Wall clock time and date at job start Sun Mar 7 2021 19:47:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35993 * 116.99687 * 2 1 4 4 C 1.39153 * 120.07026 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07556 * 359.97438 * 4 3 2 6 6 C 1.42900 * 117.00413 * 179.97438 * 5 4 3 7 7 C 1.50696 * 109.47362 * 180.02562 * 6 5 4 8 8 O 1.21287 * 120.00202 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99967 * 180.02562 * 7 6 5 10 10 C 1.46502 * 120.00134 * 180.02562 * 9 7 6 11 11 H 1.09002 * 109.46764 * 325.00255 * 10 9 7 12 12 C 1.52995 * 109.47255 * 84.99614 * 10 9 7 13 13 C 1.53000 * 109.47367 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.47139 * 300.00308 * 13 12 10 15 15 H 1.09007 * 109.47118 * 300.00200 * 14 13 12 16 16 C 1.53000 * 109.47139 * 180.02562 * 14 13 12 17 17 C 1.53003 * 109.47044 * 59.99724 * 14 13 12 18 18 C 1.52997 * 109.47098 * 299.99892 * 17 14 13 19 19 C 1.38563 * 119.85224 * 179.97438 * 4 3 2 20 20 C 1.38245 * 120.00301 * 359.72280 * 19 4 3 21 21 C 1.38261 * 120.14178 * 0.54753 * 20 19 4 22 22 C 1.50699 * 119.92538 * 179.72723 * 21 20 19 23 23 O 1.42892 * 109.47249 * 119.73101 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 359.72486 * 22 21 20 25 25 C 1.38242 * 120.14400 * 359.45608 * 21 20 19 26 26 H 1.08995 * 109.47278 * 300.00059 * 1 2 3 27 27 H 1.09002 * 109.46994 * 60.00277 * 1 2 3 28 28 H 1.09004 * 109.46734 * 179.97438 * 1 2 3 29 29 H 1.08992 * 109.47341 * 300.00830 * 6 5 4 30 30 H 1.09005 * 109.46619 * 60.00372 * 6 5 4 31 31 H 0.96999 * 119.99997 * 0.02562 * 9 7 6 32 32 H 1.09005 * 109.47426 * 300.00393 * 12 10 9 33 33 H 1.09003 * 109.46992 * 59.99883 * 12 10 9 34 34 H 1.08997 * 109.47242 * 180.02562 * 13 12 10 35 35 H 1.08990 * 109.47172 * 60.00205 * 13 12 10 36 36 H 1.08998 * 109.46871 * 299.99702 * 16 14 13 37 37 H 1.08997 * 109.47242 * 60.00227 * 16 14 13 38 38 H 1.09001 * 109.46566 * 179.97438 * 16 14 13 39 39 H 1.08998 * 109.46572 * 180.02562 * 17 14 13 40 40 H 1.08994 * 109.46589 * 59.99995 * 17 14 13 41 41 H 1.08990 * 109.47506 * 300.00065 * 18 17 14 42 42 H 1.08997 * 109.46963 * 179.97438 * 18 17 14 43 43 H 1.08008 * 119.99970 * 179.97438 * 19 4 3 44 44 H 1.07998 * 119.93124 * 180.29656 * 20 19 4 45 45 H 1.09004 * 109.46453 * 239.73169 * 22 21 20 46 46 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 47 47 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 48 48 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 49 49 H 1.07999 * 119.99645 * 180.29063 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1478 -0.0005 6 6 5.6003 0.3007 -0.0017 7 6 6.2519 -1.0581 -0.0021 8 8 5.5670 -2.0591 -0.0020 9 7 7.5957 -1.1610 -0.0027 10 6 8.2292 -2.4820 -0.0037 11 1 7.6274 -3.1739 0.5855 12 6 8.3358 -2.9954 -1.4410 13 6 8.9968 -4.3753 -1.4420 14 6 10.3963 -4.2708 -0.8327 15 1 10.9984 -3.5790 -1.4218 16 6 11.0575 -5.6506 -0.8343 17 6 10.2896 -3.7574 0.6047 18 6 9.6287 -2.3776 0.6057 19 6 4.0602 2.5234 -0.0011 20 6 3.3028 3.6799 -0.0069 21 6 1.9222 3.6058 -0.0007 22 6 1.1015 4.8696 -0.0008 23 8 0.2767 4.9018 -1.1673 24 14 2.2364 6.3470 -0.0016 25 6 1.2931 2.3748 -0.0001 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 5.9059 0.8502 -0.8920 30 1 5.9071 0.8509 0.8879 31 1 8.1435 -0.3605 -0.0024 32 1 7.3387 -3.0703 -1.8750 33 1 8.9375 -2.3035 -2.0303 34 1 9.0731 -4.7408 -2.4660 35 1 8.3947 -5.0670 -0.8529 36 1 10.4556 -6.3426 -0.2454 37 1 11.1335 -6.0158 -1.8584 38 1 12.0547 -5.5759 -0.4005 39 1 11.2867 -3.6826 1.0386 40 1 9.6875 -4.4491 1.1938 41 1 10.2307 -1.6859 0.0166 42 1 9.5523 -2.0120 1.6297 43 1 5.1386 2.5841 -0.0011 44 1 3.7906 4.6434 -0.0121 45 1 0.4730 4.8947 0.8894 46 1 0.7702 4.8821 -1.9986 47 1 3.1206 6.3077 -1.1941 48 1 1.4391 7.5999 -0.0011 49 1 0.2146 2.3196 0.0000 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:47:02 Heat of formation + Delta-G solvation = -123.559397 kcal Electronic energy + Delta-G solvation = -29000.727660 eV Core-core repulsion = 24894.737669 eV Total energy + Delta-G solvation = -4105.989990 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.78926 -41.05547 -39.72639 -38.99075 -38.77743 -37.00081 -35.67422 -32.58658 -31.90361 -31.81757 -31.41599 -29.52079 -28.42760 -26.74941 -26.11359 -23.83320 -23.61037 -22.63481 -22.21443 -21.52935 -20.77056 -19.75985 -18.63607 -18.31798 -17.95593 -17.49849 -17.19750 -17.02603 -16.60833 -16.15840 -16.02417 -15.84914 -15.78055 -15.45004 -15.30067 -15.20707 -15.10264 -14.67102 -14.28442 -14.25749 -13.76202 -13.68651 -13.53950 -13.47519 -13.26283 -13.19723 -12.62618 -12.59825 -12.54436 -12.18974 -12.14984 -12.13990 -12.00469 -11.97170 -11.72592 -11.65079 -11.36374 -11.16255 -10.76351 -10.63942 -10.09334 -9.77510 -8.84769 -4.98709 0.18056 0.30329 1.25784 1.47681 1.55582 1.57216 1.93872 2.32755 2.56030 2.57264 3.32959 3.46052 3.60480 3.63350 3.64946 3.77054 3.79612 3.87799 3.92497 3.95074 4.02140 4.12893 4.14145 4.26581 4.29818 4.34210 4.35046 4.41106 4.45726 4.50292 4.52961 4.58033 4.65850 4.70171 4.72904 4.86911 4.93511 4.98908 5.00632 5.09841 5.10705 5.12760 5.19636 5.26259 5.33984 5.37022 5.43266 5.49664 5.56367 5.98032 6.37457 6.38296 6.56050 7.16327 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.509 6.509 9 N -0.726 5.726 10 C 0.147 3.853 11 H 0.090 0.910 12 C -0.130 4.130 13 C -0.113 4.113 14 C -0.095 4.095 15 H 0.070 0.930 16 C -0.149 4.149 17 C -0.111 4.111 18 C -0.126 4.126 19 C -0.170 4.170 20 C -0.113 4.113 21 C -0.114 4.114 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.686 3.314 25 C -0.146 4.146 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.103 0.897 29 H 0.093 0.907 30 H 0.095 0.905 31 H 0.401 0.599 32 H 0.068 0.932 33 H 0.064 0.936 34 H 0.066 0.934 35 H 0.066 0.934 36 H 0.055 0.945 37 H 0.055 0.945 38 H 0.055 0.945 39 H 0.069 0.931 40 H 0.066 0.934 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.139 0.861 44 H 0.133 0.867 45 H 0.118 0.882 46 H 0.376 0.624 47 H -0.260 1.260 48 H -0.257 1.257 49 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.236 2.959 1.420 6.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.300 3.700 8 O -0.382 6.382 9 N -0.379 5.379 10 C 0.043 3.957 11 H 0.108 0.892 12 C -0.169 4.169 13 C -0.151 4.151 14 C -0.113 4.113 15 H 0.089 0.911 16 C -0.207 4.207 17 C -0.149 4.149 18 C -0.164 4.164 19 C -0.189 4.189 20 C -0.131 4.131 21 C -0.115 4.115 22 C -0.182 4.182 23 O -0.337 6.337 24 Si 0.587 3.413 25 C -0.165 4.165 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.121 0.879 29 H 0.111 0.889 30 H 0.112 0.888 31 H 0.235 0.765 32 H 0.087 0.913 33 H 0.083 0.917 34 H 0.085 0.915 35 H 0.084 0.916 36 H 0.075 0.925 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.088 0.912 40 H 0.085 0.915 41 H 0.088 0.912 42 H 0.089 0.911 43 H 0.157 0.843 44 H 0.150 0.850 45 H 0.136 0.864 46 H 0.224 0.776 47 H -0.184 1.184 48 H -0.182 1.182 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.497 2.552 1.450 5.370 hybrid contribution -0.127 0.333 -1.132 1.187 sum 4.371 2.884 0.318 5.246 Atomic orbital electron populations 1.23131 0.78128 1.04398 1.01360 1.86252 1.21324 1.25333 1.88538 1.18284 0.89024 0.85569 1.01055 1.18289 0.88321 0.85797 1.01695 1.86280 1.16090 1.27721 1.88803 1.22493 0.81241 0.96417 1.03919 1.20019 0.82553 0.90500 0.76925 1.90797 1.62615 1.37983 1.46788 1.45920 1.05805 1.09777 1.76410 1.21048 0.93650 0.83831 0.97143 0.89178 1.21930 1.01515 0.97190 0.96240 1.21565 0.95565 0.96588 1.01348 1.21189 0.96443 0.97441 0.96236 0.91112 1.21835 1.00477 0.96410 1.01951 1.21550 1.00911 0.95632 0.96855 1.21809 0.94654 0.98636 1.01296 1.20991 1.00463 0.90672 1.06734 1.20688 0.92845 0.97880 1.01663 1.19983 0.93704 0.95088 1.02683 1.25010 1.00219 1.01813 0.91189 1.86592 1.35610 1.95714 1.15753 0.94995 0.80382 0.76377 0.89520 1.20933 1.00400 0.90394 1.04792 0.92505 0.92544 0.87879 0.88897 0.88754 0.76507 0.91308 0.91712 0.91512 0.91561 0.92548 0.92573 0.92592 0.91249 0.91480 0.91236 0.91117 0.84304 0.85012 0.86372 0.77605 1.18447 1.18249 0.84170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.37 10.28 -34.22 -0.35 -1.72 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 4 C 0.10 0.30 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.14 9.45 -47.33 -0.45 -1.59 16 6 C 0.04 -0.02 5.22 36.00 0.19 0.17 16 7 C 0.52 1.01 7.87 -10.99 -0.09 0.93 16 8 O -0.51 -3.66 16.16 -14.36 -0.23 -3.89 16 9 N -0.73 0.93 5.08 -53.81 -0.27 0.66 16 10 C 0.15 -0.06 2.45 -67.93 -0.17 -0.22 16 11 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 12 C -0.13 0.00 5.49 -26.73 -0.15 -0.15 16 13 C -0.11 0.05 5.20 -26.73 -0.14 -0.09 16 14 C -0.09 0.12 2.72 -90.62 -0.25 -0.12 16 15 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 16 C -0.15 0.17 9.19 37.16 0.34 0.51 16 17 C -0.11 0.19 5.21 -26.73 -0.14 0.05 16 18 C -0.13 0.29 5.39 -26.73 -0.14 0.14 16 19 C -0.17 0.03 9.04 -39.46 -0.36 -0.32 16 20 C -0.11 0.06 8.66 -39.57 -0.34 -0.28 16 21 C -0.11 -0.04 5.39 -104.61 -0.56 -0.61 16 22 C -0.07 0.03 2.82 36.01 0.10 0.13 16 23 O -0.53 -0.58 12.77 -35.23 -0.45 -1.03 16 24 Si 0.69 -0.90 29.78 -169.99 -5.06 -5.97 16 25 C -0.15 -0.23 8.60 -39.46 -0.34 -0.57 16 26 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 27 H 0.06 -0.03 7.66 -51.93 -0.40 -0.42 16 28 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.09 -0.29 7.66 -51.93 -0.40 -0.69 16 30 H 0.09 -0.31 7.66 -51.93 -0.40 -0.71 16 31 H 0.40 -1.85 8.60 -40.82 -0.35 -2.20 16 32 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 33 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.14 -0.46 6.30 -52.48 -0.33 -0.79 16 44 H 0.13 -0.36 4.87 -52.49 -0.26 -0.62 16 45 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 46 H 0.38 -0.60 8.70 45.56 0.40 -0.21 16 47 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 48 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 49 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 391.01 15.07 5.89 5.89 Total: 0.00 -9.79 391.01 -10.46 -20.25 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -7.96 Total: -13.31 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -1.57 Total: 0.71 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: -0.27 Total: 0.66 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -1.48 Total: -8.23 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.97 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -9.79 -10.46 -20.25 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.308 kcal (2) G-P(sol) polarization free energy of solvation -9.791 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds