Wall clock time and date at job start Sun Mar 7 2021 19:47:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08992 * 109.47280 * 2 1 4 4 C 1.53002 * 109.46978 * 119.99927 * 2 1 3 5 5 C 1.52997 * 109.46978 * 180.02562 * 4 2 1 6 6 C 1.53006 * 109.47164 * 299.99874 * 5 4 2 7 7 H 1.08998 * 109.46505 * 299.99708 * 6 5 4 8 8 N 1.46500 * 109.47249 * 180.02562 * 6 5 4 9 9 C 1.34770 * 120.00256 * 84.99846 * 8 6 5 10 10 O 1.21696 * 120.00262 * 359.97438 * 9 8 6 11 11 C 1.46677 * 120.00037 * 179.97438 * 9 8 6 12 12 C 1.37871 * 126.23212 * 179.68498 * 11 9 8 13 13 C 1.39840 * 107.08576 * 179.84937 * 12 11 9 14 14 C 1.35457 * 107.86368 * 0.42062 * 13 12 11 15 15 C 1.50693 * 125.56375 * 179.76176 * 14 13 12 16 16 O 1.42906 * 109.47122 * 244.97508 * 15 14 13 17 17 Si 1.86292 * 109.47432 * 4.97553 * 15 14 13 18 18 N 1.35539 * 108.86715 * 359.73815 * 14 13 12 19 19 C 1.52997 * 109.47127 * 59.99836 * 6 5 4 20 20 C 1.52996 * 109.46975 * 239.99465 * 2 1 3 21 21 H 1.09001 * 109.47375 * 180.02562 * 1 2 3 22 22 H 1.09002 * 109.47045 * 300.00240 * 1 2 3 23 23 H 1.09000 * 109.47140 * 60.00147 * 1 2 3 24 24 H 1.09002 * 109.47097 * 299.99801 * 4 2 1 25 25 H 1.09001 * 109.47142 * 59.99766 * 4 2 1 26 26 H 1.09001 * 109.47375 * 59.99908 * 5 4 2 27 27 H 1.09000 * 109.47140 * 179.97438 * 5 4 2 28 28 H 0.97005 * 119.99374 * 264.99912 * 8 6 5 29 29 H 1.08002 * 126.46088 * 0.02562 * 12 11 9 30 30 H 1.07999 * 126.07247 * 180.16313 * 13 12 11 31 31 H 1.09006 * 109.47204 * 124.97799 * 15 14 13 32 32 H 0.96698 * 113.99905 * 180.02562 * 16 15 14 33 33 H 1.48505 * 110.00035 * 178.68063 * 17 15 14 34 34 H 1.48503 * 109.99962 * 300.00041 * 17 15 14 35 35 H 0.96999 * 125.67285 * 180.02562 * 18 14 13 36 36 H 1.09002 * 109.47153 * 180.02562 * 19 6 5 37 37 H 1.09001 * 109.46832 * 60.00321 * 19 6 5 38 38 H 1.09004 * 109.47368 * 60.00217 * 20 2 1 39 39 H 1.09001 * 109.47372 * 300.00372 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 3.5699 -0.7207 1.2496 6 6 4.0805 -1.4416 0.0003 7 1 3.7175 -2.4694 0.0003 8 7 5.5455 -1.4416 0.0009 9 6 6.2191 -2.3979 0.6704 10 8 5.6104 -3.2611 1.2749 11 6 7.6859 -2.3981 0.6705 12 6 8.5005 -3.3058 1.3134 13 6 9.8217 -2.9338 1.0455 14 6 9.7916 -1.8245 0.2688 15 6 10.9978 -1.0848 -0.2498 16 8 11.0379 0.2231 0.3248 17 14 12.5437 -2.0147 0.2146 18 7 8.4997 -1.4888 0.0338 19 6 3.5704 -0.7205 -1.2489 20 6 2.0399 -0.7214 -1.2492 21 1 -0.3634 -1.0277 0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 1.6766 -0.2074 2.1393 25 1 1.6766 -1.7489 1.2493 26 1 3.9329 0.3071 1.2498 27 1 3.9332 -1.2341 2.1398 28 1 6.0306 -0.7533 -0.4806 29 1 8.1790 -4.1473 1.9091 30 1 10.7086 -3.4387 1.3989 31 1 10.9350 -1.0031 -1.3350 32 1 11.7899 0.7572 0.0346 33 1 13.7385 -1.3121 -0.3185 34 1 12.6410 -2.1329 1.6917 35 1 8.1987 -0.7337 -0.4954 36 1 3.9338 -1.2343 -2.1389 37 1 3.9335 0.3073 -1.2487 38 1 1.6766 -0.2076 -2.1392 39 1 1.6765 -1.7490 -1.2491 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_6580494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:47:12 Heat of formation + Delta-G solvation = -40.913438 kcal Electronic energy + Delta-G solvation = -20144.867994 eV Core-core repulsion = 17053.701653 eV Total energy + Delta-G solvation = -3091.166341 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.146 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.54170 -40.84983 -39.22745 -37.81779 -35.84893 -32.77277 -31.98438 -31.80580 -31.23067 -27.56882 -26.19169 -23.84691 -23.34759 -22.13519 -21.46421 -21.31242 -20.77093 -19.53798 -18.64091 -17.42670 -16.98770 -16.45962 -15.98631 -15.84305 -15.27397 -15.25356 -15.17666 -14.92489 -14.75233 -14.19276 -14.14415 -13.99051 -13.60992 -13.54047 -13.26498 -13.17588 -12.72388 -12.58085 -12.14673 -12.03545 -11.97393 -11.75975 -11.38384 -11.22836 -11.10072 -10.63679 -10.26648 -10.09843 -9.29587 -4.83544 0.26655 1.21038 1.50867 1.65411 1.91172 2.00382 2.16895 2.24918 3.26744 3.57932 3.68077 3.74221 3.79463 3.90277 4.05052 4.14029 4.18897 4.25767 4.35230 4.39569 4.45360 4.48829 4.52364 4.74453 4.75568 4.92389 4.92944 4.95977 5.03739 5.07488 5.10335 5.14771 5.18769 5.29728 5.36927 5.39721 5.52625 5.58902 5.76066 6.25791 6.43265 6.53465 7.01519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.091 4.091 3 H 0.076 0.924 4 C -0.111 4.111 5 C -0.125 4.125 6 C 0.147 3.853 7 H 0.068 0.932 8 N -0.714 5.714 9 C 0.589 3.411 10 O -0.570 6.570 11 C -0.064 4.064 12 C -0.118 4.118 13 C -0.208 4.208 14 C 0.069 3.931 15 C -0.066 4.066 16 O -0.562 6.562 17 Si 0.788 3.212 18 N -0.512 5.512 19 C -0.118 4.118 20 C -0.111 4.111 21 H 0.052 0.948 22 H 0.054 0.946 23 H 0.061 0.939 24 H 0.066 0.934 25 H 0.056 0.944 26 H 0.072 0.928 27 H 0.042 0.958 28 H 0.408 0.592 29 H 0.147 0.853 30 H 0.165 0.835 31 H 0.107 0.893 32 H 0.401 0.599 33 H -0.279 1.279 34 H -0.300 1.300 35 H 0.428 0.572 36 H 0.076 0.924 37 H 0.083 0.917 38 H 0.080 0.920 39 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.245 3.516 -6.350 7.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.109 4.109 3 H 0.094 0.906 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.043 3.957 7 H 0.086 0.914 8 N -0.364 5.364 9 C 0.378 3.622 10 O -0.449 6.449 11 C -0.178 4.178 12 C -0.144 4.144 13 C -0.232 4.232 14 C -0.049 4.049 15 C -0.174 4.174 16 O -0.372 6.372 17 Si 0.692 3.308 18 N -0.110 5.110 19 C -0.156 4.156 20 C -0.149 4.149 21 H 0.071 0.929 22 H 0.073 0.927 23 H 0.080 0.920 24 H 0.085 0.915 25 H 0.075 0.925 26 H 0.091 0.909 27 H 0.061 0.939 28 H 0.244 0.756 29 H 0.165 0.835 30 H 0.182 0.818 31 H 0.125 0.875 32 H 0.253 0.747 33 H -0.206 1.206 34 H -0.227 1.227 35 H 0.268 0.732 36 H 0.095 0.905 37 H 0.102 0.898 38 H 0.099 0.901 39 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 1.901 2.865 -5.331 6.344 hybrid contribution 0.090 1.691 -0.044 1.694 sum 1.991 4.556 -5.374 7.322 Atomic orbital electron populations 1.21833 0.94879 1.01870 1.02073 1.21158 0.95794 0.99727 0.94259 0.90563 1.21547 0.93905 1.00843 0.98578 1.21865 0.96606 1.00742 0.97159 1.21045 0.78072 1.00315 0.96264 0.91354 1.45870 1.07785 1.29880 1.52894 1.17224 0.85267 0.81267 0.78473 1.90839 1.69241 1.39279 1.45550 1.20306 0.89958 0.98546 1.08995 1.21478 0.92367 0.99720 1.00881 1.20901 0.97946 0.99741 1.04593 1.20211 0.84380 0.97687 1.02665 1.24745 1.03134 0.88252 1.01283 1.86535 1.52863 1.25349 1.72491 0.93404 0.71393 0.87007 0.79024 1.41856 1.05217 1.23723 1.40171 1.21780 0.96650 1.01344 0.95837 1.21563 0.93961 1.01085 0.98244 0.92930 0.92696 0.91995 0.91515 0.92492 0.90889 0.93883 0.75566 0.83496 0.81810 0.87519 0.74742 1.20568 1.22736 0.73237 0.90488 0.89849 0.90142 0.92138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.31 9.19 71.98 0.66 0.97 16 2 C -0.09 0.20 2.72 -10.80 -0.03 0.17 16 3 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 4 C -0.11 -0.08 5.20 30.59 0.16 0.08 16 5 C -0.13 -0.28 5.49 30.60 0.17 -0.12 16 6 C 0.15 0.19 2.45 44.99 0.11 0.30 16 7 H 0.07 0.45 7.57 -2.39 -0.02 0.43 16 8 N -0.71 -0.56 5.07 -446.50 -2.27 -2.82 16 9 C 0.59 4.78 7.75 86.45 0.67 5.45 16 10 O -0.57 -9.51 16.54 -4.34 -0.07 -9.58 16 11 C -0.06 -0.36 7.06 40.35 0.28 -0.08 16 12 C -0.12 -0.79 10.65 22.57 0.24 -0.55 16 13 C -0.21 -0.58 9.32 22.01 0.21 -0.38 16 14 C 0.07 0.04 6.50 41.34 0.27 0.31 16 15 C -0.07 0.29 3.07 71.23 0.22 0.51 16 16 O -0.56 1.14 12.86 -148.98 -1.92 -0.77 16 17 Si 0.79 -3.68 30.56 68.60 2.10 -1.58 16 18 N -0.51 0.10 5.99 -171.94 -1.03 -0.93 16 19 C -0.12 0.49 5.39 30.61 0.17 0.65 16 20 C -0.11 0.37 5.21 30.61 0.16 0.53 16 21 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 22 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 23 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 24 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 25 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 26 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 27 H 0.04 0.34 8.14 -2.39 -0.02 0.32 16 28 H 0.41 -2.33 7.73 -92.70 -0.72 -3.05 16 29 H 0.15 1.03 8.06 -2.91 -0.02 1.01 16 30 H 0.16 -0.17 6.19 -2.91 -0.02 -0.19 16 31 H 0.11 -1.05 7.96 -2.38 -0.02 -1.07 16 32 H 0.40 -4.07 8.74 -74.06 -0.65 -4.72 16 33 H -0.28 0.37 7.11 99.48 0.71 1.08 16 34 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 35 H 0.43 -2.64 8.19 -92.71 -0.76 -3.40 16 36 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 37 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 38 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 Total: 0.00 -18.94 317.41 -0.93 -19.87 By element: Atomic # 1 Polarization: -11.01 SS G_CDS: -1.02 Total: -12.04 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 3.28 Total: 7.85 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -3.30 Total: -3.75 kcal Atomic # 8 Polarization: -8.36 SS G_CDS: -1.99 Total: -10.35 kcal Atomic # 14 Polarization: -3.68 SS G_CDS: 2.10 Total: -1.58 kcal Total: -18.94 -0.93 -19.87 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_6580494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.046 kcal (2) G-P(sol) polarization free energy of solvation -18.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.988 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.868 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds