.179 32 H 0.162 0.838 33 H 0.234 0.766 34 H 0.088 0.912 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.087 0.913 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.074 0.926 41 H 0.084 0.916 42 H 0.085 0.915 43 H 0.082 0.918 44 H 0.088 0.912 45 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.249 -3.189 0.812 3.986 hybrid contribution -1.217 0.151 0.654 1.390 sum -3.466 -3.038 1.466 4.836 Atomic orbital electron populations 1.20698 0.89689 1.03113 1.03164 1.20217 0.97312 0.92117 1.02166 1.18318 0.88819 0.85269 0.96266 1.84821 1.75642 1.35665 1.33201 1.20687 0.93929 0.96055 1.04591 1.24860 1.09343 0.92822 0.89552 1.86553 1.84536 1.46646 1.15893 0.94636 0.77354 0.83807 0.86426 1.20944 0.99987 0.90153 0.95281 1.19845 0.93467 0.93503 1.07293 1.18126 0.87273 0.83566 0.76169 1.90806 1.13207 1.87483 1.49293 1.46011 1.10299 1.05605 1.75548 1.21060 0.95916 0.81731 0.97167 0.89109 1.21817 0.98742 0.94671 1.01273 1.21549 1.00450 0.96048 0.96870 1.21185 0.98910 0.94992 0.96224 0.91116 1.21836 1.00322 0.96567 1.01947 1.21564 0.98506 0.93637 1.01329 1.21922 1.00814 0.97850 0.96203 1.21095 0.92606 0.97785 0.97023 0.90492 0.91209 0.91027 0.75032 0.87100 0.77502 1.17410 1.17894 0.83770 0.76604 0.91191 0.91302 0.91497 0.91306 0.92624 0.92559 0.92555 0.91575 0.91511 0.91758 0.91205 0.85013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.23 9.79 36.01 0.35 0.59 16 2 C -0.12 0.05 5.89 -104.53 -0.62 -0.56 16 3 C 0.16 0.10 6.66 -39.02 -0.26 -0.16 16 4 O -0.48 -0.14 11.84 -18.83 -0.22 -0.36 16 5 C -0.15 -0.11 5.27 -104.54 -0.55 -0.66 16 6 C -0.05 -0.03 2.37 36.00 0.09 0.05 16 7 O -0.53 -0.81 12.88 -35.23 -0.45 -1.26 16 8 Si 0.68 0.23 29.91 -169.99 -5.08 -4.85 16 9 C -0.05 -0.05 8.20 -39.22 -0.32 -0.37 16 10 C -0.14 -0.11 5.88 -104.96 -0.62 -0.72 16 11 C 0.56 1.08 7.73 -12.44 -0.10 0.98 16 12 O -0.53 -2.80 16.00 5.30 0.08 -2.72 16 13 N -0.72 0.54 5.03 -54.83 -0.28 0.26 16 14 C 0.15 -0.07 2.45 -67.93 -0.17 -0.24 16 15 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 16 C -0.13 0.28 5.39 -26.73 -0.14 0.13 16 17 C -0.11 0.20 5.20 -26.73 -0.14 0.06 16 18 C -0.09 0.14 2.72 -90.62 -0.25 -0.11 16 19 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 20 C -0.15 0.20 9.19 37.15 0.34 0.54 16 21 C -0.11 0.09 5.20 -26.73 -0.14 -0.05 16 22 C -0.13 0.04 5.49 -26.73 -0.15 -0.11 16 23 C -0.07 0.07 9.18 -39.22 -0.36 -0.29 16 24 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 25 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 26 H 0.07 -0.17 7.52 -51.93 -0.39 -0.56 16 27 H 0.39 -1.56 9.06 45.56 0.41 -1.14 16 28 H 0.11 0.04 7.82 -51.93 -0.41 -0.37 16 29 H 0.38 -0.79 8.70 45.56 0.40 -0.40 16 30 H -0.25 -0.78 7.11 56.52 0.40 -0.37 16 31 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 32 H 0.15 0.09 4.70 -52.48 -0.25 -0.16 16 33 H 0.40 -1.31 6.62 -40.82 -0.27 -1.58 16 34 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 45 H 0.13 -0.51 6.39 -52.48 -0.34 -0.84 16 LS Contribution 358.81 15.07 5.41 5.41 Total: 0.00 -7.74 358.81 -9.92 -17.66 By element: Atomic # 1 Polarization: -6.87 SS G_CDS: -6.35 Total: -13.22 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -3.02 Total: -0.92 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.28 Total: 0.26 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.59 Total: -4.34 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.08 Total: -4.85 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -7.74 -9.92 -17.66 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13287732.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.814 kcal (2) G-P(sol) polarization free energy of solvation -7.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.915 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.659 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds