Wall clock time and date at job start Sun Mar 7 2021 19:45:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.08999 * 109.47343 * 2 1 4 4 C 1.52995 * 109.47005 * 120.00009 * 2 1 3 5 5 C 1.53009 * 109.47352 * 179.97438 * 4 2 1 6 6 C 1.52999 * 109.46847 * 300.00120 * 5 4 2 7 7 H 1.08999 * 109.47085 * 299.99815 * 6 5 4 8 8 N 1.46502 * 109.46923 * 179.97438 * 6 5 4 9 9 C 1.34774 * 119.99644 * 155.00279 * 8 6 5 10 10 O 1.21280 * 120.00512 * 359.97438 * 9 8 6 11 11 C 1.50707 * 119.99778 * 179.97438 * 9 8 6 12 12 C 1.53534 * 109.82082 * 280.00045 * 11 9 8 13 13 C 1.53039 * 108.56165 * 179.51157 * 12 11 9 14 14 C 1.50204 * 110.31772 * 49.56805 * 13 12 11 15 15 C 1.50698 * 118.54890 * 159.97167 * 14 13 12 16 16 O 1.42906 * 109.47347 * 69.97851 * 15 14 13 17 17 Si 1.86302 * 109.47503 * 189.97684 * 15 14 13 18 18 C 1.31114 * 122.90703 * 339.95067 * 14 13 12 19 19 N 1.38928 * 121.84889 * 0.40302 * 18 14 13 20 20 C 1.53003 * 109.47405 * 59.99707 * 6 5 4 21 21 C 1.52999 * 109.46979 * 239.99998 * 2 1 3 22 22 H 1.09003 * 109.47154 * 300.00080 * 1 2 3 23 23 H 1.09006 * 109.47065 * 59.99718 * 1 2 3 24 24 H 1.08999 * 109.47343 * 179.97438 * 1 2 3 25 25 H 1.09002 * 109.47222 * 60.00333 * 4 2 1 26 26 H 1.08996 * 109.47429 * 299.99800 * 4 2 1 27 27 H 1.08994 * 109.47048 * 180.02562 * 5 4 2 28 28 H 1.09002 * 109.46643 * 60.00030 * 5 4 2 29 29 H 0.96995 * 119.99880 * 335.00199 * 8 6 5 30 30 H 1.09003 * 109.80908 * 40.86455 * 11 9 8 31 31 H 1.08997 * 109.62468 * 59.78656 * 12 11 9 32 32 H 1.09000 * 109.77409 * 299.31807 * 12 11 9 33 33 H 1.09004 * 109.33250 * 289.31098 * 13 12 11 34 34 H 1.09000 * 109.19357 * 169.74190 * 13 12 11 35 35 H 1.08999 * 109.47124 * 309.98359 * 15 14 13 36 36 H 0.96699 * 113.99438 * 60.00095 * 16 15 14 37 37 H 1.48509 * 109.99573 * 58.68127 * 17 15 14 38 38 H 1.48495 * 109.99957 * 179.97438 * 17 15 14 39 39 H 1.08000 * 119.07878 * 180.13100 * 18 14 13 40 40 H 0.97000 * 120.55769 * 166.65985 * 19 18 14 41 41 H 1.09002 * 109.47054 * 59.99497 * 20 6 5 42 42 H 1.08996 * 109.47592 * 180.02562 * 20 6 5 43 43 H 1.09002 * 109.47425 * 299.99775 * 21 2 1 44 44 H 1.09002 * 109.47459 * 60.00387 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7212 1.2492 5 6 3.5700 -0.7218 1.2490 6 6 4.0795 -1.4435 -0.0003 7 1 3.7157 -2.4710 -0.0001 8 7 5.5445 -1.4435 -0.0008 9 6 6.2180 -2.3998 -0.6704 10 8 5.6114 -3.2606 -1.2720 11 6 7.7251 -2.3996 -0.6714 12 6 8.2448 -1.3786 -1.6936 13 6 9.7748 -1.3933 -1.6622 14 6 10.2848 -2.8028 -1.7592 15 6 11.7085 -3.0247 -2.2007 16 8 12.5998 -2.5836 -1.1744 17 14 11.9830 -4.8388 -2.5239 18 6 9.5464 -3.8486 -1.4764 19 7 8.2235 -3.7239 -1.0707 20 6 3.5695 -0.7222 -1.2496 21 6 2.0399 -0.7212 -1.2492 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 1.6766 -1.7489 1.2492 26 1 1.6767 -0.2074 2.1392 27 1 3.9333 -1.2361 2.1387 28 1 3.9337 0.3057 1.2488 29 1 6.0297 -0.7553 0.4806 30 1 8.0951 -2.1486 0.3227 31 1 7.8829 -0.3838 -1.4338 32 1 7.8966 -1.6458 -2.6914 33 1 10.1209 -0.9479 -0.7294 34 1 10.1561 -0.8130 -2.5024 35 1 11.8980 -2.4601 -3.1136 36 1 12.4874 -3.0439 -0.3314 37 1 11.0403 -5.3171 -3.5670 38 1 13.3832 -5.0707 -2.9606 39 1 9.9772 -4.8350 -1.5655 40 1 7.6386 -4.4974 -1.0515 41 1 3.9331 0.3053 -1.2498 42 1 3.9320 -1.2365 -2.1396 43 1 1.6766 -1.7489 -1.2493 44 1 1.6767 -0.2074 -2.1393 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_15413834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:45:58 Heat of formation + Delta-G solvation = -69.644127 kcal Electronic energy + Delta-G solvation = -22724.531771 eV Core-core repulsion = 19449.270476 eV Total energy + Delta-G solvation = -3275.261295 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.178 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.54344 -40.10949 -39.04730 -37.30501 -35.77334 -33.31549 -33.21333 -31.91984 -31.84493 -27.93274 -26.50155 -25.35941 -23.85576 -23.72543 -22.40884 -21.58343 -20.85542 -19.35696 -19.10837 -17.95143 -17.44596 -16.87326 -16.36057 -16.16180 -15.80120 -15.62854 -15.33035 -15.28034 -15.20016 -14.91983 -14.55584 -14.24774 -14.03320 -13.99201 -13.70128 -13.30798 -13.24382 -13.04220 -12.95646 -12.63117 -12.19485 -12.12201 -12.02328 -11.96607 -11.84225 -11.73063 -11.40274 -11.28345 -11.19763 -10.76435 -10.14609 -10.11916 -8.48233 -4.97440 1.33794 1.43200 1.49371 1.70387 1.85451 2.08319 2.59800 3.43507 3.57776 3.60330 3.64932 3.75501 3.81294 3.84615 3.95477 3.98454 4.09986 4.25109 4.30655 4.34712 4.37579 4.42221 4.46530 4.57842 4.66565 4.68471 4.69605 4.70892 4.83870 4.89748 4.95240 4.96398 5.06035 5.08948 5.15285 5.17821 5.23015 5.26055 5.30430 5.39914 5.45933 5.53720 6.20060 6.38869 6.76323 6.81952 7.08023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.111 4.111 5 C -0.126 4.126 6 C 0.145 3.855 7 H 0.089 0.911 8 N -0.723 5.723 9 C 0.513 3.487 10 O -0.530 6.530 11 C 0.137 3.863 12 C -0.128 4.128 13 C -0.051 4.051 14 C -0.281 4.281 15 C -0.042 4.042 16 O -0.548 6.548 17 Si 0.665 3.335 18 C 0.145 3.855 19 N -0.732 5.732 20 C -0.129 4.129 21 C -0.113 4.113 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.066 0.934 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.402 0.598 30 H 0.092 0.908 31 H 0.078 0.922 32 H 0.075 0.925 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.104 0.896 36 H 0.375 0.625 37 H -0.260 1.260 38 H -0.258 1.258 39 H 0.133 0.867 40 H 0.409 0.591 41 H 0.064 0.936 42 H 0.067 0.933 43 H 0.065 0.935 44 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.852 1.787 4.654 5.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.041 3.959 7 H 0.107 0.893 8 N -0.374 5.374 9 C 0.298 3.702 10 O -0.406 6.406 11 C 0.028 3.972 12 C -0.166 4.166 13 C -0.088 4.088 14 C -0.291 4.291 15 C -0.154 4.154 16 O -0.353 6.353 17 Si 0.568 3.432 18 C 0.025 3.975 19 N -0.365 5.365 20 C -0.168 4.168 21 C -0.151 4.151 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.085 0.915 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.236 0.764 30 H 0.109 0.891 31 H 0.097 0.903 32 H 0.093 0.907 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.121 0.879 36 H 0.221 0.779 37 H -0.185 1.185 38 H -0.183 1.183 39 H 0.150 0.850 40 H 0.246 0.754 41 H 0.083 0.917 42 H 0.086 0.914 43 H 0.084 0.916 44 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -1.904 1.048 3.188 3.858 hybrid contribution -0.143 0.609 -0.090 0.632 sum -2.047 1.657 3.098 4.067 Atomic orbital electron populations 1.21837 0.94948 1.02020 1.01875 1.21183 0.95773 0.99656 0.94686 0.91084 1.21551 0.93975 1.01319 0.98095 1.21814 0.96764 1.00930 0.96940 1.21053 0.78484 1.01095 0.95245 0.89302 1.46049 1.07520 1.30506 1.53340 1.20611 0.89686 0.81401 0.78521 1.90736 1.69933 1.37302 1.42618 1.20992 0.90188 0.86282 0.99787 1.21875 0.97425 0.97974 0.99359 1.19929 0.92617 0.93848 1.02401 1.20959 0.97545 0.95123 1.15468 1.24716 0.87437 1.10004 0.93276 1.86478 1.58994 1.66222 1.23566 0.95371 0.80469 0.78521 0.88800 1.20310 0.84588 0.97247 0.95360 1.44286 1.09786 1.08520 1.73900 1.21909 0.96101 1.00727 0.98026 1.21557 0.94518 1.01131 0.97854 0.92561 0.92565 0.92570 0.91539 0.91234 0.91145 0.91216 0.76384 0.89066 0.90332 0.90668 0.91192 0.90998 0.87872 0.77855 1.18508 1.18327 0.84984 0.75372 0.91705 0.91439 0.91640 0.91527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 9.19 37.16 0.34 0.55 16 2 C -0.09 0.14 2.72 -90.62 -0.25 -0.10 16 3 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 4 C -0.11 0.22 5.20 -26.73 -0.14 0.08 16 5 C -0.13 0.31 5.39 -26.73 -0.14 0.17 16 6 C 0.15 -0.13 2.45 -67.93 -0.17 -0.30 16 7 H 0.09 0.11 7.58 -51.93 -0.39 -0.28 16 8 N -0.72 1.24 5.08 -53.80 -0.27 0.97 16 9 C 0.51 0.32 7.06 -10.98 -0.08 0.24 16 10 O -0.53 -2.42 15.72 5.56 0.09 -2.33 16 11 C 0.14 -0.12 3.36 -68.51 -0.23 -0.36 16 12 C -0.13 0.11 5.47 -26.43 -0.14 -0.03 16 13 C -0.05 0.01 5.85 -28.10 -0.16 -0.15 16 14 C -0.28 -0.04 5.37 -101.34 -0.54 -0.58 16 15 C -0.04 -0.02 2.81 36.00 0.10 0.08 16 16 O -0.55 -0.48 12.88 -35.23 -0.45 -0.94 16 17 Si 0.67 -0.15 29.72 -169.99 -5.05 -5.20 16 18 C 0.15 -0.06 9.62 -16.08 -0.15 -0.22 16 19 N -0.73 0.01 5.47 -55.34 -0.30 -0.29 16 20 C -0.13 0.06 5.49 -26.75 -0.15 -0.09 16 21 C -0.11 0.09 5.20 -26.76 -0.14 -0.05 16 22 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 23 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.40 -1.73 8.60 -40.82 -0.35 -2.08 16 30 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.10 0.14 7.96 -51.93 -0.41 -0.27 16 36 H 0.37 -1.14 8.70 45.56 0.40 -0.75 16 37 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 38 H -0.26 -0.86 7.11 56.52 0.40 -0.46 16 39 H 0.13 -0.30 4.49 -52.49 -0.24 -0.53 16 40 H 0.41 0.10 8.08 -40.82 -0.33 -0.23 16 41 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 42 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 43 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 342.11 15.07 5.16 5.16 Total: 0.00 -6.39 342.11 -10.41 -16.80 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -7.71 Total: -13.40 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -1.86 Total: -0.76 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.58 Total: 0.68 kcal Atomic # 8 Polarization: -2.90 SS G_CDS: -0.37 Total: -3.27 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.05 Total: -5.20 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -6.39 -10.41 -16.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_15413834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.845 kcal (2) G-P(sol) polarization free energy of solvation -6.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds