Wall clock time and date at job start Sun Mar 7 2021 19:45:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09000 * 109.46497 * 2 1 4 4 C 1.52996 * 109.46969 * 119.99840 * 2 1 3 5 5 C 1.53002 * 109.46972 * 180.02562 * 4 2 1 6 6 C 1.52997 * 109.46817 * 299.99733 * 5 4 2 7 7 H 1.09001 * 109.47502 * 300.00518 * 6 5 4 8 8 N 1.46500 * 109.47007 * 180.02562 * 6 5 4 9 9 C 1.34773 * 120.00050 * 85.00124 * 8 6 5 10 10 O 1.21595 * 120.00038 * 0.02562 * 9 8 6 11 11 C 1.47563 * 119.99792 * 179.97438 * 9 8 6 12 12 C 1.39824 * 120.00376 * 359.72683 * 11 9 8 13 13 C 1.36561 * 119.99975 * 179.73678 * 12 11 9 14 14 C 1.39821 * 120.00170 * 0.56147 * 13 12 11 15 15 C 1.47560 * 120.00254 * 179.71868 * 14 13 12 16 16 C 1.34980 * 125.27736 * 359.96907 * 15 14 13 17 17 C 1.37796 * 114.70397 * 179.97438 * 16 15 14 18 18 C 1.33739 * 115.07883 * 0.02562 * 17 16 15 19 19 C 1.50699 * 125.11517 * 179.97438 * 18 17 16 20 20 O 1.42905 * 109.47473 * 300.00156 * 19 18 17 21 21 Si 1.86305 * 109.46984 * 179.97438 * 19 18 17 22 22 S 1.75854 * 109.76323 * 359.77358 * 18 17 16 23 23 C 1.39825 * 120.00137 * 359.69174 * 14 13 12 24 24 C 1.36568 * 119.99853 * 0.02562 * 23 14 13 25 25 C 1.53006 * 109.47127 * 60.00361 * 6 5 4 26 26 C 1.52997 * 109.47143 * 239.99770 * 2 1 3 27 27 H 1.09000 * 109.47312 * 300.00221 * 1 2 3 28 28 H 1.09002 * 109.47593 * 60.00252 * 1 2 3 29 29 H 1.09004 * 109.46930 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47452 * 59.99938 * 4 2 1 31 31 H 1.09000 * 109.47054 * 300.00097 * 4 2 1 32 32 H 1.09002 * 109.47070 * 179.97438 * 5 4 2 33 33 H 1.08996 * 109.47407 * 59.99513 * 5 4 2 34 34 H 0.97002 * 120.00030 * 265.00025 * 8 6 5 35 35 H 1.08010 * 119.99976 * 0.02562 * 12 11 9 36 36 H 1.08004 * 120.00085 * 180.27132 * 13 12 11 37 37 H 1.08009 * 122.64695 * 359.94775 * 16 15 14 38 38 H 1.07999 * 122.45737 * 179.97438 * 17 16 15 39 39 H 1.08997 * 109.47086 * 60.00629 * 19 18 17 40 40 H 0.96695 * 113.99389 * 299.99993 * 20 19 18 41 41 H 1.48499 * 109.99823 * 180.02562 * 21 19 18 42 42 H 1.48494 * 110.00087 * 301.32172 * 21 19 18 43 43 H 1.07993 * 120.00282 * 180.02562 * 23 14 13 44 44 H 1.07997 * 119.99963 * 179.97438 * 24 23 14 45 45 H 1.08993 * 109.46955 * 60.00011 * 25 6 5 46 46 H 1.09000 * 109.47050 * 179.97438 * 25 6 5 47 47 H 1.09002 * 109.47153 * 60.00035 * 26 2 1 48 48 H 1.08993 * 109.47194 * 300.00323 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 6 2.0400 -0.7212 1.2492 5 6 3.5700 -0.7206 1.2496 6 6 4.0804 -1.4416 0.0004 7 1 3.7174 -2.4694 0.0001 8 7 5.5454 -1.4416 0.0010 9 6 6.2190 -2.3979 0.6704 10 8 5.6108 -3.2609 1.2736 11 6 7.6947 -2.3982 0.6705 12 6 8.3941 -1.4098 -0.0287 13 6 9.7597 -1.4070 -0.0241 14 6 10.4586 -2.3993 0.6700 15 6 11.9342 -2.3999 0.6698 16 6 12.7140 -1.4978 0.0374 17 6 14.0685 -1.7051 0.1828 18 6 14.4031 -2.7657 0.9255 19 6 15.8135 -3.2007 1.2297 20 8 16.4963 -3.4913 0.0084 21 14 15.7760 -4.7259 2.2990 22 16 12.9496 -3.5728 1.4986 23 6 9.7592 -3.3909 1.3649 24 6 8.3935 -3.3904 1.3651 25 6 3.5705 -0.7204 -1.2489 26 6 2.0400 -0.7213 -1.2492 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 1.6767 -1.7488 1.2493 31 1 1.6766 -0.2073 2.1392 32 1 3.9333 -1.2341 2.1398 33 1 3.9330 0.3071 1.2497 34 1 6.0307 -0.7534 -0.4805 35 1 7.8543 -0.6457 -0.5685 36 1 10.3000 -0.6409 -0.5606 37 1 12.3083 -0.6783 -0.5375 38 1 14.8057 -1.0590 -0.2706 39 1 16.3348 -2.4012 1.7561 40 1 16.0869 -4.1950 -0.5132 41 1 17.1610 -5.1647 2.6066 42 1 15.0411 -4.4452 3.5584 43 1 10.2990 -4.1571 1.9013 44 1 7.8534 -4.1565 1.9014 45 1 3.9335 0.3073 -1.2488 46 1 3.9345 -1.2338 -2.1389 47 1 1.6767 -0.2075 -2.1392 48 1 1.6767 -1.7489 -1.2492 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13308390.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:45:32 Heat of formation + Delta-G solvation = -27.427793 kcal Electronic energy + Delta-G solvation = -27941.531247 eV Core-core repulsion = 24053.321905 eV Total energy + Delta-G solvation = -3888.209342 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.139 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.46604 -40.27443 -39.38440 -38.82112 -37.40882 -35.72098 -33.68884 -32.54111 -31.84917 -31.79201 -30.40930 -27.61294 -26.57577 -24.70002 -23.99962 -23.74960 -23.45117 -22.27840 -21.46734 -20.81681 -20.29293 -19.22843 -18.57395 -17.73205 -17.27262 -16.71006 -16.36847 -16.25619 -16.16213 -16.01716 -15.61466 -15.38353 -15.27977 -15.23273 -14.95632 -14.59627 -14.51748 -14.27763 -14.20696 -13.93843 -13.67311 -13.64417 -13.33928 -13.24293 -13.17900 -13.10308 -12.60331 -12.58436 -12.24407 -12.14521 -12.12638 -11.95890 -11.71420 -11.60803 -11.35518 -11.15347 -10.84597 -10.81360 -10.55890 -10.22734 -10.04308 -9.58943 -9.05527 -5.20489 -0.90314 0.24297 0.30898 0.34577 0.71822 1.17586 1.51406 1.58502 1.85094 2.02087 2.09567 2.84279 3.30362 3.39100 3.57557 3.60660 3.66564 3.67496 3.72536 3.77327 3.89261 4.03616 4.14009 4.15635 4.25835 4.30512 4.35856 4.40173 4.42850 4.47211 4.49418 4.52028 4.57163 4.71036 4.74817 4.85644 4.87868 4.93876 4.95357 5.00639 5.06142 5.11138 5.14575 5.19156 5.21624 5.24161 5.27684 5.27945 5.36049 5.42568 5.46849 5.52641 5.70132 6.41567 6.47452 7.21736 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.070 0.930 4 C -0.112 4.112 5 C -0.129 4.129 6 C 0.145 3.855 7 H 0.090 0.910 8 N -0.724 5.724 9 C 0.559 3.441 10 O -0.533 6.533 11 C -0.136 4.136 12 C -0.078 4.078 13 C -0.110 4.110 14 C 0.012 3.988 15 C -0.147 4.147 16 C -0.120 4.120 17 C -0.103 4.103 18 C -0.220 4.220 19 C -0.026 4.026 20 O -0.534 6.534 21 Si 0.651 3.349 22 S 0.133 5.867 23 C -0.120 4.120 24 C -0.049 4.049 25 C -0.127 4.127 26 C -0.111 4.111 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.065 0.935 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.064 0.936 34 H 0.399 0.601 35 H 0.130 0.870 36 H 0.134 0.866 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.124 0.876 40 H 0.381 0.619 41 H -0.232 1.232 42 H -0.237 1.237 43 H 0.131 0.869 44 H 0.142 0.858 45 H 0.068 0.932 46 H 0.070 0.930 47 H 0.068 0.932 48 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.397 1.862 -3.206 3.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.150 4.150 5 C -0.168 4.168 6 C 0.041 3.959 7 H 0.108 0.892 8 N -0.375 5.375 9 C 0.347 3.653 10 O -0.410 6.410 11 C -0.139 4.139 12 C -0.097 4.097 13 C -0.130 4.130 14 C 0.010 3.990 15 C -0.264 4.264 16 C -0.150 4.150 17 C -0.133 4.133 18 C -0.337 4.337 19 C -0.139 4.139 20 O -0.340 6.340 21 Si 0.551 3.449 22 S 0.400 5.600 23 C -0.139 4.139 24 C -0.068 4.068 25 C -0.165 4.165 26 C -0.149 4.149 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.084 0.916 31 H 0.085 0.915 32 H 0.087 0.913 33 H 0.082 0.918 34 H 0.234 0.766 35 H 0.148 0.852 36 H 0.152 0.848 37 H 0.162 0.838 38 H 0.163 0.837 39 H 0.141 0.859 40 H 0.229 0.771 41 H -0.155 1.155 42 H -0.161 1.161 43 H 0.148 0.852 44 H 0.159 0.841 45 H 0.087 0.913 46 H 0.088 0.912 47 H 0.087 0.913 48 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -0.460 0.046 -0.859 0.975 hybrid contribution 0.560 2.311 -1.201 2.664 sum 0.101 2.357 -2.060 3.132 Atomic orbital electron populations 1.21835 0.94968 1.02015 1.01832 1.21187 0.95745 0.99647 0.94744 0.91120 1.21563 0.94527 1.01145 0.97789 1.21923 0.96038 1.00714 0.98129 1.21049 0.78485 1.01174 0.95172 0.89180 1.46017 1.07466 1.30487 1.53538 1.18213 0.87097 0.81255 0.78731 1.90807 1.69812 1.37237 1.43179 1.20039 0.92899 0.98468 1.02512 1.20960 0.94297 0.97209 0.97264 1.20867 0.93869 0.98500 0.99719 1.18291 0.89084 0.95131 0.96492 1.23082 0.95741 1.01671 1.05918 1.20391 0.92737 1.00367 1.01543 1.19998 0.96022 0.97591 0.99732 1.25089 0.99088 1.02147 1.07382 1.24408 0.87683 1.08232 0.93618 1.86526 1.53372 1.60227 1.33836 0.94999 0.85606 0.82556 0.81761 1.84153 0.95817 1.29562 1.50493 1.20977 0.94263 0.98625 1.00002 1.20951 0.93517 0.96796 0.95546 1.21824 0.96771 1.00872 0.97021 1.21552 0.93956 1.01337 0.98050 0.92583 0.92600 0.92562 0.91582 0.91546 0.91316 0.91770 0.76586 0.85237 0.84836 0.83757 0.83658 0.85904 0.77115 1.15523 1.16135 0.85157 0.84067 0.91308 0.91152 0.91286 0.91489 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 9.19 37.16 0.34 0.50 16 2 C -0.09 0.11 2.72 -90.62 -0.25 -0.14 16 3 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 4 C -0.11 0.04 5.20 -26.73 -0.14 -0.10 16 5 C -0.13 -0.03 5.49 -26.73 -0.15 -0.18 16 6 C 0.15 0.00 2.45 -67.93 -0.17 -0.16 16 7 H 0.09 0.19 7.57 -51.93 -0.39 -0.21 16 8 N -0.72 0.17 5.03 -54.84 -0.28 -0.11 16 9 C 0.56 1.43 7.73 -12.46 -0.10 1.33 16 10 O -0.53 -3.34 15.99 5.28 0.08 -3.25 16 11 C -0.14 -0.16 5.88 -104.90 -0.62 -0.77 16 12 C -0.08 0.09 9.48 -39.59 -0.38 -0.29 16 13 C -0.11 0.10 9.48 -39.60 -0.38 -0.28 16 14 C 0.01 0.01 5.88 -104.91 -0.62 -0.61 16 15 C -0.15 -0.06 6.37 -36.94 -0.24 -0.29 16 16 C -0.12 0.04 9.64 -40.90 -0.39 -0.36 16 17 C -0.10 0.01 10.00 -41.32 -0.41 -0.40 16 18 C -0.22 0.02 5.73 -35.89 -0.21 -0.18 16 19 C -0.03 0.01 2.96 36.01 0.11 0.12 16 20 O -0.53 0.14 12.86 -35.23 -0.45 -0.31 16 21 Si 0.65 -0.64 30.96 -169.99 -5.26 -5.90 16 22 S 0.13 -0.02 19.46 -107.50 -2.09 -2.11 16 23 C -0.12 -0.07 9.54 -39.59 -0.38 -0.45 16 24 C -0.05 -0.07 9.53 -39.59 -0.38 -0.45 16 25 C -0.13 0.23 5.39 -26.71 -0.14 0.09 16 26 C -0.11 0.17 5.21 -26.71 -0.14 0.03 16 27 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 33 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.40 -1.16 6.61 -40.82 -0.27 -1.43 16 35 H 0.13 -0.51 6.38 -52.48 -0.34 -0.85 16 36 H 0.13 -0.39 6.74 -52.48 -0.35 -0.75 16 37 H 0.14 -0.32 6.88 -52.48 -0.36 -0.69 16 38 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 39 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 40 H 0.38 -1.50 8.70 45.56 0.40 -1.11 16 41 H -0.23 -0.37 7.11 56.52 0.40 0.03 16 42 H -0.24 -0.28 7.11 56.52 0.40 0.12 16 43 H 0.13 -0.08 7.26 -52.49 -0.38 -0.46 16 44 H 0.14 0.21 7.64 -52.49 -0.40 -0.19 16 45 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 46 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 47 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 397.90 15.07 6.00 6.00 Total: 0.00 -6.71 397.90 -13.83 -20.54 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -7.21 Total: -12.25 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -4.62 Total: -2.59 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.11 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.37 Total: -3.57 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.26 Total: -5.90 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.09 Total: -2.11 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -6.71 -13.83 -20.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13308390.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.890 kcal (2) G-P(sol) polarization free energy of solvation -6.712 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.602 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.826 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds