Wall clock time and date at job start Sun Mar 7 2021 19:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.09000 * 109.47089 * 2 1 4 4 C 1.53002 * 109.46628 * 120.00130 * 2 1 3 5 5 C 1.53006 * 109.46628 * 180.02562 * 4 2 1 6 6 C 1.52993 * 109.47028 * 299.99857 * 5 4 2 7 7 H 1.09000 * 109.47196 * 299.99948 * 6 5 4 8 8 N 1.46506 * 109.47171 * 180.02562 * 6 5 4 9 9 C 1.34773 * 119.99968 * 84.99494 * 8 6 5 10 10 O 1.21283 * 120.00360 * 359.73034 * 9 8 6 11 11 C 1.50706 * 120.00081 * 180.02562 * 9 8 6 12 12 O 1.42894 * 109.47263 * 179.72605 * 11 9 8 13 13 C 1.35898 * 116.99879 * 179.97438 * 12 11 9 14 14 C 1.38734 * 120.05666 * 359.72678 * 13 12 11 15 15 C 1.38147 * 119.94132 * 179.70263 * 14 13 12 16 16 C 1.38260 * 120.05911 * 0.59143 * 15 14 13 17 17 C 1.50694 * 119.94683 * 179.70200 * 16 15 14 18 18 O 1.42901 * 109.47172 * 119.98419 * 17 16 15 19 19 Si 1.86296 * 109.47134 * 359.97438 * 17 16 15 20 20 C 1.38271 * 120.10844 * 359.68519 * 16 15 14 21 21 C 1.38144 * 120.05655 * 0.02562 * 20 16 15 22 22 C 1.52994 * 109.47383 * 60.00370 * 6 5 4 23 23 C 1.52992 * 109.47043 * 239.99591 * 2 1 3 24 24 H 1.09000 * 109.47089 * 180.02562 * 1 2 3 25 25 H 1.08993 * 109.46911 * 300.00517 * 1 2 3 26 26 H 1.09004 * 109.46419 * 60.00205 * 1 2 3 27 27 H 1.09002 * 109.46998 * 299.99145 * 4 2 1 28 28 H 1.09000 * 109.47491 * 60.00117 * 4 2 1 29 29 H 1.09007 * 109.46917 * 179.97438 * 5 4 2 30 30 H 1.09000 * 109.47089 * 59.99870 * 5 4 2 31 31 H 0.96998 * 119.99507 * 265.00350 * 8 6 5 32 32 H 1.09001 * 109.46564 * 299.73030 * 11 9 8 33 33 H 1.08998 * 109.47012 * 59.72084 * 11 9 8 34 34 H 1.08002 * 120.02646 * 359.97438 * 14 13 12 35 35 H 1.08001 * 119.96878 * 180.32114 * 15 14 13 36 36 H 1.08998 * 109.47471 * 239.97975 * 17 16 15 37 37 H 0.96701 * 114.00181 * 180.02562 * 18 17 16 38 38 H 1.48501 * 109.99945 * 59.99910 * 19 17 16 39 39 H 1.48505 * 110.00013 * 181.31943 * 19 17 16 40 40 H 1.08005 * 119.96790 * 180.02562 * 20 16 15 41 41 H 1.08003 * 120.02296 * 180.02562 * 21 20 16 42 42 H 1.09000 * 109.47299 * 59.99641 * 22 6 5 43 43 H 1.09006 * 109.47305 * 179.97438 * 22 6 5 44 44 H 1.09004 * 109.47346 * 60.00771 * 23 2 1 45 45 H 1.08992 * 109.47696 * 300.00448 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0399 -0.7213 1.2493 5 6 3.5700 -0.7208 1.2496 6 6 4.0805 -1.4416 0.0004 7 1 3.7175 -2.4694 0.0002 8 7 5.5455 -1.4416 0.0010 9 6 6.2191 -2.3979 0.6705 10 8 5.6125 -3.2556 1.2766 11 6 7.7262 -2.3976 0.6716 12 8 8.2022 -3.4977 1.4495 13 6 9.5494 -3.6431 1.5528 14 6 10.3958 -2.7487 0.9138 15 6 11.7650 -2.8951 1.0254 16 6 12.2920 -3.9391 1.7630 17 6 13.7859 -4.1003 1.8776 18 8 14.1693 -4.0232 3.2520 19 14 14.6320 -2.7450 0.9196 20 6 11.4505 -4.8351 2.3961 21 6 10.0806 -4.6896 2.2925 22 6 3.5706 -0.7204 -1.2488 23 6 2.0400 -0.7213 -1.2491 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8899 26 1 -0.3632 0.5138 -0.8901 27 1 1.6767 -0.2074 2.1393 28 1 1.6766 -1.7490 1.2493 29 1 3.9333 -1.2342 2.1399 30 1 3.9330 0.3070 1.2498 31 1 6.0307 -0.7533 -0.4804 32 1 8.0902 -2.4914 -0.3515 33 1 8.0890 -1.4642 1.1021 34 1 9.9847 -1.9361 0.3332 35 1 12.4243 -2.1961 0.5324 36 1 14.0789 -5.0689 1.4725 37 1 15.1200 -4.1187 3.4011 38 1 14.2407 -1.4192 1.4620 39 1 16.1056 -2.9112 0.9983 40 1 11.8646 -5.6496 2.9721 41 1 9.4238 -5.3896 2.7876 42 1 3.9336 0.3074 -1.2486 43 1 3.9347 -1.2337 -2.1388 44 1 1.6768 -0.2075 -2.1392 45 1 1.6767 -1.7489 -1.2492 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:46:09 Heat of formation + Delta-G solvation = -91.047548 kcal Electronic energy + Delta-G solvation = -24491.512145 eV Core-core repulsion = 20861.151786 eV Total energy + Delta-G solvation = -3630.360360 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.166 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.55757 -40.83454 -39.49868 -38.72500 -37.28339 -35.70274 -32.70920 -32.16461 -31.83786 -31.76720 -29.57975 -26.80006 -26.06176 -24.01381 -23.81757 -22.56133 -22.02654 -21.54393 -20.77929 -19.44916 -18.57083 -18.33387 -17.43455 -17.32358 -16.93031 -16.72452 -16.03371 -15.70377 -15.52854 -15.32613 -15.27861 -15.22354 -14.89862 -14.43054 -14.30704 -14.06682 -13.92851 -13.72934 -13.52515 -13.38244 -13.27400 -13.20521 -12.62383 -12.46601 -12.18951 -12.15193 -12.00367 -11.88795 -11.75428 -11.68618 -11.37632 -11.17828 -10.79910 -10.49654 -10.12188 -9.99013 -9.16121 -4.99377 0.33008 0.35175 1.27178 1.46395 1.51885 1.57196 1.93703 2.56822 2.66015 3.33893 3.45312 3.60438 3.63659 3.73343 3.82024 3.85861 3.87143 3.90594 3.95204 4.00843 4.12767 4.28829 4.32928 4.38571 4.39775 4.44348 4.48962 4.49757 4.67674 4.69505 4.71639 4.86077 4.92243 4.97597 4.99221 5.08516 5.11571 5.18278 5.19786 5.25294 5.29050 5.32812 5.41448 5.48502 5.55768 5.71577 6.26029 6.40408 6.44406 7.12236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.113 4.113 5 C -0.130 4.130 6 C 0.147 3.853 7 H 0.090 0.910 8 N -0.725 5.725 9 C 0.516 3.484 10 O -0.512 6.512 11 C 0.039 3.961 12 O -0.288 6.288 13 C 0.134 3.866 14 C -0.206 4.206 15 C -0.073 4.073 16 C -0.111 4.111 17 C -0.071 4.071 18 O -0.537 6.537 19 Si 0.679 3.321 20 C -0.050 4.050 21 C -0.146 4.146 22 C -0.126 4.126 23 C -0.111 4.111 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.066 0.934 28 H 0.066 0.934 29 H 0.068 0.932 30 H 0.064 0.936 31 H 0.401 0.599 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.076 0.924 37 H 0.379 0.621 38 H -0.256 1.256 39 H -0.261 1.261 40 H 0.133 0.867 41 H 0.136 0.864 42 H 0.069 0.931 43 H 0.070 0.930 44 H 0.069 0.931 45 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.997 3.307 -5.509 6.502 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.151 4.151 5 C -0.169 4.169 6 C 0.043 3.957 7 H 0.108 0.892 8 N -0.378 5.378 9 C 0.300 3.700 10 O -0.385 6.385 11 C -0.039 4.039 12 O -0.200 6.200 13 C 0.088 3.912 14 C -0.224 4.224 15 C -0.091 4.091 16 C -0.111 4.111 17 C -0.181 4.181 18 O -0.344 6.344 19 Si 0.581 3.419 20 C -0.068 4.068 21 C -0.164 4.164 22 C -0.164 4.164 23 C -0.149 4.149 24 H 0.075 0.925 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.085 0.915 28 H 0.084 0.916 29 H 0.087 0.913 30 H 0.083 0.917 31 H 0.235 0.765 32 H 0.113 0.887 33 H 0.112 0.888 34 H 0.150 0.850 35 H 0.147 0.853 36 H 0.094 0.906 37 H 0.227 0.773 38 H -0.180 1.180 39 H -0.187 1.187 40 H 0.151 0.849 41 H 0.154 0.846 42 H 0.088 0.912 43 H 0.089 0.911 44 H 0.088 0.912 45 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.303 3.299 -4.868 5.889 hybrid contribution 1.018 0.225 0.668 1.238 sum 1.321 3.524 -4.201 5.640 Atomic orbital electron populations 1.21837 0.94949 1.02037 1.01854 1.21189 0.95778 0.99641 0.94710 0.91098 1.21568 0.94467 1.01191 0.97838 1.21931 0.96136 1.00729 0.98089 1.21055 0.78079 1.01253 0.95291 0.89168 1.45925 1.07573 1.30413 1.53924 1.20039 0.88725 0.81789 0.79405 1.90785 1.69683 1.36641 1.41415 1.22485 0.92895 0.90994 0.97565 1.86171 1.19048 1.46998 1.67804 1.19064 0.81739 0.94907 0.95479 1.21138 0.93877 1.01892 1.05537 1.20709 0.94577 0.96246 0.97541 1.19164 0.93508 0.97169 1.01276 1.24732 0.96305 1.08832 0.88226 1.86595 1.28848 1.95493 1.23446 0.95195 0.79258 0.78113 0.89372 1.20831 0.91623 0.98164 0.96172 1.20513 0.95206 0.98598 1.02097 1.21823 0.96788 1.00895 0.96909 1.21560 0.93925 1.01371 0.98087 0.92548 0.92566 0.92583 0.91498 0.91558 0.91303 0.91698 0.76459 0.88663 0.88782 0.84972 0.85251 0.90608 0.77295 1.18031 1.18675 0.84893 0.84606 0.91223 0.91111 0.91237 0.91473 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 9.19 37.16 0.34 0.52 16 2 C -0.09 0.13 2.72 -90.62 -0.25 -0.12 16 3 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 4 C -0.11 0.06 5.20 -26.73 -0.14 -0.08 16 5 C -0.13 0.02 5.49 -26.73 -0.15 -0.13 16 6 C 0.15 -0.08 2.45 -67.93 -0.17 -0.25 16 7 H 0.09 0.15 7.58 -51.93 -0.39 -0.24 16 8 N -0.73 1.05 5.08 -53.81 -0.27 0.78 16 9 C 0.52 0.84 7.87 -10.98 -0.09 0.75 16 10 O -0.51 -3.40 16.16 -14.36 -0.23 -3.63 16 11 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 12 O -0.29 -0.94 9.67 -39.33 -0.38 -1.32 16 13 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 14 C -0.21 -0.07 9.04 -39.43 -0.36 -0.42 16 15 C -0.07 -0.03 8.66 -39.61 -0.34 -0.38 16 16 C -0.11 -0.16 5.42 -104.60 -0.57 -0.73 16 17 C -0.07 -0.01 2.81 36.00 0.10 0.10 16 18 O -0.54 -0.76 12.74 -35.23 -0.45 -1.20 16 19 Si 0.68 -0.64 29.78 -169.99 -5.06 -5.70 16 20 C -0.05 -0.10 9.60 -39.60 -0.38 -0.48 16 21 C -0.15 -0.36 9.99 -39.43 -0.39 -0.76 16 22 C -0.13 0.30 5.39 -26.70 -0.14 0.16 16 23 C -0.11 0.20 5.21 -26.70 -0.14 0.06 16 24 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 25 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.07 0.14 8.14 -51.92 -0.42 -0.28 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.40 -1.88 8.60 -40.82 -0.35 -2.24 16 32 H 0.10 -0.33 7.65 -51.93 -0.40 -0.72 16 33 H 0.09 -0.29 7.68 -51.93 -0.40 -0.68 16 34 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 35 H 0.13 -0.22 4.87 -52.49 -0.26 -0.47 16 36 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.38 -0.98 8.74 45.56 0.40 -0.58 16 38 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 39 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 40 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 41 H 0.14 0.26 8.06 -52.48 -0.42 -0.17 16 42 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 43 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 44 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 LS Contribution 361.82 15.07 5.45 5.45 Total: 0.00 -8.83 361.82 -10.94 -19.77 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -7.26 Total: -12.61 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -2.74 Total: -1.54 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.27 Total: 0.78 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -1.06 Total: -6.15 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.06 Total: -5.70 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.83 -10.94 -19.77 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.276 kcal (2) G-P(sol) polarization free energy of solvation -8.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.771 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.048 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds